BLASTX nr result

ID: Coptis25_contig00008230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008230
         (1810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147202.1| PREDICTED: scarecrow-like protein 27-like [C...   445   e-122
ref|XP_004169643.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-li...   442   e-121
ref|XP_002528940.1| conserved hypothetical protein [Ricinus comm...   432   e-118
ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vi...   431   e-118
ref|XP_002329873.1| GRAS family transcription factor [Populus tr...   428   e-117

>ref|XP_004147202.1| PREDICTED: scarecrow-like protein 27-like [Cucumis sativus]
          Length = 774

 Score =  445 bits (1144), Expect = e-122
 Identities = 230/361 (63%), Positives = 263/361 (72%), Gaps = 1/361 (0%)
 Frame = +2

Query: 485  FKAAELVETGNLLNAQGILARLNHQLSPVGKPLLRAAFLFKEALQLLLFTNSNNKGLCPP 664
            +KAAELV TGN  +AQGILARLNHQLSPVGKPL RAAF FKEALQLLL  N  N    PP
Sbjct: 416  YKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMN--NPVNPPP 473

Query: 665  QRTSTPFDVVHKINAYKTFSEVSPLLHFTNLTCNQAFLEALENYDRIHIVDFDIGFGGQW 844
             R  TPFDV+ K+ AYK FSE+SPL+ F N TCNQA LEAL++ DRIHIVDFDIGFG QW
Sbjct: 474  PRCPTPFDVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDIDRIHIVDFDIGFGAQW 533

Query: 845  SSFMQELRMRVGSTPSLKITTFVPPSLYDPTELNLTRENLTQFANEFGIPFEINFVXXXX 1024
            +SFMQEL +R    PSLKIT F  PS + P EL L RENLTQFAN+ GI FE   V    
Sbjct: 534  ASFMQELSLRNRGAPSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDS 593

Query: 1025 XXXXXXXXTI-NAFEGEAVAVNFPVGIXXXXXXXXXXXXRFVKQLSPKIVVSVDRGCDRS 1201
                        + E EAVAVNFP+              RF+KQLSPKIVVS+DRGCDRS
Sbjct: 594  LNQNSFSLPFPRSSENEAVAVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRS 653

Query: 1202 DLPFSQYVLHSLQSYSILLESLDAVNVNPDIVHKIEKFYLLPTIERSLLGCQYTPQKMPP 1381
            DLPF Q++L +LQSY  LLESLDA+N+N D V+KIE+F L P IE ++LG    P++MPP
Sbjct: 654  DLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPP 713

Query: 1382 WRNLFTSAGFSPITFSNFTETQAEYVLKRLPVRGFHIEKRNSSLMLCWQRRELASVSAWR 1561
            W+ LF SAGF+P+TFSNFTETQAE V KR  VRGFH+EKR +SL+LCWQRREL S SAWR
Sbjct: 714  WKTLFASAGFTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWR 773

Query: 1562 C 1564
            C
Sbjct: 774  C 774


>ref|XP_004169643.1| PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 27-like
            [Cucumis sativus]
          Length = 774

 Score =  442 bits (1137), Expect = e-121
 Identities = 229/361 (63%), Positives = 262/361 (72%), Gaps = 1/361 (0%)
 Frame = +2

Query: 485  FKAAELVETGNLLNAQGILARLNHQLSPVGKPLLRAAFLFKEALQLLLFTNSNNKGLCPP 664
            +KAAELV TGN  +AQGILARLNHQLSPVGKPL RAAF FKEALQLLL  N  N    PP
Sbjct: 416  YKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMN--NPVNPPP 473

Query: 665  QRTSTPFDVVHKINAYKTFSEVSPLLHFTNLTCNQAFLEALENYDRIHIVDFDIGFGGQW 844
             R  TPF V+ K+ AYK FSE+SPL+ F N TCNQA LEAL++ DRIHIVDFDIGFG QW
Sbjct: 474  PRCPTPFXVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDIDRIHIVDFDIGFGAQW 533

Query: 845  SSFMQELRMRVGSTPSLKITTFVPPSLYDPTELNLTRENLTQFANEFGIPFEINFVXXXX 1024
            +SFMQEL +R    PSLKIT F  PS + P EL L RENLTQFAN+ GI FE   V    
Sbjct: 534  ASFMQELSLRNRGAPSLKITAFASPSTHHPIELGLMRENLTQFANDIGISFEFEVVNFDS 593

Query: 1025 XXXXXXXXTI-NAFEGEAVAVNFPVGIXXXXXXXXXXXXRFVKQLSPKIVVSVDRGCDRS 1201
                        + E EAVAVNFP+              RF+KQLSPKIVVS+DRGCDRS
Sbjct: 594  LNQNSFSLPFPRSSENEAVAVNFPLWCSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRS 653

Query: 1202 DLPFSQYVLHSLQSYSILLESLDAVNVNPDIVHKIEKFYLLPTIERSLLGCQYTPQKMPP 1381
            DLPF Q++L +LQSY  LLESLDA+N+N D V+KIE+F L P IE ++LG    P++MPP
Sbjct: 654  DLPFPQHMLQALQSYINLLESLDAINMNSDAVNKIERFLLQPRIESTVLGRLRAPERMPP 713

