BLASTX nr result

ID: Coptis25_contig00008139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008139
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur pr...   562   e-158
ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago ...   553   e-155
ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communi...   548   e-153
ref|NP_001242180.1| uncharacterized protein LOC100778826 [Glycin...   543   e-152
ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur pr...   539   e-151

>ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein
            [Vitis vinifera] gi|297740110|emb|CBI30292.3| unnamed
            protein product [Vitis vinifera]
          Length = 344

 Score =  562 bits (1448), Expect = e-158
 Identities = 266/370 (71%), Positives = 301/370 (81%), Gaps = 2/370 (0%)
 Frame = +3

Query: 75   GLSLNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWL 254
            GL L E+Q+LEGH D+VWS+AWNPT+       +LASCSGDKTVRIWQ++PS   +  W 
Sbjct: 7    GLELKEIQRLEGHNDKVWSLAWNPTS------TLLASCSGDKTVRIWQRSPS---TSSWH 57

Query: 255  CKAILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSV 434
            CKA+L+ETHTRTVRSCAWSPSGKLLATASFDATTAIWE +GDDFECV+TLEGHENEVKSV
Sbjct: 58   CKAVLEETHTRTVRSCAWSPSGKLLATASFDATTAIWELIGDDFECVSTLEGHENEVKSV 117

Query: 435  SWNSSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYD 614
            SWN+SGSLLATCSRDKSVWIWEV PGNEF+CVSVL GHTQDVKMVQWHP MDVLFSC YD
Sbjct: 118  SWNASGSLLATCSRDKSVWIWEVQPGNEFECVSVLQGHTQDVKMVQWHPIMDVLFSCSYD 177

Query: 615  NTIKV*HYFVMLSDFR**MCVFCFVYFQVWADDRDSDDWECLQTLNEANNGHSSTVWALS 794
            NT+K                        +WA+D DSDDW C+QTL E+NNGH+STVWALS
Sbjct: 178  NTVK------------------------IWAEDGDSDDWHCVQTLGESNNGHTSTVWALS 213

Query: 795  FNSAGDKMVTCSDDLTLKIWGTDG--PMNGDEFAPWRHLCTLSGVHDRTIFSIHWSREGV 968
            FN  GDKMVTCSDDLT+KIW TD      G+ +APW+HLCTLSG HDRTIFS HWSREG+
Sbjct: 214  FNPEGDKMVTCSDDLTVKIWDTDSITMQAGEGYAPWKHLCTLSGYHDRTIFSAHWSREGI 273

Query: 969  IASAAADDAIRLFADESDGSVEGPSYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDG 1148
            IA+ AADDAIR F +  DG V+GP YK++LKKE+AHDMD+N+VQWSS ENRLLASASDDG
Sbjct: 274  IATGAADDAIRFFVESKDGLVDGPLYKLMLKKEQAHDMDINSVQWSSGENRLLASASDDG 333

Query: 1149 TIKIWELTSL 1178
            TIKIWEL S+
Sbjct: 334  TIKIWELASI 343


>ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago truncatula]
            gi|355500830|gb|AES82033.1| hypothetical protein
            MTR_7g104550 [Medicago truncatula]
          Length = 344

 Score =  553 bits (1424), Expect = e-155
 Identities = 263/368 (71%), Positives = 297/368 (80%), Gaps = 2/368 (0%)
 Frame = +3

Query: 78   LSLNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLC 257
            L L EVQKLEGHTDRVWS+ WNP TG+AGIP + ASCSGDKTVRIW+QN S  L   + C
Sbjct: 4    LELKEVQKLEGHTDRVWSLDWNPATGHAGIPLVFASCSGDKTVRIWEQNLSTNL---FSC 60

Query: 258  KAILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVS 437
            KA L+ETHTRTVRSCAWSPSGKLLATASFDATTAIWE VG +FECV+TLEGHENEVKSVS
Sbjct: 61   KATLEETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGEFECVSTLEGHENEVKSVS 120

Query: 438  WNSSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDN 617
            WN+SG+LLATCSRDKSVWIWEV PGNEF+CVSVL GHTQDVKMV+WHP  D+LFSC YDN
Sbjct: 121  WNASGTLLATCSRDKSVWIWEVQPGNEFECVSVLQGHTQDVKMVRWHPTEDILFSCSYDN 180

Query: 618  TIKV*HYFVMLSDFR**MCVFCFVYFQVWADDRDSDDWECLQTLNEANNGHSSTVWALSF 797
             IK                        VWAD+ DSDDW+C+QTL E NNGH+STVWALSF
Sbjct: 181  NIK------------------------VWADEGDSDDWQCVQTLGEPNNGHTSTVWALSF 216

