BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008147
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc...   219   1e-54
emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]   219   1e-54
ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|2...   209   8e-52
sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase,...   206   7e-51
pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix O...   198   2e-48

>ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis vinifera]
            gi|296090240|emb|CBI40059.3| unnamed protein product
            [Vitis vinifera]
          Length = 508

 Score =  219 bits (558), Expect = 1e-54
 Identities = 116/188 (61%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
 Frame = -1

Query: 1132 LSTKSKFRLIMEPFLWRSSVKNDISLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFVAA 953
            LS KSKF++I+EPFLW+   K+D+S + S++  K+SV  FF+RHFGKEVVDYLIDPFVA 
Sbjct: 124  LSAKSKFQIILEPFLWK---KSDLS-KVSDDHMKESVGGFFQRHFGKEVVDYLIDPFVAG 179

Query: 952  TSAADLDSVSMPHAFPELWNLEKTFGSVIVGAIRSKLFGQKEKKGKMEPYSGKKNAQSGP 773
            TS  D +S+SM H FPELWNLEK FGS+I GA+ SKL  ++EK+G+ +  S KK  Q G 
Sbjct: 180  TSGGDPESLSMHHTFPELWNLEKRFGSIIAGAVLSKLSAKREKRGETKGSSEKKKRQRGS 239

Query: 772  FSFHGGMQSLANMLCKELG-DGLKLNSKVLSLSCSLDENSISDNWSVSYATNHKKPSPDQ 596
            FSF GGMQ+L + LCKELG D L+L SKVLSLS S  E S  +NWSV+YA+N  K S D 
Sbjct: 240  FSFQGGMQTLTDTLCKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAYASNPGKQSKDL 299

Query: 595  SFDAVIMT 572
            SFDAVIMT
Sbjct: 300  SFDAVIMT 307


>emb|CAN69962.1| hypothetical protein VITISV_008740 [Vitis vinifera]
          Length = 809

 Score =  219 bits (558), Expect = 1e-54
 Identities = 116/188 (61%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
 Frame = -1

Query: 1132 LSTKSKFRLIMEPFLWRSSVKNDISLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFVAA 953
            LS KSKF++I+EPFLW+   K+D+S + S++  K+SV  FF+RHFGKEVVDYLIDPFVA 
Sbjct: 136  LSAKSKFQIILEPFLWK---KSDLS-KVSDDHMKESVGGFFQRHFGKEVVDYLIDPFVAG 191

Query: 952  TSAADLDSVSMPHAFPELWNLEKTFGSVIVGAIRSKLFGQKEKKGKMEPYSGKKNAQSGP 773
            TS  D +S+SM H FPELWNLEK FGS+I GA+ SKL  ++EK+G+ +  S KK  Q G 
Sbjct: 192  TSGGDPESLSMHHTFPELWNLEKRFGSIIAGAVLSKLSAKREKRGETKGSSEKKKRQRGS 251

Query: 772  FSFHGGMQSLANMLCKELG-DGLKLNSKVLSLSCSLDENSISDNWSVSYATNHKKPSPDQ 596
            FSF GGMQ+L + LCKELG D L+L SKVLSLS S  E S  +NWSV+YA+N  K S D 
Sbjct: 252  FSFQGGMQTLTDTLCKELGKDKLRLKSKVLSLSYSHGEKSALENWSVAYASNPGKQSKDL 311

Query: 595  SFDAVIMT 572
            SFDAVIMT
Sbjct: 312  SFDAVIMT 319


>ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|222845865|gb|EEE83412.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  209 bits (533), Expect = 8e-52
 Identities = 111/189 (58%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
 Frame = -1

Query: 1135 FLSTKSKFRLIMEPFLWRSSVKNDISLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFVA 956
            FLS +SK ++I+EPFLW+   KN+ S + S+ D ++SV +FF+RHFGKEVVDYLIDPFVA
Sbjct: 123  FLSAQSKLQIILEPFLWK---KNESS-KVSDADIQESVGEFFQRHFGKEVVDYLIDPFVA 178

Query: 955  ATSAADLDSVSMPHAFPELWNLEKTFGSVIVGAIRSKLFGQKEKKGKMEPYSGKKNAQSG 776
             TSA D +S+S  H FP+LWNLEK FGS+I GA+++KL  +KEK G+ +  S KK  Q G
Sbjct: 179  GTSAGDPESLSARHNFPDLWNLEKRFGSIIAGAVKAKLSAKKEKNGEKKGSSEKKKRQHG 238

