BLASTX nr result

ID: Coptis25_contig00008144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008144
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|2...    73   6e-11
ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|2...    73   6e-11
ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257...    72   1e-10
ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus c...    67   3e-09

>ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|222859866|gb|EEE97413.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 44/116 (37%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
 Frame = -1

Query: 644 CGAVFARWLFAMEESEEKGKDREI----------QSVCXXXXXXXXXXXXXXXXXXXXXX 495
           CGAVFARWL A++E E KGK+ E+          +                         
Sbjct: 230 CGAVFARWLVAVQEGEGKGKEIELVVGEEVVEEERDERRRSYRRHIFEDIEFKEEEGHVF 289

Query: 494 XXXXXXXXXXXXXESICVPPKNALLLMRSRSAPFRMSSLANRFWESPATQHNGSQE 327
                         SIC+PPKNALLLMR RS P +M++LAN+FWESPA Q    +E
Sbjct: 290 EGGNAGLQEEEARVSICIPPKNALLLMRCRSDPVKMAALANKFWESPAPQDEEDEE 345


>ref|XP_002300403.1| predicted protein [Populus trichocarpa] gi|222847661|gb|EEE85208.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
 Frame = -1

Query: 644 CGAVFARWLFAMEESEEKGKD------REIQSVCXXXXXXXXXXXXXXXXXXXXXXXXXX 483
           CGAVFARWL A++E E KG++       E++                             
Sbjct: 186 CGAVFARWLVAVQEEEGKGREIELVVGEEVEEERDERRRSYRRHVYEEIEFKDEKFGGNE 245

Query: 482 XXXXXXXXXESICVPPKNALLLMRSRSAPFRMSSLANRFWESPATQ 345
                     +IC+PPKNALLLMR RS P +M++LAN+FWE+PA Q
Sbjct: 246 GLQEEEEARVNICIPPKNALLLMRCRSDPVKMAALANKFWEAPAPQ 291


>ref|XP_002333950.1| predicted protein [Populus trichocarpa] gi|222839181|gb|EEE77532.1|
           predicted protein [Populus trichocarpa]
          Length = 730

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
 Frame = -1

Query: 644 CGAVFARWLFAMEESEEKGKD------REIQSVCXXXXXXXXXXXXXXXXXXXXXXXXXX 483
           CGAVFARWL A++E E KG++       E++                             
Sbjct: 186 CGAVFARWLVAVQEEEGKGREIELVVGEEVEEERDERRRSYRRHVYEEIEFKDEKFGGNE 245

Query: 482 XXXXXXXXXESICVPPKNALLLMRSRSAPFRMSSLANRFWESPATQ 345
                     +IC+PPKNALLLMR RS P +M++LAN+FWE+PA Q
Sbjct: 246 GLQEEEEARVNICIPPKNALLLMRCRSDPVKMAALANKFWEAPAPQ 291


>ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera]
          Length = 741

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 45/101 (44%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
 Frame = -1

Query: 644 CGAVFARWLFAMEESEEKGKDREIQSVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 465
           CGAVFARWL A++E E   K REI+ V                                 
Sbjct: 211 CGAVFARWLVALQEGE---KGREIELVVGEDERAMEGFQRRHVLDDIEIKLEEGEVKDEA 267

Query: 464 XXXE----SICVPPKNALLLMRSRSAPFRMSSLANRFWESP 354
              E    SIC+PPKNALLLMR RS P RM++LANRFWESP
Sbjct: 268 VGGEEARVSICIPPKNALLLMRCRSDPMRMAALANRFWESP 308


>ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus communis]
           gi|223537477|gb|EEF39103.1| hypothetical protein
           RCOM_0649410 [Ricinus communis]
          Length = 731

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
 Frame = -1

Query: 644 CGAVFARWLFAM----------------EESEEKGKDREIQSVCXXXXXXXXXXXXXXXX 513
           CGAVFARWL A+                EE EE+ ++ E +                   
Sbjct: 204 CGAVFARWLMAVQEGDDRKRREIELVVGEEVEEEEEEEEEEDFTERRRSYRRHVFEEIEF 263

Query: 512 XXXXXXXXXXXXXXXXXXXESICVPPKNALLLMRSRSAPFRMSSLANRFWESPATQHNGS 333
                               SIC+PPKNALLLMR RS P +M++LAN+FWE+PA  +N +
Sbjct: 264 NEEKFGVGNESIQDEEAARVSICIPPKNALLLMRCRSDPVKMAALANKFWEAPA-PNNEN 322

Query: 332 QE 327
           QE
Sbjct: 323 QE 324


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