Query: 1382 WRNLFTSAGFSPITFSNFTETQAEYVLKRLPVRGFHIEKRNSSLMLCWQRRELASVSAWR 1561
            W+ LF SAGF+P+TFSNFTETQAE V KR  VRGFH+EKR +SL+LCWQRREL S SAWR
Sbjct: 714  WKTLFASAGFTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVLCWQRRELISASAWR 773

Query: 1562 C 1564
            C
Sbjct: 774  C 774


>ref|XP_002528940.1| conserved hypothetical protein [Ricinus communis]
            gi|223531642|gb|EEF33469.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 787

 Score =  432 bits (1111), Expect = e-118
 Identities = 228/361 (63%), Positives = 265/361 (73%), Gaps = 1/361 (0%)
 Frame = +2

Query: 485  FKAAELVETGNLLNAQGILARLNHQLSPVGKPLLRAAFLFKEALQLLLFTNSNNKGLCPP 664
            +KAAELV TGN  +AQGILARLN QLSP+GKPL RAAF FKEALQLLL  N+N     PP
Sbjct: 430  YKAAELVGTGNFSHAQGILARLNQQLSPIGKPLHRAAFYFKEALQLLLLMNNNPVTSLPP 489

Query: 665  QRTSTPFDVVHKINAYKTFSEVSPLLHFTNLTCNQAFLEALENYDRIHIVDFDIGFGGQW 844
             R+ TPFDV+ K+ AYK FSEVSPL+ F N TCNQA LEAL   DRIHI+DFDIGFG QW
Sbjct: 490  -RSPTPFDVIFKLGAYKVFSEVSPLIQFVNFTCNQALLEALSEADRIHIIDFDIGFGAQW 548

Query: 845  SSFMQELRMRVGSTPSLKITTFVPPSLYDPTELNLTRENLTQFANEFGIPFEINFVXXXX 1024
            +SFMQEL    G+ PSLKIT F  PS + P E+ L RENLTQFANE GI FE++ +    
Sbjct: 549  ASFMQELPRNRGA-PSLKITAFASPSTHHPVEVLLMRENLTQFANEIGISFELDVINFDS 607

Query: 1025 XXXXXXXXTI-NAFEGEAVAVNFPVGIXXXXXXXXXXXXRFVKQLSPKIVVSVDRGCDRS 1201
                     I  + E EA+AV+FPV              RFVKQLSPKIVVS+DRG DR+
Sbjct: 608  LEQSCYSLPIFRSKENEAIAVHFPVWSASNQPAALPSLLRFVKQLSPKIVVSLDRG-DRT 666

Query: 1202 DLPFSQYVLHSLQSYSILLESLDAVNVNPDIVHKIEKFYLLPTIERSLLGCQYTPQKMPP 1381
            DLPF Q++LH+LQS+ +LLESLDAVNV  D V+KIEKF L P IE ++LG    P KMP 
Sbjct: 667  DLPFPQHILHALQSHILLLESLDAVNVASDAVNKIEKFLLQPRIESTVLGRLRAPDKMPT 726

Query: 1382 WRNLFTSAGFSPITFSNFTETQAEYVLKRLPVRGFHIEKRNSSLMLCWQRRELASVSAWR 1561
            W+ +F SAGFSP+TFSNFTETQAE V+KR PVRGFH+EKR +SL+LCWQRR+L S SAWR
Sbjct: 727  WKTIFASAGFSPVTFSNFTETQAECVVKRTPVRGFHVEKRQASLVLCWQRRDLISASAWR 786

Query: 1562 C 1564
            C
Sbjct: 787  C 787


>ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vitis vinifera]
          Length = 804

 Score =  431 bits (1109), Expect = e-118
 Identities = 224/392 (57%), Positives = 268/392 (68%), Gaps = 1/392 (0%)
 Frame = +2

Query: 392  LSTRPTMTTKPKXXXXXXXXXXXXXXXXXXX-FKAAELVETGNLLNAQGILARLNHQLSP 568
            L  RP M +KPK                    FKAAELVETGN + AQGILARLNHQLSP
Sbjct: 417  LQPRPAMGSKPKMVGEEMGHHQQYQQVIIDQLFKAAELVETGNTILAQGILARLNHQLSP 476

Query: 569  VGKPLLRAAFLFKEALQLLLFTNSNNKGLCPPQRTSTPFDVVHKINAYKTFSEVSPLLHF 748
            +GKP  RAAF FKEALQLLL +NSNN         S+PF ++ KI AYK+FSE+SPL+ F
Sbjct: 477  IGKPFQRAAFYFKEALQLLLHSNSNNTNPLATSPHSSPFSLIFKIGAYKSFSEISPLIQF 536

