BLASTX nr result

ID: Coptis25_contig00008158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008158
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002459858.1| hypothetical protein SORBIDRAFT_02g012480 [S...   112   2e-23
gb|EEE65370.1| hypothetical protein OsJ_20664 [Oryza sativa Japo...   111   7e-23
gb|EEC82135.1| hypothetical protein OsI_26179 [Oryza sativa Indi...   111   7e-23
ref|NP_001057201.1| Os06g0226000 [Oryza sativa Japonica Group] g...   111   7e-23
ref|XP_002451529.1| hypothetical protein SORBIDRAFT_04g003338 [S...   110   9e-23

>ref|XP_002459858.1| hypothetical protein SORBIDRAFT_02g012480 [Sorghum bicolor]
           gi|241923235|gb|EER96379.1| hypothetical protein
           SORBIDRAFT_02g012480 [Sorghum bicolor]
          Length = 189

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/93 (55%), Positives = 63/93 (67%)
 Frame = +2

Query: 32  LTIPNGKYYLADAGFALVPGFLTPYRGVRYHLREIGEVQPQNHKEQYNFRHSSLRTVVER 211
           L +P GK+YL DAG+A+ PGFL  YRG RYHL E G  +PQN +E +N RHSSLR  VER
Sbjct: 37  LKVPTGKFYLVDAGYAVRPGFLLSYRGTRYHLSEFGVRRPQNPRELFNLRHSSLRVTVER 96

Query: 212 TISLLKKRFAYLRHAVFHDVKTHIKVILACCAL 310
               LK RF  L +  FH  KT +K++LACC L
Sbjct: 97  AFGSLKNRFRILDNKPFHPYKTQVKLVLACCIL 129


>gb|EEE65370.1| hypothetical protein OsJ_20664 [Oryza sativa Japonica Group]
          Length = 372

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   RSAVSRPGHKLTIPNGKYYLADAGFALVPGFLTPYRGVRYHLREI-GEVQPQNHKEQYNF 178
           + A+SR  + L IP GKY+LADAG+A  PG L PYRG RYHL+E  G  +P+N KE +N 
Sbjct: 209 QDALSRT-NGLKIPEGKYFLADAGYAARPGVLPPYRGTRYHLKEYKGAREPENPKELFNL 267

Query: 179 RHSSLRTVVERTISLLKKRFAYLRHAVFHDVKTHIKVILACCAL 310
           RHSSLRT +ER    LK RF   +   F  +KT +K+++ACCAL
Sbjct: 268 RHSSLRTTIERAFGALKNRFRIFKCQPFFPLKTQVKIVMACCAL 311


>gb|EEC82135.1| hypothetical protein OsI_26179 [Oryza sativa Indica Group]
          Length = 325

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   RSAVSRPGHKLTIPNGKYYLADAGFALVPGFLTPYRGVRYHLREI-GEVQPQNHKEQYNF 178
           + A+SR  + L IP GKY+LADAG+A  PG L PYRG RYHL+E  G  +P+N KE +N 
Sbjct: 162 QDALSRT-NGLKIPEGKYFLADAGYAARPGVLPPYRGTRYHLKEYKGTREPENPKELFNL 220

Query: 179 RHSSLRTVVERTISLLKKRFAYLRHAVFHDVKTHIKVILACCAL 310
           RHSSLRT +ER    LK RF   +   F  +KT +K+++ACCAL
Sbjct: 221 RHSSLRTTIERAFGALKNRFRIFKCQPFFPLKTQVKIVMACCAL 264


>ref|NP_001057201.1| Os06g0226000 [Oryza sativa Japonica Group]
           gi|113595241|dbj|BAF19115.1| Os06g0226000, partial
           [Oryza sativa Japonica Group]
          Length = 225

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   RSAVSRPGHKLTIPNGKYYLADAGFALVPGFLTPYRGVRYHLREI-GEVQPQNHKEQYNF 178
           + A+SR  + L IP GKY+LADAG+A  PG L PYRG RYHL+E  G  +P+N KE +N 
Sbjct: 62  QDALSRT-NGLKIPEGKYFLADAGYAARPGVLPPYRGTRYHLKEYKGAREPENPKELFNL 120

Query: 179 RHSSLRTVVERTISLLKKRFAYLRHAVFHDVKTHIKVILACCAL 310
           RHSSLRT +ER    LK RF   +   F  +KT +K+++ACCAL
Sbjct: 121 RHSSLRTTIERAFGALKNRFRIFKCQPFFPLKTQVKIVMACCAL 164


>ref|XP_002451529.1| hypothetical protein SORBIDRAFT_04g003338 [Sorghum bicolor]
           gi|241931360|gb|EES04505.1| hypothetical protein
           SORBIDRAFT_04g003338 [Sorghum bicolor]
          Length = 222

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/92 (55%), Positives = 62/92 (67%)
 Frame = +2

Query: 35  TIPNGKYYLADAGFALVPGFLTPYRGVRYHLREIGEVQPQNHKEQYNFRHSSLRTVVERT 214
           T+P GKYYL DAG+A   GFL PYRGVRYHL E G  +P N +E +N RHSSLR  VER 
Sbjct: 72  TMPQGKYYLVDAGYACKNGFLPPYRGVRYHLSEFGSNRPTNAQELFNLRHSSLRVTVERA 131

Query: 215 ISLLKKRFAYLRHAVFHDVKTHIKVILACCAL 310
           I  LK RF  L +  FH  KT +K+++ CC +
Sbjct: 132 IGALKNRFRILDNKPFHKYKTQLKLVIDCCII 163


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