BLASTX nr result

ID: Coptis25_contig00008169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008169
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25516.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002267266.1| PREDICTED: WD repeat domain phosphoinositide...    58   7e-07
ref|XP_003526787.1| PREDICTED: WD repeat domain phosphoinositide...    56   3e-06
ref|XP_003523295.1| PREDICTED: WD repeat domain phosphoinositide...    56   3e-06

>emb|CBI25516.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%), Gaps = 3/37 (8%)
 Frame = -3

Query: 103 FTQSEPDFNESD---LLSVSWNQDYGCFAAGTTRGFR 2
           F QS P+FN++D   LLSVSWNQD+GCFAAGTT GFR
Sbjct: 30  FGQSVPEFNDTDETGLLSVSWNQDHGCFAAGTTHGFR 66


>ref|XP_002267266.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
           3-like [Vitis vinifera]
          Length = 417

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/37 (72%), Positives = 31/37 (83%), Gaps = 3/37 (8%)
 Frame = -3

Query: 103 FTQSEPDFNESD---LLSVSWNQDYGCFAAGTTRGFR 2
           F QS P+FN++D   LLSVSWNQD+GCFAAGTT GFR
Sbjct: 37  FGQSVPEFNDTDETGLLSVSWNQDHGCFAAGTTHGFR 73


>ref|XP_003526787.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
           3-like [Glycine max]
          Length = 406

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%), Gaps = 3/37 (8%)
 Frame = -3

Query: 103 FTQSEPDFNES---DLLSVSWNQDYGCFAAGTTRGFR 2
           FTQ   D NE+   DLLS+SWNQDYGCFAAGT+ GFR
Sbjct: 31  FTQPMEDMNENEETDLLSISWNQDYGCFAAGTSHGFR 67


>ref|XP_003523295.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
           3-like [Glycine max]
          Length = 419

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%), Gaps = 3/37 (8%)
 Frame = -3

Query: 103 FTQSEPDFNESD---LLSVSWNQDYGCFAAGTTRGFR 2
           FTQ   D NE+D   LLS+SWNQDYGCFAAGT+ GFR
Sbjct: 39  FTQPIADMNENDETDLLSISWNQDYGCFAAGTSHGFR 75


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