BLASTX nr result
ID: Coptis25_contig00008161
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00008161 (516 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27769.3| unnamed protein product [Vitis vinifera] 83 3e-14 ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 83 3e-14 ref|XP_003569099.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 81 8e-14 ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-13 ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 80 2e-13 >emb|CBI27769.3| unnamed protein product [Vitis vinifera] Length = 584 Score = 82.8 bits (203), Expect = 3e-14 Identities = 43/65 (66%), Positives = 44/65 (67%) Frame = +2 Query: 2 SWV*AYTAHRGELNRIFMVKKLHLGHVAKSFGLKDQPSLVGGSXXXXXXXXXXXXXXXGL 181 SWV AYTAHRGEL RIF VKKLHLGHVAKSF LKDQPSLVG S GL Sbjct: 515 SWVRAYTAHRGELKRIFQVKKLHLGHVAKSFALKDQPSLVGKSMQMQTKKRKRDQKQQGL 574 Query: 182 MKRRK 196 KR+K Sbjct: 575 SKRKK 579 >ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis vinifera] Length = 600 Score = 82.8 bits (203), Expect = 3e-14 Identities = 43/65 (66%), Positives = 44/65 (67%) Frame = +2 Query: 2 SWV*AYTAHRGELNRIFMVKKLHLGHVAKSFGLKDQPSLVGGSXXXXXXXXXXXXXXXGL 181 SWV AYTAHRGEL RIF VKKLHLGHVAKSF LKDQPSLVG S GL Sbjct: 531 SWVRAYTAHRGELKRIFQVKKLHLGHVAKSFALKDQPSLVGKSMQMQTKKRKRDQKQQGL 590 Query: 182 MKRRK 196 KR+K Sbjct: 591 SKRKK 595 >ref|XP_003569099.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Brachypodium distachyon] Length = 605 Score = 81.3 bits (199), Expect = 8e-14 Identities = 43/72 (59%), Positives = 49/72 (68%) Frame = +2 Query: 2 SWV*AYTAHRGELNRIFMVKKLHLGHVAKSFGLKDQPSLVGGSXXXXXXXXXXXXXXXGL 181 SW+ AYTAHRGEL +IFMVKKLHLGHVAKSFGLK+QPSLVG + Sbjct: 536 SWLRAYTAHRGELKKIFMVKKLHLGHVAKSFGLKEQPSLVGRAHQVQ------------- 582 Query: 182 MKRRKSFGKHER 217 +K+RK KHER Sbjct: 583 LKKRKKEQKHER 594 >ref|XP_002325490.1| predicted protein [Populus trichocarpa] gi|222862365|gb|EEE99871.1| predicted protein [Populus trichocarpa] Length = 594 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/65 (63%), Positives = 45/65 (69%) Frame = +2 Query: 2 SWV*AYTAHRGELNRIFMVKKLHLGHVAKSFGLKDQPSLVGGSXXXXXXXXXXXXXXXGL 181 SWV AYTAHRG+L RIFMVKKLHLGHV++SFGLK QPSLVG S GL Sbjct: 523 SWVRAYTAHRGDLKRIFMVKKLHLGHVSRSFGLKQQPSLVGQSFQNQSKKRKREGKQKGL 582 Query: 182 MKRRK 196 K+RK Sbjct: 583 SKQRK 587 >ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 17-like [Glycine max] Length = 591 Score = 80.1 bits (196), Expect = 2e-13 Identities = 41/68 (60%), Positives = 44/68 (64%) Frame = +2 Query: 2 SWV*AYTAHRGELNRIFMVKKLHLGHVAKSFGLKDQPSLVGGSXXXXXXXXXXXXXXXGL 181 SWV AYTAHRGEL R+FM+KKLHLGHVAKSF LK PSLVG S GL Sbjct: 523 SWVRAYTAHRGELKRVFMIKKLHLGHVAKSFALKQPPSLVGQSFQKQIEKRKIFEKKNGL 582 Query: 182 MKRRKSFG 205 K+RK G Sbjct: 583 SKKRKVAG 590