BLASTX nr result

ID: Coptis25_contig00008194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008194
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25344.3| unnamed protein product [Vitis vinifera]               78   9e-13
emb|CAN82942.1| hypothetical protein VITISV_013130 [Vitis vinifera]    78   9e-13
ref|XP_002520891.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_002275422.1| PREDICTED: UPF0176 protein Mfla_2319-like [V...    64   1e-08
ref|XP_002325492.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>emb|CBI25344.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 56/116 (48%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
 Frame = -1

Query: 315 SPRML---SSFTTPNPNPKFSYPMKRTTLENSR--HVSNF------NKNFHEHLKPPLST 169
           S RML   SS   PNPNP     MK  T E SR  H+S F      N N      P   T
Sbjct: 13  SVRMLFSCSSHLCPNPNPSLHRTMKAAT-EASRTPHLSLFSNPMVPNSNSSSQAFPQSIT 71

Query: 168 VSVCQSCSLPISDAIEITTTPDLVQKSLVVVSFYKFADFPDHADLRKPLKALCEQV 1
           +S C S + P S  +    +    + SLVVVSFYKFADF DHADLRKPLKALCE++
Sbjct: 72  LSKCFSVT-PASPVVASEDSEVQSRDSLVVVSFYKFADFHDHADLRKPLKALCEEL 126


>emb|CAN82942.1| hypothetical protein VITISV_013130 [Vitis vinifera]
          Length = 500

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 56/116 (48%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
 Frame = -1

Query: 315 SPRML---SSFTTPNPNPKFSYPMKRTTLENSR--HVSNF------NKNFHEHLKPPLST 169
           S RML   SS   PNPNP     MK  T E SR  H+S F      N N      P   T
Sbjct: 13  SVRMLFSCSSHLCPNPNPSLHRTMKAAT-EASRTPHLSLFSNPMVPNSNSSSQAFPQSIT 71

Query: 168 VSVCQSCSLPISDAIEITTTPDLVQKSLVVVSFYKFADFPDHADLRKPLKALCEQV 1
           +S C S + P S  +    +    + SLVVVSFYKFADF DHADLRKPLKALCE++
Sbjct: 72  LSKCFSVT-PASPVVASEDSEVQSRDSLVVVSFYKFADFHDHADLRKPLKALCEEL 126


>ref|XP_002520891.1| conserved hypothetical protein [Ricinus communis]
           gi|223540022|gb|EEF41600.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 467

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 20/125 (16%)
 Frame = -1

Query: 315 SPRMLSSFTTPNPNPKFSYPMKRTTLENSRHVSNFNKNFHEHLKPPLSTVSVCQSCS-LP 139
           S RM+SS ++  P+   +  ++R  L         N + H+H  PP ST+S   S   LP
Sbjct: 12  SLRMISSASSSFPH---TLDLRRFLLSIKPSSQTPNSSSHQHHLPPFSTISPFDSLKKLP 68

Query: 138 ---------------ISDAIEITTTPDLVQK----SLVVVSFYKFADFPDHADLRKPLKA 16
                           +  + I  TP+L       SLVVVSFYKFADFPDHAD+RKPLK 
Sbjct: 69  RNMTFPKCFSTYGAAATPPVPILDTPELNDPNPLTSLVVVSFYKFADFPDHADMRKPLKE 128

Query: 15  LCEQV 1
           LCE++
Sbjct: 129 LCERL 133


>ref|XP_002275422.1| PREDICTED: UPF0176 protein Mfla_2319-like [Vitis vinifera]
          Length = 431

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
 Frame = -1

Query: 246 TTLENSRHVSNF------NKNFHEHLKPPLSTVSVCQSCSLPISDAIEITTTPDLVQKSL 85
           T    + H+S F      N N      P   T+S C S + P S  +    +    + SL
Sbjct: 5   TEASRTPHLSLFSNPMVPNSNSSSQAFPQSITLSKCFSVT-PASPVVASEDSEVQSRDSL 63

Query: 84  VVVSFYKFADFPDHADLRKPLKALCEQV 1
           VVVSFYKFADF DHADLRKPLKALCE++
Sbjct: 64  VVVSFYKFADFHDHADLRKPLKALCEEL 91


>ref|XP_002325492.1| predicted protein [Populus trichocarpa] gi|222862367|gb|EEE99873.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = -1

Query: 171 TVSVCQSCSLPISDAIEITTTPDL----VQKSLVVVSFYKFADFPDHADLRKPLKALCEQ 4
           TVS C S S P +D + I+  P       + +LVVVSFYKFADFPD+AD+RKPLK LCE+
Sbjct: 2   TVSSCFSGS-PSTDQLSISGAPGSNNSNPESTLVVVSFYKFADFPDYADMRKPLKELCEE 60

Query: 3   V 1
           +
Sbjct: 61  L 61


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