BLASTX nr result
ID: Coptis25_contig00008175
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00008175 (552 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228... 83 3e-14 ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211... 83 3e-14 ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago tru... 78 1e-12 ref|XP_002282257.1| PREDICTED: uncharacterized protein LOC100243... 77 1e-12 ref|XP_002313518.1| predicted protein [Populus trichocarpa] gi|2... 75 5e-12 >ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228076 [Cucumis sativus] Length = 222 Score = 83.2 bits (204), Expect = 3e-14 Identities = 40/65 (61%), Positives = 50/65 (76%) Frame = -3 Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371 FL+NKA+E FL C+D YA AQDR+K + YK +S VSK K+YDFLSDFVP+K++ ED Sbjct: 150 FLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED 209 Query: 370 ALLER 356 AL ER Sbjct: 210 ALKER 214 >ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211039 [Cucumis sativus] Length = 221 Score = 83.2 bits (204), Expect = 3e-14 Identities = 40/65 (61%), Positives = 50/65 (76%) Frame = -3 Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371 FL+NKA+E FL C+D YA AQDR+K + YK +S VSK K+YDFLSDFVP+K++ ED Sbjct: 149 FLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED 208 Query: 370 ALLER 356 AL ER Sbjct: 209 ALKER 213 >ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago truncatula] gi|355507460|gb|AES88602.1| DNA polymerase epsilon subunit [Medicago truncatula] gi|388523247|gb|AFK49676.1| nuclear transcription factor Y subunit C7 [Medicago truncatula] Length = 179 Score = 77.8 bits (190), Expect = 1e-12 Identities = 38/62 (61%), Positives = 46/62 (74%) Frame = -3 Query: 544 INKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAEDAL 365 IN A E+FLE L ED Y AQDR+K + Y +S VSK K+YDFLSDFVP+K++AEDAL Sbjct: 109 INNAAEKFLEQLAEDAYGCCAQDRKKSLSYNHLSRVVSKQKRYDFLSDFVPEKVKAEDAL 168 Query: 364 LE 359 E Sbjct: 169 RE 170 >ref|XP_002282257.1| PREDICTED: uncharacterized protein LOC100243337 [Vitis vinifera] gi|297746240|emb|CBI16296.3| unnamed protein product [Vitis vinifera] Length = 425 Score = 77.4 bits (189), Expect = 1e-12 Identities = 38/69 (55%), Positives = 50/69 (72%) Frame = -3 Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371 FLINKA+E+FL+ D YA +DR+ V YK I+ AVSK K++DFLSDFVP+++ AE Sbjct: 357 FLINKASEEFLQQFVNDAYACSVKDRKNYVSYKHIASAVSKCKRFDFLSDFVPERVSAEK 416 Query: 370 ALLERLTQT 344 AL ER +T Sbjct: 417 ALAERSAKT 425 >ref|XP_002313518.1| predicted protein [Populus trichocarpa] gi|222849926|gb|EEE87473.1| predicted protein [Populus trichocarpa] Length = 212 Score = 75.5 bits (184), Expect = 5e-12 Identities = 35/65 (53%), Positives = 49/65 (75%) Frame = -3 Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371 FL+NKATE+FLE ++ Y QDR+K + YK +S VSK +++DFLSDFVP+K+ A+D Sbjct: 140 FLVNKATEKFLEQFSDEAYDYSVQDRKKSLAYKHLSTVVSKRRRFDFLSDFVPEKLNAKD 199 Query: 370 ALLER 356 AL +R Sbjct: 200 ALADR 204