BLASTX nr result
ID: Coptis25_contig00008181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008181
(1500 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31848.3| unnamed protein product [Vitis vinifera] 461 0.0
ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis... 461 0.0
ref|XP_002310896.1| predicted protein [Populus trichocarpa] gi|2... 443 e-175
ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus com... 441 e-173
ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis... 445 e-172
>emb|CBI31848.3| unnamed protein product [Vitis vinifera]
Length = 1106
Score = 461 bits (1185), Expect(2) = 0.0
Identities = 208/270 (77%), Positives = 242/270 (89%)
Frame = +2
Query: 2 WLENIWDWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFE 181
WLENI DWC+SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F
Sbjct: 546 WLENIRDWCVSRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFP 605
Query: 182 GKDFQLAQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMV 361
GK+FQ++QDPDVLDTWFSSGLFPL+VLGWPD+T++LK FYPTSVLETGHDI+FFWVARMV
Sbjct: 606 GKNFQISQDPDVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVLETGHDILFFWVARMV 665
Query: 362 MLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNL 541
MLG+KLGGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLEGL KRLEEGNL
Sbjct: 666 MLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNL 725
Query: 542 DPSELVDAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLW 721
DPSELV AK Q +FP+GIAECGADALRFALV+YTAQS+ IN +I RV+GYRQWCNKLW
Sbjct: 726 DPSELVVAKEGQVKDFPNGIAECGADALRFALVTYTAQSDRINLDIQRVVGYRQWCNKLW 785
Query: 722 NVVRFAMTKLGDNYTPCTDMQDGIYAFQLQ 811
N +RFAM+KLGD+YTP ++ + F Q
Sbjct: 786 NAIRFAMSKLGDDYTPPMEIVPDVMPFTCQ 815
Score = 214 bits (544), Expect(2) = 0.0
Identities = 105/156 (67%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Frame = +3
Query: 795 MPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSRADP 971
MPF+C+WILSVLNK I +TVSS+DSYEFA AA+ VYSWW FQLCD FIEV+KP+FS DP
Sbjct: 810 MPFTCQWILSVLNKAISKTVSSMDSYEFADAASTVYSWWQFQLCDVFIEVVKPFFSSNDP 869
Query: 972 KFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYPSVT 1151
KF S+R A DTLW+ LD+GLRLLHPFM FVTEELWQRLP + KESI+IS YPSV
Sbjct: 870 KFASARRFAQDTLWVCLDNGLRLLHPFMPFVTEELWQRLPPARDCARKESIVISDYPSVV 929
Query: 1152 QKWTNNRIEYEMGLVEVIIKMLRSRQSQLSSDVTHE 1259
Q WTN R+EYEM LVE +K LRS +S + + HE
Sbjct: 930 QCWTNERVEYEMDLVESTVKSLRSLRSLMPAKERHE 965
>ref|XP_002275092.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
Length = 1071
Score = 461 bits (1185), Expect(2) = 0.0
Identities = 208/270 (77%), Positives = 242/270 (89%)
Frame = +2
Query: 2 WLENIWDWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFE 181
WLENI DWC+SRQLWWGHRIPAWYVTLEDD++KE GAY +HWVV RNEEEA++ A+ +F
Sbjct: 511 WLENIRDWCVSRQLWWGHRIPAWYVTLEDDKMKELGAYTDHWVVARNEEEAQIEASRMFP 570
Query: 182 GKDFQLAQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMV 361
GK+FQ++QDPDVLDTWFSSGLFPL+VLGWPD+T++LK FYPTSVLETGHDI+FFWVARMV
Sbjct: 571 GKNFQISQDPDVLDTWFSSGLFPLTVLGWPDDTQDLKAFYPTSVLETGHDILFFWVARMV 630
Query: 362 MLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNL 541
MLG+KLGGD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGISLEGL KRLEEGNL
Sbjct: 631 MLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNL 690
Query: 542 DPSELVDAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLW 721