Query: 775  PFSFHGGMQSLANMLCKELG-DGLKLNSKVLSLSCSLDENSISDNWSVSYATNHKKPSPD 599
             FSF GGMQ+L + LC ELG DG+KL SKVLSLS S D  S  +NWSVSYA+   K +  
Sbjct: 239  SFSFLGGMQTLTDTLCTELGKDGVKLESKVLSLSYSYDGKSTFENWSVSYASKGGKHAQA 298

Query: 598  QSFDAVIMT 572
             S+DAVIMT
Sbjct: 299  SSYDAVIMT 307


>sp|O24164.1|PPOM_TOBAC RecName: Full=Protoporphyrinogen oxidase, mitochondrial; AltName:
            Full=PX-2; AltName: Full=Protoporphyrinogen IX oxidase
            isozyme II; Short=PPO II; Short=PPX II
            gi|2370335|emb|CAA73866.1| protoporphyrinogen oxidase
            [Nicotiana tabacum] gi|3929920|dbj|BAA34712.1|
            mitochondrial protoporphyrinogen oxidase [Nicotiana
            tabacum] gi|4105188|gb|AAD02291.1| protoporphyrinogen
            oxidase PX-2 [Nicotiana tabacum]
          Length = 504

 Score =  206 bits (525), Expect = 7e-51
 Identities = 108/189 (57%), Positives = 135/189 (71%), Gaps = 1/189 (0%)
 Frame = -1

Query: 1135 FLSTKSKFRLIMEPFLWRSSVKNDISLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFVA 956
            FLST SK ++++EP LW++   + +S      DS +SV  FF+RHFGKEVVDYLIDPFVA
Sbjct: 121  FLSTGSKLQMLLEPILWKNKKLSQVS------DSHESVSGFFQRHFGKEVVDYLIDPFVA 174

Query: 955  ATSAADLDSVSMPHAFPELWNLEKTFGSVIVGAIRSKLFGQKEKKGKMEPYSGKKNAQSG 776
             T   D DS+SM H+FPELWNLEK FGSVI+GAIRSKL  + EKK      S  K  Q G
Sbjct: 175  GTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRG 234

Query: 775  PFSFHGGMQSLANMLCKEL-GDGLKLNSKVLSLSCSLDENSISDNWSVSYATNHKKPSPD 599
             FSF GGMQ+L + +CK+L  D L+LNS+VL LSCS  E+S  D+WS+  A+ HK+ S +
Sbjct: 235  SFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEE 294

Query: 598  QSFDAVIMT 572
            +SFDAVIMT
Sbjct: 295  ESFDAVIMT 303


>pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix Oxidase
            gi|48425679|pdb|1SEZ|B Chain B, Crystal Structure Of
            Protoporphyrinogen Ix Oxidase
          Length = 504

 Score =  198 bits (504), Expect = 2e-48
 Identities = 105/189 (55%), Positives = 131/189 (69%), Gaps = 1/189 (0%)
 Frame = -1

Query: 1135 FLSTKSKFRLIMEPFLWRSSVKNDISLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFVA 956
            FLST SK + ++EP LW++   + +S      DS +SV  FF+RHFGKEVVDYLIDPFVA
Sbjct: 121  FLSTGSKLQXLLEPILWKNKKLSQVS------DSHESVSGFFQRHFGKEVVDYLIDPFVA 174

Query: 955  ATSAADLDSVSMPHAFPELWNLEKTFGSVIVGAIRSKLFGQKEKKGKMEPYSGKKNAQSG 776
             T   D DS+S  H+FPELWNLEK FGSVI+GAIRSKL  + EKK      S  K  Q G
Sbjct: 175  GTCGGDPDSLSXHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRG 234

Query: 775  PFSFHGGMQSLANMLCKEL-GDGLKLNSKVLSLSCSLDENSISDNWSVSYATNHKKPSPD 599
             FSF GG Q+L + +CK+L  D L+LNS+VL LSCS  E+S  D+WS+  A+ HK+ S +
Sbjct: 235  SFSFLGGXQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEE 294

Query: 598  QSFDAVIMT 572
            +SFDAVI T
Sbjct: 295  ESFDAVIXT 303