Query: 749  TNLTCNQAFLEALENYDRIHIVDFDIGFGGQWSSFMQELRMRVGSTPSLKITTFVPPSLY 928
             N TC QA LEALE +DRIHI+DFDIG+GGQW+S MQEL +R G  PSLKIT F   S +
Sbjct: 537  ANFTCIQAILEALEGFDRIHIIDFDIGYGGQWASLMQELALRNGGAPSLKITAFASLSNH 596

Query: 929  DPTELNLTRENLTQFANEFGIPFEINFVXXXXXXXXXXXXTINAFEGEAVAVNFPVGIXX 1108
            D  EL L RENL  FA E  + FE+  +             ++  E EAVAVN PVG   
Sbjct: 597  DQLELGLARENLNHFAGEINMAFELEIL----SLDSLNSLPLHLSENEAVAVNLPVGSFS 652

Query: 1109 XXXXXXXXXXRFVKQLSPKIVVSVDRGCDRSDLPFSQYVLHSLQSYSILLESLDAVNVNP 1288
                      R VKQLSPKI+VS+DRGCDR+DLP+S ++LH+ QSY  LLESLDAVNVN 
Sbjct: 653  NYPLPLPLVLRVVKQLSPKIMVSLDRGCDRTDLPYSHHILHAFQSYLALLESLDAVNVNS 712

Query: 1289 DIVHKIEKFYLLPTIERSLLGCQYTPQKMPPWRNLFTSAGFSPITFSNFTETQAEYVLKR 1468
            D + KIE+F L P IE+ +LG   +P+K PPWR L  S+GFSP+TFSNF+E+QAE ++KR
Sbjct: 713  DALQKIERFLLQPGIEKIVLGRHRSPEKTPPWRALLLSSGFSPLTFSNFSESQAECLVKR 772

Query: 1469 LPVRGFHIEKRNSSLMLCWQRRELASVSAWRC 1564
             PVRGFH+EKR SSL+LCWQR++L S SAWRC
Sbjct: 773  TPVRGFHVEKRQSSLVLCWQRKDLISASAWRC 804


>ref|XP_002329873.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222871110|gb|EEF08241.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 777

 Score =  428 bits (1101), Expect = e-117
 Identities = 226/362 (62%), Positives = 257/362 (70%), Gaps = 3/362 (0%)
 Frame = +2

Query: 488  KAAELVETGNLLNAQGILARLNHQLSPVGKPLLRAAFLFKEALQLLLFTNSNNKGLCPPQ 667
            KAAELV TGN L+AQGILARLN QLSP GKP  RAAF FKEALQLLL  N NN    PP 
Sbjct: 420  KAAELVGTGNFLHAQGILARLNQQLSPTGKPFHRAAFYFKEALQLLLLMN-NNSVTAPPP 478

Query: 668  RTSTPFDVVHKINAYKTFSEVSPLLHFTNLTCNQAFLEALENYDRIHIVDFDIGFGGQWS 847
            R+ TPFDV+ K++AYK  SEVSPL+ F N TCNQA LEA+++ D IHIVDFDIGFG QW+
Sbjct: 479  RSPTPFDVIFKMSAYKVLSEVSPLIQFVNFTCNQALLEAVDDADSIHIVDFDIGFGAQWA 538

Query: 848  SFMQELRMRVGSTPSLKITTFVPPSLYDPTELNLTRENLTQFANEFGIPFE---INFVXX 1018
            SFMQEL    G   SLK T F  PS + P EL L R+NLTQFANE G+ FE   INF   
Sbjct: 539  SFMQELPRNRG-VRSLKTTAFASPSTHHPVELGLMRDNLTQFANEIGLSFELDVINFDSL 597

Query: 1019 XXXXXXXXXXTINAFEGEAVAVNFPVGIXXXXXXXXXXXXRFVKQLSPKIVVSVDRGCDR 1198
                        N  E EAV VNFP+              RF+KQLSPKIVVS+DRGCDR
Sbjct: 598  EQNCYSLPFFRTN--ENEAVVVNFPIWCSSNQPSALPSLLRFIKQLSPKIVVSLDRGCDR 655

Query: 1199 SDLPFSQYVLHSLQSYSILLESLDAVNVNPDIVHKIEKFYLLPTIERSLLGCQYTPQKMP 1378
            SDLPF Q++LH+LQSY  LLESLDAVN   D V+KIE+F L P IE ++LG    P+KMP
Sbjct: 656  SDLPFPQHILHALQSYVHLLESLDAVNATTDAVNKIERFLLQPRIESTVLGRLRAPEKMP 715

Query: 1379 PWRNLFTSAGFSPITFSNFTETQAEYVLKRLPVRGFHIEKRNSSLMLCWQRRELASVSAW 1558
             W+ +F S GFSP+TFSNFTETQAE V+KR PVRGFH+EKR + L+LCWQRREL S SAW
Sbjct: 716  NWKTIFASVGFSPVTFSNFTETQAECVVKRTPVRGFHVEKRQALLVLCWQRRELMSASAW 775

Query: 1559 RC 1564
            RC
Sbjct: 776  RC 777


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