BLASTX nr result
ID: Coptis25_contig00008194
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00008194 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI25344.3| unnamed protein product [Vitis vinifera] 78 9e-13 emb|CAN82942.1| hypothetical protein VITISV_013130 [Vitis vinifera] 78 9e-13 ref|XP_002520891.1| conserved hypothetical protein [Ricinus comm... 70 1e-10 ref|XP_002275422.1| PREDICTED: UPF0176 protein Mfla_2319-like [V... 64 1e-08 ref|XP_002325492.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 >emb|CBI25344.3| unnamed protein product [Vitis vinifera] Length = 445 Score = 77.8 bits (190), Expect = 9e-13 Identities = 56/116 (48%), Positives = 64/116 (55%), Gaps = 11/116 (9%) Frame = -1 Query: 315 SPRML---SSFTTPNPNPKFSYPMKRTTLENSR--HVSNF------NKNFHEHLKPPLST 169 S RML SS PNPNP MK T E SR H+S F N N P T Sbjct: 13 SVRMLFSCSSHLCPNPNPSLHRTMKAAT-EASRTPHLSLFSNPMVPNSNSSSQAFPQSIT 71 Query: 168 VSVCQSCSLPISDAIEITTTPDLVQKSLVVVSFYKFADFPDHADLRKPLKALCEQV 1 +S C S + P S + + + SLVVVSFYKFADF DHADLRKPLKALCE++ Sbjct: 72 LSKCFSVT-PASPVVASEDSEVQSRDSLVVVSFYKFADFHDHADLRKPLKALCEEL 126 >emb|CAN82942.1| hypothetical protein VITISV_013130 [Vitis vinifera] Length = 500 Score = 77.8 bits (190), Expect = 9e-13 Identities = 56/116 (48%), Positives = 64/116 (55%), Gaps = 11/116 (9%) Frame = -1 Query: 315 SPRML---SSFTTPNPNPKFSYPMKRTTLENSR--HVSNF------NKNFHEHLKPPLST 169 S RML SS PNPNP MK T E SR H+S F N N P T Sbjct: 13 SVRMLFSCSSHLCPNPNPSLHRTMKAAT-EASRTPHLSLFSNPMVPNSNSSSQAFPQSIT 71 Query: 168 VSVCQSCSLPISDAIEITTTPDLVQKSLVVVSFYKFADFPDHADLRKPLKALCEQV 1 +S C S + P S + + + SLVVVSFYKFADF DHADLRKPLKALCE++ Sbjct: 72 LSKCFSVT-PASPVVASEDSEVQSRDSLVVVSFYKFADFHDHADLRKPLKALCEEL 126 >ref|XP_002520891.1| conserved hypothetical protein [Ricinus communis] gi|223540022|gb|EEF41600.1| conserved hypothetical protein [Ricinus communis] Length = 467 Score = 70.5 bits (171), Expect = 1e-10 Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 20/125 (16%) Frame = -1 Query: 315 SPRMLSSFTTPNPNPKFSYPMKRTTLENSRHVSNFNKNFHEHLKPPLSTVSVCQSCS-LP 139 S RM+SS ++ P+ + ++R L N + H+H PP ST+S S LP Sbjct: 12 SLRMISSASSSFPH---TLDLRRFLLSIKPSSQTPNSSSHQHHLPPFSTISPFDSLKKLP 68 Query: 138 ---------------ISDAIEITTTPDLVQK----SLVVVSFYKFADFPDHADLRKPLKA 16 + + I TP+L SLVVVSFYKFADFPDHAD+RKPLK Sbjct: 69 RNMTFPKCFSTYGAAATPPVPILDTPELNDPNPLTSLVVVSFYKFADFPDHADMRKPLKE 128 Query: 15 LCEQV 1 LCE++ Sbjct: 129 LCERL 133 >ref|XP_002275422.1| PREDICTED: UPF0176 protein Mfla_2319-like [Vitis vinifera] Length = 431 Score = 64.3 bits (155), Expect = 1e-08 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 6/88 (6%) Frame = -1 Query: 246 TTLENSRHVSNF------NKNFHEHLKPPLSTVSVCQSCSLPISDAIEITTTPDLVQKSL 85 T + H+S F N N P T+S C S + P S + + + SL Sbjct: 5 TEASRTPHLSLFSNPMVPNSNSSSQAFPQSITLSKCFSVT-PASPVVASEDSEVQSRDSL 63 Query: 84 VVVSFYKFADFPDHADLRKPLKALCEQV 1 VVVSFYKFADF DHADLRKPLKALCE++ Sbjct: 64 VVVSFYKFADFHDHADLRKPLKALCEEL 91 >ref|XP_002325492.1| predicted protein [Populus trichocarpa] gi|222862367|gb|EEE99873.1| predicted protein [Populus trichocarpa] Length = 396 Score = 62.0 bits (149), Expect = 5e-08 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 4/61 (6%) Frame = -1 Query: 171 TVSVCQSCSLPISDAIEITTTPDL----VQKSLVVVSFYKFADFPDHADLRKPLKALCEQ 4 TVS C S S P +D + I+ P + +LVVVSFYKFADFPD+AD+RKPLK LCE+ Sbjct: 2 TVSSCFSGS-PSTDQLSISGAPGSNNSNPESTLVVVSFYKFADFPDYADMRKPLKELCEE 60 Query: 3 V 1 + Sbjct: 61 L 61