DPSELV AK Q +FP+GIAECGADALRFALV+YTAQS+ IN +I RV+GYRQWCNKLW
Sbjct: 691 DPSELVVAKEGQVKDFPNGIAECGADALRFALVTYTAQSDRINLDIQRVVGYRQWCNKLW 750
Query: 722 NVVRFAMTKLGDNYTPCTDMQDGIYAFQLQ 811
N +RFAM+KLGD+YTP ++ + F Q
Sbjct: 751 NAIRFAMSKLGDDYTPPMEIVPDVMPFTCQ 780
Score = 214 bits (544), Expect(2) = 0.0
Identities = 105/156 (67%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Frame = +3
Query: 795 MPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSRADP 971
MPF+C+WILSVLNK I +TVSS+DSYEFA AA+ VYSWW FQLCD FIEV+KP+FS DP
Sbjct: 775 MPFTCQWILSVLNKAISKTVSSMDSYEFADAASTVYSWWQFQLCDVFIEVVKPFFSSNDP 834
Query: 972 KFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYPSVT 1151
KF S+R A DTLW+ LD+GLRLLHPFM FVTEELWQRLP + KESI+IS YPSV
Sbjct: 835 KFASARRFAQDTLWVCLDNGLRLLHPFMPFVTEELWQRLPPARDCARKESIVISDYPSVV 894
Query: 1152 QKWTNNRIEYEMGLVEVIIKMLRSRQSQLSSDVTHE 1259
Q WTN R+EYEM LVE +K LRS +S + + HE
Sbjct: 895 QCWTNERVEYEMDLVESTVKSLRSLRSLMPAKERHE 930
>ref|XP_002310896.1| predicted protein [Populus trichocarpa] gi|222853799|gb|EEE91346.1|
predicted protein [Populus trichocarpa]
Length = 1054
Score = 443 bits (1139), Expect(2) = e-175
Identities = 202/256 (78%), Positives = 229/256 (89%)
Frame = +2
Query: 2 WLENIWDWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFE 181
WLENI DWCISRQLWWGHRIPAWYVTL+DD++KE G+Y++HWVV RNEE+A A+ F
Sbjct: 496 WLENIRDWCISRQLWWGHRIPAWYVTLDDDEMKEIGSYHDHWVVARNEEDALAEASQKFS 555
Query: 182 GKDFQLAQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMV 361
GK FQ+ QDPDVLDTWFSSGLFPLSVLGWPD+T++L+ FYPTSVLETGHDI+FFWVARMV
Sbjct: 556 GKKFQMIQDPDVLDTWFSSGLFPLSVLGWPDDTDDLRAFYPTSVLETGHDILFFWVARMV 615
Query: 362 MLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNL 541
MLG+KLGGD+PF+K+YLHPMIRDAHG+KMSKS GNVVDPLEVING+SLEGL KRLEEGNL
Sbjct: 616 MLGIKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVVDPLEVINGVSLEGLHKRLEEGNL 675
Query: 542 DPSELVDAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLW 721
DP EL AK Q +FP+GIAECGADALRFALV YTAQS+ IN +ILRV+GYRQWCNKLW
Sbjct: 676 DPKELDVAKAGQKQDFPNGIAECGADALRFALVCYTAQSDKINLDILRVVGYRQWCNKLW 735
Query: 722 NVVRFAMTKLGDNYTP 769
N VRFAM+KL +YTP
Sbjct: 736 NAVRFAMSKLDTDYTP 751
Score = 201 bits (512), Expect(2) = e-175
Identities = 95/152 (62%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
Frame = +3
Query: 786 MESMPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSR 962
+E+MP SC+WILSVLNK IF+TVS+++SYEF+ AA+ VYSWW +Q CD FIE IKPYFS
Sbjct: 757 LEAMPSSCKWILSVLNKAIFKTVSAMNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFSG 816
Query: 963 ADPKFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYP 1142
P F + RS+A DTLW+ LD+GLRLLHP M FVTEELWQRLP + G+ KESIMIS+YP
Sbjct: 817 DGPSFAAERSSAQDTLWVCLDNGLRLLHPLMPFVTEELWQRLPPARGHTRKESIMISEYP 876
Query: 1143 SVTQKWTNNRIEYEMGLVEVIIKMLRSRQSQL 1238
V W N +EYEM LVE +K LRS ++++
Sbjct: 877 KVEDAWKNEEVEYEMDLVESTVKCLRSLRAKV 908
>ref|XP_002530379.1| valyl-tRNA synthetase, putative [Ricinus communis]
gi|223530096|gb|EEF32012.1| valyl-tRNA synthetase,
putative [Ricinus communis]
Length = 1065
Score = 441 bits (1135), Expect(2) = e-173
Identities = 202/256 (78%), Positives = 231/256 (90%)
Frame = +2
Query: 2 WLENIWDWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFE 181
WLENI DWCISRQLWWGHRIPAWY+TLEDD+LKEFG YN+HWVVGR+E+EA A+ F
Sbjct: 506 WLENIRDWCISRQLWWGHRIPAWYITLEDDELKEFGVYNDHWVVGRDEKEALEEASLKFA 565
