BLASTX nr result

ID: Coptis25_contig00008152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008152
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260...    85   8e-15
ref|NP_001242042.1| uncharacterized protein LOC100797484 [Glycin...    76   4e-12
ref|NP_001236830.1| uncharacterized protein LOC100305542 [Glycin...    76   5e-12
ref|XP_002510114.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|2...    70   4e-10

>ref|XP_002285235.1| PREDICTED: uncharacterized protein LOC100260909 [Vitis vinifera]
           gi|302142215|emb|CBI19418.3| unnamed protein product
           [Vitis vinifera]
          Length = 91

 Score = 85.1 bits (209), Expect = 8e-15
 Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
 Frame = +1

Query: 4   ETMVFLIRRVWSSFMTRLRIRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRHIKA 183
           + M+F +R VW+    R  IRK GLLKL NDVR CEY DVHVMWEML  TE ++ R   +
Sbjct: 5   DKMMFPMRTVWNGVAKRFGIRKTGLLKLRNDVRTCEYRDVHVMWEMLNGTETELGR---S 61

Query: 184 PKRHMTNS----------WASRVPHLCRS 240
           P+R   NS          WA R P+LCRS
Sbjct: 62  PERSTGNSKKRTYWKIIEWAKRAPYLCRS 90


>ref|NP_001242042.1| uncharacterized protein LOC100797484 [Glycine max]
           gi|255640574|gb|ACU20572.1| unknown [Glycine max]
          Length = 104

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 11/90 (12%)
 Frame = +1

Query: 4   ETMVFLIRRVWSSFMTRLRIRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRHIKA 183
           + M++ +RRVW    TRL IRKNGLLKL +DVR CEYED+ VMWE+L + E        +
Sbjct: 15  QNMMYPVRRVWFVVATRLGIRKNGLLKLRHDVRACEYEDIRVMWEILNRNESKFGHSSSS 74

Query: 184 PKRHMTNS-----------WASRVPHLCRS 240
            K +  N+           WA   P++CR+
Sbjct: 75  RKGNNNNNNKKGHCWKLLRWARCAPYMCRA 104


>ref|NP_001236830.1| uncharacterized protein LOC100305542 [Glycine max]
           gi|255625859|gb|ACU13274.1| unknown [Glycine max]
          Length = 100

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
 Frame = +1

Query: 4   ETMVFLIRRVWSSFMTRLRIRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRHIKA 183
           + M+F +RRVW     RL IRK GLLKLSNDVR CEYED+ VMWE+L + E +  R    
Sbjct: 15  QNMMFPVRRVWFVVAKRLGIRKTGLLKLSNDVRACEYEDIQVMWEILNRNESEFGRSSST 74

Query: 184 PKRHMTNS-------WASRVPHLCRS 240
            K +           WA   P +CR+
Sbjct: 75  RKGNNKKGHCWKLLRWARCAPCMCRT 100


>ref|XP_002510114.1| conserved hypothetical protein [Ricinus communis]
           gi|223550815|gb|EEF52301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = +1

Query: 22  IRRVWSSFMTRLRIRKNGLLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRH---IKAPKR 192
           +RRVW     R+ IRK GLLKL +DVR CEYEDV +MWEMLR+TE +  R    +K+ KR
Sbjct: 11  VRRVWKGVALRIGIRKRGLLKLRHDVRACEYEDVRIMWEMLRRTETESARQSQPVKSKKR 70

Query: 193 HMTN--SWASRVPHLCRS 240
                 SWA   P+  R+
Sbjct: 71  CFWKCFSWARCSPYFGRN 88


>ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|222841401|gb|EEE78948.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
 Frame = +1

Query: 10  MVFLIRRVWSSFMTRLRIRKNG--LLKLSNDVRMCEYEDVHVMWEMLRKTEPDICRHIKA 183
           M+F +RRVW +   RLR RKNG  LL+L NDV+ C YEDV VMWE+LR++E ++   +  
Sbjct: 5   MIFPVRRVWLAVSARLRARKNGAGLLELHNDVQTCGYEDVQVMWEILRRSESELMASL-- 62

Query: 184 PKRHMTNSW 210
           PKR     W
Sbjct: 63  PKRKQRPFW 71


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