BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008148
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779...    88   8e-24
ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat...    88   1e-23
ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat...    88   2e-23
ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containi...    87   5e-23
ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat...    87   2e-22

>ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score = 88.2 bits (217), Expect(2) = 8e-24
 Identities = 37/70 (52%), Positives = 55/70 (78%)
 Frame = +1

Query: 4   FNQLLAALVKMKHFSVALSMSKRMDTAGIQPDIVTLNTLISCYSNMGRVDFGFAVFGSIL 183
           FN++L +  KMKH+S A+S+S R++  GIQPD++TLN LI+C+ +MG++ FGF+V   IL
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 184 KRGFEPNAVT 213
           KRG+ P+ VT
Sbjct: 122 KRGYPPDTVT 131



 Score = 47.0 bits (110), Expect(2) = 8e-24
 Identities = 19/51 (37%), Positives = 36/51 (70%)
 Frame = +2

Query: 209 LLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQFPPNVHIYTML 361
           LL  G+  N+VSYGT++NG+CK  ++ AA++ ++ ++ +   PNV +Y+ +
Sbjct: 155 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTI 205



 Score = 75.1 bits (183), Expect(2) = 1e-19
 Identities = 30/60 (50%), Positives = 46/60 (76%)
 Frame = +1

Query: 34   MKHFSVALSMSKRMDTAGIQPDIVTLNTLISCYSNMGRVDFGFAVFGSILKRGFEPNAVT 213
            MKH+S A+S+S R++  GIQPD+ TLN LI+C+ +MG++ F F++   ILKRG+ P+ +T
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998



 Score = 46.2 bits (108), Expect(2) = 1e-19
 Identities = 19/51 (37%), Positives = 35/51 (68%)
 Frame = +2

Query: 209  LLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQFPPNVHIYTML 361
            LL  G+  N+VSYGT++NG+CK  ++ AA++ +R ++ +   P+V +Y  +
Sbjct: 1022 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072


>ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 88.2 bits (217), Expect(2) = 1e-23
 Identities = 37/70 (52%), Positives = 55/70 (78%)
 Frame = +1

Query: 4   FNQLLAALVKMKHFSVALSMSKRMDTAGIQPDIVTLNTLISCYSNMGRVDFGFAVFGSIL 183
           FN++L +  KMKH+S A+S+S R++  GIQPD++TLN LI+C+ +MG++ FGF+V   IL
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 184 KRGFEPNAVT 213
           KRG+ P+ VT
Sbjct: 122 KRGYPPDTVT 131



 Score = 46.2 bits (108), Expect(2) = 1e-23
 Identities = 19/51 (37%), Positives = 35/51 (68%)
 Frame = +2

Query: 209 LLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQFPPNVHIYTML 361
           LL  G+  N+VSY T++NG+CK  ++ AA++F+R ++ +   P+V +Y  +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTI 205


>ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 88.2 bits (217), Expect(2) = 2e-23
 Identities = 37/70 (52%), Positives = 55/70 (78%)
 Frame = +1

Query: 4   FNQLLAALVKMKHFSVALSMSKRMDTAGIQPDIVTLNTLISCYSNMGRVDFGFAVFGSIL 183
           FN++L +  KMKH+S A+S+S R++  GIQPD++TLN LI+C+ +MG++ FGF+V   IL
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 184 KRGFEPNAVT 213
           KRG+ P+ VT
Sbjct: 122 KRGYPPDTVT 131



 Score = 45.8 bits (107), Expect(2) = 2e-23
 Identities = 18/51 (35%), Positives = 34/51 (66%)
 Frame = +2

Query: 209 LLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQFPPNVHIYTML 361
           LL  G+  N+VSY T++NG+CK  ++  A++ +R ++ +   PNV +Y+ +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 205


>ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score = 86.7 bits (213), Expect(2) = 5e-23
 Identities = 37/70 (52%), Positives = 54/70 (77%)
 Frame = +1

Query: 4   FNQLLAALVKMKHFSVALSMSKRMDTAGIQPDIVTLNTLISCYSNMGRVDFGFAVFGSIL 183
           FN++L +  KMKH+S A+S+S R++  GIQPD+ TLN LI+C+ +MG++ FGF+V   IL
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL 369

Query: 184 KRGFEPNAVT 213
           KRG+ P+ VT
Sbjct: 370 KRGYPPSTVT 379



 Score = 45.8 bits (107), Expect(2) = 5e-23
 Identities = 18/51 (35%), Positives = 34/51 (66%)
 Frame = +2

Query: 209 LLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQFPPNVHIYTML 361
           LL  G+  N+VSY T++NG+CK  ++  A++ +R ++ +   PNV +Y+ +
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453


>ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score = 87.4 bits (215), Expect(2) = 2e-22
 Identities = 35/70 (50%), Positives = 56/70 (80%)
 Frame = +1

Query: 4   FNQLLAALVKMKHFSVALSMSKRMDTAGIQPDIVTLNTLISCYSNMGRVDFGFAVFGSIL 183
           FN++L +  K+KH+S A+S+S R++  GIQPD++TLN LI+C+ +MG++ FGF+V   IL
Sbjct: 62  FNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 184 KRGFEPNAVT 213
           KRG++P+ +T
Sbjct: 122 KRGYQPHTIT 131



 Score = 43.5 bits (101), Expect(2) = 2e-22
 Identities = 18/51 (35%), Positives = 33/51 (64%)
 Frame = +2

Query: 209 LLENGYPCNEVSYGTVMNGICKSVNSTAALQFMRAMEKKQFPPNVHIYTML 361
           LL  G   ++VSYGT++NG+CK  ++  A++ +R ++ +   PNV +Y  +
Sbjct: 155 LLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTI 205