Query: 182 GKDFQLAQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMV 361
GK F+++QDPDVLDTWFSSGLFPLSVLGWPD+T++LK FYPTSVLETGHDI+FFWVARMV
Sbjct: 566 GKKFEMSQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKTFYPTSVLETGHDILFFWVARMV 625
Query: 362 MLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNL 541
MLG+ L GD+PF+K+YLHPMIRDAHG+KMSKS GNV+DPLEVINGI+LEGL KRLEEGNL
Sbjct: 626 MLGITLRGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGINLEGLHKRLEEGNL 685
Query: 542 DPSELVDAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLW 721
DP+ELV AK Q +FP+GIAECGADALRFALVSYTAQS+ IN +I RV+GYRQWCNKLW
Sbjct: 686 DPNELVTAKDGQKKDFPNGIAECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLW 745
Query: 722 NVVRFAMTKLGDNYTP 769
N VRFAM+KL +Y+P
Sbjct: 746 NAVRFAMSKLDADYSP 761
Score = 194 bits (494), Expect(2) = e-173
Identities = 89/151 (58%), Positives = 118/151 (78%), Gaps = 1/151 (0%)
Frame = +3
Query: 789 ESMPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSRA 965
E++PFSC+WILS LNK I TVS+++SYEF+ AA+ VYSWW +Q CD FIE IKPYF
Sbjct: 768 EALPFSCKWILSALNKAIARTVSAMNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFVGD 827
Query: 966 DPKFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYPS 1145
+P++ S+++AA TLW+ LD+GLRLLHPFM FVTEELWQRLP + + K+SIMIS+YPS
Sbjct: 828 NPEYASAKNAAQGTLWVCLDNGLRLLHPFMPFVTEELWQRLPSARDHTRKDSIMISEYPS 887
Query: 1146 VTQKWTNNRIEYEMGLVEVIIKMLRSRQSQL 1238
+ WTN ++EYEM LVE +K +RS + ++
Sbjct: 888 AVEAWTNEQVEYEMDLVESTVKCVRSLRGEV 918
>ref|XP_004163107.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus]
Length = 1045
Score = 445 bits (1144), Expect(2) = e-172
Identities = 204/270 (75%), Positives = 230/270 (85%)
Frame = +2
Query: 2 WLENIWDWCISRQLWWGHRIPAWYVTLEDDQLKEFGAYNEHWVVGRNEEEAKLLANNLFE 181
WL+NI DWCISRQLWWGHRIPAWY LEDDQLKEFGAYN+HWVV RNEEEA+ A ++
Sbjct: 497 WLDNIRDWCISRQLWWGHRIPAWYAALEDDQLKEFGAYNDHWVVARNEEEAEEEAKRIYA 556
Query: 182 GKDFQLAQDPDVLDTWFSSGLFPLSVLGWPDNTEELKVFYPTSVLETGHDIIFFWVARMV 361
GK F L QDPDVLDTWFSSGLFPLSVLGWPD+TE+LK FYPTS LETGHDIIFFWVARMV
Sbjct: 557 GKKFHLTQDPDVLDTWFSSGLFPLSVLGWPDDTEDLKAFYPTSALETGHDIIFFWVARMV 616
Query: 362 MLGMKLGGDIPFKKIYLHPMIRDAHGKKMSKSKGNVVDPLEVINGISLEGLQKRLEEGNL 541
MLG+ LGGD+PF+ IYLHPMIRDAHG+KMSKS GNV+DP+EVINGISLEGL KRLEEGNL
Sbjct: 617 MLGITLGGDVPFQTIYLHPMIRDAHGRKMSKSLGNVIDPVEVINGISLEGLHKRLEEGNL 676
Query: 542 DPSELVDAKREQAVEFPDGIAECGADALRFALVSYTAQSENINCNILRVIGYRQWCNKLW 721
DP EL AK Q +FP+GI+ECGADALRFAL+SYTAQS+ IN +I RV+GYRQWCNKLW
Sbjct: 677 DPKELAIAKEGQVKDFPNGISECGADALRFALISYTAQSDKINLDIQRVVGYRQWCNKLW 736
Query: 722 NVVRFAMTKLGDNYTPCTDMQDGIYAFQLQ 811
N +RFAM+KLG++Y P ++ F Q
Sbjct: 737 NAIRFAMSKLGNDYVPNKNVTPDALPFSCQ 766
Score = 189 bits (481), Expect(2) = e-172
Identities = 90/146 (61%), Positives = 111/146 (76%), Gaps = 1/146 (0%)
Frame = +3
Query: 789 ESMPFSCRWILSVLNKGIFETVSSLDSYEFAKAANAVYSWW-FQLCDTFIEVIKPYFSRA 965
+++PFSC+WILSVLNK I T+SSL+SYEF+ A AVYSWW +QLCD FIE IKPYFS
Sbjct: 759 DALPFSCQWILSVLNKAISRTISSLESYEFSDATTAVYSWWQYQLCDVFIEAIKPYFSSN 818
Query: 966 DPKFDSSRSAACDTLWISLDSGLRLLHPFMHFVTEELWQRLPKSSGNYSKESIMISKYPS 1145
+ F S+RS A DTLW+ L++GLRLLHPFM +VTEELWQRLP + ESIMI YPS
Sbjct: 819 ETDFSSARSHAQDTLWLCLENGLRLLHPFMPYVTEELWQRLPYPKNSTRPESIMICDYPS 878
Query: 1146 VTQKWTNNRIEYEMGLVEVIIKMLRS 1223
VT++WTN +E EM L+ ++ LRS
Sbjct: 879 VTEEWTNEDVENEMDLIVSAVRSLRS 904