BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008145
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01410.1| unnamed protein product [Arabidopsis thaliana]        100   1e-27
ref|NP_187924.2| ribosomal RNA small subunit methyltransferase B...   100   2e-27
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   103   9e-27
emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]   103   9e-27
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-26

>dbj|BAB01410.1| unnamed protein product [Arabidopsis thaliana]
          Length = 531

 Score =  100 bits (250), Expect(2) = 1e-27
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = -2

Query: 169 KSSGANEMGYVERTLGFCTRKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDER 2
           K SG+NEM YVERT+GF TR LDDRDLRLVTD+VGGTIRWRRYLDHLI +LCH+ER
Sbjct: 91  KGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTIRWRRYLDHLIGSLCHNER 146



 Score = 47.0 bits (110), Expect(2) = 1e-27
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -3

Query: 249 GESMISALRLMRIEYGGAFADLLNTKGK 166
           G   +SA+RLMRIEYGGAFADLLN KGK
Sbjct: 64  GAYTVSAVRLMRIEYGGAFADLLNEKGK 91


>ref|NP_187924.2| ribosomal RNA small subunit methyltransferase B [Arabidopsis
           thaliana] gi|18176252|gb|AAL60011.1| putative sun
           protein fmu [Arabidopsis thaliana]
           gi|21436219|gb|AAM51397.1| putative sun protein fmu
           [Arabidopsis thaliana] gi|110740623|dbj|BAE98415.1|
           putative sun (fmu) protein [Arabidopsis thaliana]
           gi|332641785|gb|AEE75306.1| ribosomal RNA small subunit
           methyltransferase B [Arabidopsis thaliana]
          Length = 523

 Score =  100 bits (250), Expect(2) = 2e-27
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = -2

Query: 169 KSSGANEMGYVERTLGFCTRKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDER 2
           K SG+NEM YVERT+GF TR LDDRDLRLVTD+VGGTIRWRRYLDHLI +LCH+ER
Sbjct: 83  KGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTIRWRRYLDHLIGSLCHNER 138



 Score = 46.2 bits (108), Expect(2) = 2e-27
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = -3

Query: 237 ISALRLMRIEYGGAFADLLNTKGK 166
           +SA+RLMRIEYGGAFADLLN KGK
Sbjct: 60  VSAVRLMRIEYGGAFADLLNEKGK 83


>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  103 bits (256), Expect(2) = 9e-27
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -2

Query: 169 KSSGANEMGYVERTLGFCTRKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDER 2
           K SG NEMGYVERTLGF TR LDDRDLRLVTDIVGG+IRWRRYLDHLIV+LCHD +
Sbjct: 85  KGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSK 140



 Score = 42.0 bits (97), Expect(2) = 9e-27
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -3

Query: 237 ISALRLMRIEYGGAFADLLNTKGK 166
           +SA+RLMRIE GGAFADLLN +GK
Sbjct: 62  VSAVRLMRIELGGAFADLLNERGK 85


>emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]
          Length = 324

 Score =  103 bits (256), Expect(2) = 9e-27
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -2

Query: 169 KSSGANEMGYVERTLGFCTRKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDER 2
           K SG NEMGYVERTLGF TR LDDRDLRLVTDIVGG+IRWRRYLDHLIV+LCHD +
Sbjct: 85  KGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSK 140



 Score = 42.0 bits (97), Expect(2) = 9e-27
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -3

Query: 237 ISALRLMRIEYGGAFADLLNTKGK 166
           +SA+RLMRIE GGAFADLLN +GK
Sbjct: 62  VSAVRLMRIELGGAFADLLNERGK 85


>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  100 bits (249), Expect(2) = 3e-26
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = -2

Query: 169 KSSGANEMGYVERTLGFCTRKLDDRDLRLVTDIVGGTIRWRRYLDHLIVALCHDER 2
           K SG NEMGYVERTLGF T+ LDDRDLRLVTDIVGGTIRWRRYLD+LI +LCHDE+
Sbjct: 87  KGSGDNEMGYVERTLGFRTKDLDDRDLRLVTDIVGGTIRWRRYLDYLIGSLCHDEK 142



 Score = 43.1 bits (100), Expect(2) = 3e-26
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -3

Query: 237 ISALRLMRIEYGGAFADLLNTKGK 166
           +SA+RLMRIE GGAFADLLN KGK
Sbjct: 64  VSAVRLMRIEMGGAFADLLNDKGK 87