BLASTX nr result

ID: Coptis25_contig00008162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008162
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237440.1| thioredoxin [Glycine max] gi|46326970|gb|AAS...   159   5e-37
gb|ACU15762.1| unknown [Glycine max]                                  159   5e-37
ref|XP_003552507.1| PREDICTED: thioredoxin H2 [Glycine max]           155   7e-36
ref|XP_002517458.1| Thioredoxin H-type, putative [Ricinus commun...   152   1e-34
ref|XP_002282318.1| PREDICTED: thioredoxin H2 [Vitis vinifera] g...   149   6e-34

>ref|NP_001237440.1| thioredoxin [Glycine max] gi|46326970|gb|AAS88427.1| thioredoxin
           [Glycine max]
          Length = 135

 Score =  159 bits (403), Expect = 5e-37
 Identities = 77/111 (69%), Positives = 94/111 (84%)
 Frame = -3

Query: 529 RVQAFHSSSEWKNHLNAIKDDSSLMVIDFTASWCGPCKFIEPAFIDLSNKFTDVIFVKID 350
           RVQ+FHSS+ W+ H N +K+ + L+VIDF+ASWCGPCKFIEPA   +S KFTDV FVKID
Sbjct: 26  RVQSFHSSARWQLHFNELKETNKLVVIDFSASWCGPCKFIEPAIHAMSEKFTDVDFVKID 85

Query: 349 VDELKEVAQEFSVQAMPTFVLFRKGKQVDKVVGAKKDELHRKIEFELHRAQ 197
           VDEL +VA+EF+V+AMPTFVL +KGK+VDKVVGAKKDEL +KI  E HR+Q
Sbjct: 86  VDELPDVAKEFNVEAMPTFVLCKKGKEVDKVVGAKKDELEKKI--EKHRSQ 134


>gb|ACU15762.1| unknown [Glycine max]
          Length = 157

 Score =  159 bits (403), Expect = 5e-37
 Identities = 77/111 (69%), Positives = 94/111 (84%)
 Frame = -3

Query: 529 RVQAFHSSSEWKNHLNAIKDDSSLMVIDFTASWCGPCKFIEPAFIDLSNKFTDVIFVKID 350
           RVQ+FHSS+ W+ H N +K+ + L+VIDF+ASWCGPCKFIEPA   +S KFTDV FVKID
Sbjct: 48  RVQSFHSSARWQLHFNELKETNKLVVIDFSASWCGPCKFIEPAIHAMSEKFTDVDFVKID 107

Query: 349 VDELKEVAQEFSVQAMPTFVLFRKGKQVDKVVGAKKDELHRKIEFELHRAQ 197
           VDEL +VA+EF+V+AMPTFVL +KGK+VDKVVGAKKDEL +KI  E HR+Q
Sbjct: 108 VDELPDVAKEFNVEAMPTFVLCKKGKEVDKVVGAKKDELEKKI--EKHRSQ 156


>ref|XP_003552507.1| PREDICTED: thioredoxin H2 [Glycine max]
          Length = 133

 Score =  155 bits (393), Expect = 7e-36
 Identities = 74/104 (71%), Positives = 87/104 (83%)
 Frame = -3

Query: 529 RVQAFHSSSEWKNHLNAIKDDSSLMVIDFTASWCGPCKFIEPAFIDLSNKFTDVIFVKID 350
           RV +FHSS  W+ + N IKD   L+VIDF+ASWCGPCKFIEPA   +++KF DV FVKID
Sbjct: 26  RVSSFHSSPRWQLYFNEIKDTDKLVVIDFSASWCGPCKFIEPAIHAMADKFNDVDFVKID 85

Query: 349 VDELKEVAQEFSVQAMPTFVLFRKGKQVDKVVGAKKDELHRKIE 218
           VDEL +VAQEF VQAMPTFVL++KGK+VDKVVGAKKDEL +KIE
Sbjct: 86  VDELPDVAQEFQVQAMPTFVLWKKGKEVDKVVGAKKDELEKKIE 129


>ref|XP_002517458.1| Thioredoxin H-type, putative [Ricinus communis]
           gi|223543469|gb|EEF45000.1| Thioredoxin H-type, putative
           [Ricinus communis]
          Length = 133

 Score =  152 bits (383), Expect = 1e-34
 Identities = 74/109 (67%), Positives = 86/109 (78%)
 Frame = -3

Query: 526 VQAFHSSSEWKNHLNAIKDDSSLMVIDFTASWCGPCKFIEPAFIDLSNKFTDVIFVKIDV 347
           VQ FHSS  W+ H N+IKD S LMV+DF ASWCGPCKF+EP    ++ K++DV F KIDV
Sbjct: 26  VQTFHSSERWQLHFNSIKDSSQLMVVDFAASWCGPCKFMEPEIKSMATKYSDVQFSKIDV 85

Query: 346 DELKEVAQEFSVQAMPTFVLFRKGKQVDKVVGAKKDELHRKIEFELHRA 200
           DEL  VAQEF VQAMPTFVL +KGK+VD+VVGAKKDEL +KI  E HRA
Sbjct: 86  DELPGVAQEFGVQAMPTFVLVKKGKEVDRVVGAKKDELLKKI--EKHRA 132


>ref|XP_002282318.1| PREDICTED: thioredoxin H2 [Vitis vinifera]
           gi|147821566|emb|CAN70031.1| hypothetical protein
           VITISV_013686 [Vitis vinifera]
           gi|296087778|emb|CBI35034.3| unnamed protein product
           [Vitis vinifera] gi|452114370|gb|AGG09342.1| thioredoxin
           h4 [Vitis vinifera]
          Length = 136

 Score =  149 bits (376), Expect = 6e-34
 Identities = 70/109 (64%), Positives = 88/109 (80%)
 Frame = -3

Query: 526 VQAFHSSSEWKNHLNAIKDDSSLMVIDFTASWCGPCKFIEPAFIDLSNKFTDVIFVKIDV 347
           V  FHSS  W  H NA K+ + LMVIDF A+WCGPCKF+EPA   +++K+TDV FVKIDV
Sbjct: 26  VNVFHSSERWLLHFNASKESNQLMVIDFAATWCGPCKFMEPAVKSMASKYTDVDFVKIDV 85

Query: 346 DELKEVAQEFSVQAMPTFVLFRKGKQVDKVVGAKKDELHRKIEFELHRA 200
           DEL +VAQEF+VQAMPTFVL +KGK++++V+GAKKDEL +KI  + HRA
Sbjct: 86  DELPDVAQEFTVQAMPTFVLLKKGKELERVIGAKKDELEKKI--QKHRA 132


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