BLASTX nr result

ID: Coptis25_contig00008175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008175
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228...    83   3e-14
ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211...    83   3e-14
ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago tru...    78   1e-12
ref|XP_002282257.1| PREDICTED: uncharacterized protein LOC100243...    77   1e-12
ref|XP_002313518.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12

>ref|XP_004170032.1| PREDICTED: uncharacterized protein LOC101228076 [Cucumis sativus]
          Length = 222

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = -3

Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371
           FL+NKA+E FL   C+D YA  AQDR+K + YK +S  VSK K+YDFLSDFVP+K++ ED
Sbjct: 150 FLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED 209

Query: 370 ALLER 356
           AL ER
Sbjct: 210 ALKER 214


>ref|XP_004149539.1| PREDICTED: uncharacterized protein LOC101211039 [Cucumis sativus]
          Length = 221

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = -3

Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371
           FL+NKA+E FL   C+D YA  AQDR+K + YK +S  VSK K+YDFLSDFVP+K++ ED
Sbjct: 149 FLVNKASEMFLVQFCKDAYACCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED 208

Query: 370 ALLER 356
           AL ER
Sbjct: 209 ALKER 213


>ref|XP_003606405.1| DNA polymerase epsilon subunit [Medicago truncatula]
           gi|355507460|gb|AES88602.1| DNA polymerase epsilon
           subunit [Medicago truncatula]
           gi|388523247|gb|AFK49676.1| nuclear transcription factor
           Y subunit C7 [Medicago truncatula]
          Length = 179

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/62 (61%), Positives = 46/62 (74%)
 Frame = -3

Query: 544 INKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAEDAL 365
           IN A E+FLE L ED Y   AQDR+K + Y  +S  VSK K+YDFLSDFVP+K++AEDAL
Sbjct: 109 INNAAEKFLEQLAEDAYGCCAQDRKKSLSYNHLSRVVSKQKRYDFLSDFVPEKVKAEDAL 168

Query: 364 LE 359
            E
Sbjct: 169 RE 170


>ref|XP_002282257.1| PREDICTED: uncharacterized protein LOC100243337 [Vitis vinifera]
           gi|297746240|emb|CBI16296.3| unnamed protein product
           [Vitis vinifera]
          Length = 425

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = -3

Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371
           FLINKA+E+FL+    D YA   +DR+  V YK I+ AVSK K++DFLSDFVP+++ AE 
Sbjct: 357 FLINKASEEFLQQFVNDAYACSVKDRKNYVSYKHIASAVSKCKRFDFLSDFVPERVSAEK 416

Query: 370 ALLERLTQT 344
           AL ER  +T
Sbjct: 417 ALAERSAKT 425


>ref|XP_002313518.1| predicted protein [Populus trichocarpa] gi|222849926|gb|EEE87473.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 35/65 (53%), Positives = 49/65 (75%)
 Frame = -3

Query: 550 FLINKATEQFLEVLCEDVYAKIAQDRRKVVDYKLISFAVSKGKKYDFLSDFVPDKIRAED 371
           FL+NKATE+FLE   ++ Y    QDR+K + YK +S  VSK +++DFLSDFVP+K+ A+D
Sbjct: 140 FLVNKATEKFLEQFSDEAYDYSVQDRKKSLAYKHLSTVVSKRRRFDFLSDFVPEKLNAKD 199

Query: 370 ALLER 356
           AL +R
Sbjct: 200 ALADR 204


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