Query: 798  NSAGDKMVTCSDDLTLKIWGTD--GPMNGDEFAPWRHLCTLSGVHDRTIFSIHWSREGVI 971
            N++GDKMVTCSDDLTLK+W T+  G  +G  FAPWRH+CTL+G HDRTIFS+HWSR G+ 
Sbjct: 217  NASGDKMVTCSDDLTLKVWETEHVGMQSGGGFAPWRHVCTLTGYHDRTIFSVHWSRGGIF 276

Query: 972  ASAAADDAIRLFADESDGSVEGPSYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGT 1151
            AS AADDAIRLF + ++  V+GP YK+LLKKEKAHDMD+N VQWS  E  LLASASDDGT
Sbjct: 277  ASGAADDAIRLFVENNESQVDGPLYKLLLKKEKAHDMDINYVQWSHGEKPLLASASDDGT 336

Query: 1152 IKIWELTS 1175
            IK+W+L S
Sbjct: 337  IKVWDLVS 344


>ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communis]
            gi|223531837|gb|EEF33655.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 349

 Score =  548 bits (1413), Expect = e-153
 Identities = 264/367 (71%), Positives = 296/367 (80%), Gaps = 2/367 (0%)
 Frame = +3

Query: 84   LNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLCKA 263
            L E+QKL GHTDRVWS+AWNP T + G PA+ ASCSGDKTVRIW+Q+PS    D   CKA
Sbjct: 10   LKEIQKLHGHTDRVWSLAWNPATRFGGAPAVFASCSGDKTVRIWEQSPSSCSFD---CKA 66

Query: 264  ILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVSWN 443
            +L+ETHTRTVRSCAWSPSGKLLATASFDATTAIWE +G DFECV+TLEGHENEVKSVSWN
Sbjct: 67   VLEETHTRTVRSCAWSPSGKLLATASFDATTAIWENIGGDFECVSTLEGHENEVKSVSWN 126

Query: 444  SSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDNTI 623
            +SGSLLATCSRDK+VWIWEV+PGNEF+C SVL GHTQDVKMV+WHP +DVLFSC YDNTI
Sbjct: 127  ASGSLLATCSRDKTVWIWEVMPGNEFECASVLQGHTQDVKMVKWHPNIDVLFSCSYDNTI 186

Query: 624  KV*HYFVMLSDFR**MCVFCFVYFQVWADDRDSDDWECLQTLNEANNGHSSTVWALSFNS 803
            K                        VWA+D D  DW C+QTL E+NNGH+STVWALSFN+
Sbjct: 187  K------------------------VWAEDGDG-DWHCVQTLGESNNGHTSTVWALSFNA 221

Query: 804  AGDKMVTCSDDLTLKIWGTD-GPM-NGDEFAPWRHLCTLSGVHDRTIFSIHWSREGVIAS 977
             GDKMVTCSDDLTLKIW TD G M +GD+ A W H+CTLSG HDRTIFS HWSREG+IAS
Sbjct: 222  EGDKMVTCSDDLTLKIWETDIGRMVSGDDHASWNHVCTLSGYHDRTIFSAHWSREGIIAS 281

Query: 978  AAADDAIRLFADESDGSVEGPSYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIK 1157
             AADD IR F +  D  V GPSY++LLKKEKAHDMD+N+VQW+  ENRLLASASDDGTIK
Sbjct: 282  GAADDGIRFFVESKDDLVNGPSYRLLLKKEKAHDMDINSVQWAPGENRLLASASDDGTIK 341

Query: 1158 IWELTSL 1178
            IWEL +L
Sbjct: 342  IWELATL 348


>ref|NP_001242180.1| uncharacterized protein LOC100778826 [Glycine max]
            gi|255637044|gb|ACU18854.1| unknown [Glycine max]
          Length = 352

 Score =  543 bits (1398), Expect = e-152
 Identities = 255/360 (70%), Positives = 292/360 (81%), Gaps = 2/360 (0%)
 Frame = +3

Query: 78   LSLNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLC 257
            + L  +Q+LEGHTD+VWS+AWNPTTG+AGIP + ASCSGDKTVRIW+QN S  L   W C
Sbjct: 2    MELKGIQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGL---WAC 58

Query: 258  KAILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVS 437
             A+LDETHTRTVRSCAWSPSGKLLATASFDATTAIWE VG DFECV+TLEGHENEVK VS
Sbjct: 59   TAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVSTLEGHENEVKCVS 118

Query: 438  WNSSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDN 617
            WN++G+LLATCSRDKSVWIWEVLPGNEF+CVSVL GH+QDVKMV+WHP  D+LFSC YDN
Sbjct: 119  WNAAGTLLATCSRDKSVWIWEVLPGNEFECVSVLQGHSQDVKMVKWHPTEDILFSCSYDN 178

Query: 618  TIKV*HYFVMLSDFR**MCVFCFVYFQVWADDRDSDDWECLQTLNEANNGHSSTVWALSF 797
            ++K                        VWAD+ DSDDW+C+QTL E NNGH+STVWALSF
Sbjct: 179  SVK------------------------VWADEGDSDDWQCVQTLGEPNNGHTSTVWALSF 214

Query: 798  NSAGDKMVTCSDDLTLKIWGTD--GPMNGDEFAPWRHLCTLSGVHDRTIFSIHWSREGVI 971
            N +GDKMVTCSDDLTLK+W T+  G  +G  FAPW HLCTLSG HDRTIFS+HWSREG+ 
Sbjct: 215  NVSGDKMVTCSDDLTLKVWETESVGTQSGGGFAPWTHLCTLSGYHDRTIFSVHWSREGIF 274

Query: 972  ASAAADDAIRLFADESDGSVEGPSYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGT 1151
            AS AAD+AIRLF D+++  V GP YK+LLKKEKAHDMD+N+VQWS  E  +LASASDDGT
Sbjct: 275  ASGAADNAIRLFVDDNESQVGGPLYKLLLKKEKAHDMDINSVQWSPGEKPVLASASDDGT 334



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 9/271 (3%)
 Frame = +3

Query: 393  VATLEGHENEVKSVSWNSSGS------LLATCSRDKSVWIWEV-LPGNEFDCVSVLTG-H 548
            +  LEGH ++V S++WN +        + A+CS DK+V IWE  L    + C +VL   H
Sbjct: 7    IQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAVLDETH 66

Query: 549  TQDVKMVQWHPFMDVLFSCGYDNTIKV*HYFVMLSDFR**MCVFCFVYFQVWADDRDSDD 728
            T+ V+   W P   +L +  +D T  +                        W  +    D
Sbjct: 67   TRTVRSCAWSPSGKLLATASFDATTAI------------------------W--ENVGGD 100

Query: 729  WECLQTLNEANNGHSSTVWALSFNSAGDKMVTCSDDLTLKIWGTDGPMNGDEFAPWRHLC 908
            +EC+ TL     GH + V  +S+N+AG  + TCS D ++ IW     + G+EF     + 
Sbjct: 101  FECVSTLE----GHENEVKCVSWNAAGTLLATCSRDKSVWIWEV---LPGNEF---ECVS 150

Query: 909  TLSGVHDRTIFSIHWS-REGVIASAAADDAIRLFADESDGSVEGPSYKMLLKKEKAHDMD 1085
             L G H + +  + W   E ++ S + D++++++ADE D S +    + L +    H   
Sbjct: 151  VLQG-HSQDVKMVKWHPTEDILFSCSYDNSVKVWADEGD-SDDWQCVQTLGEPNNGHTST 208

Query: 1086 VNAVQWSSKENRLLASASDDGTIKIWELTSL 1178
            V A+ ++   ++++ + SDD T+K+WE  S+
Sbjct: 209  VWALSFNVSGDKMV-TCSDDLTLKVWETESV 238


>ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur protein assembly
            protein-like [Cucumis sativus]
            gi|449500925|ref|XP_004161232.1| PREDICTED: probable
            cytosolic iron-sulfur protein assembly protein-like
            [Cucumis sativus]
          Length = 350

 Score =  539 bits (1388), Expect = e-151
 Identities = 253/367 (68%), Positives = 292/367 (79%), Gaps = 2/367 (0%)
 Frame = +3

Query: 84   LNEVQKLEGHTDRVWSVAWNPTTGYAGIPAMLASCSGDKTVRIWQQNPSDKLSDPWLCKA 263
            L E+ KLEGHTDRVWS+AWNP TG  GIP + ASCSGDKTVRIW+Q+PS   S  W CKA
Sbjct: 10   LKEIAKLEGHTDRVWSLAWNPATGVGGIPLVFASCSGDKTVRIWEQSPS---SGSWNCKA 66

Query: 264  ILDETHTRTVRSCAWSPSGKLLATASFDATTAIWEQVGDDFECVATLEGHENEVKSVSWN 443
            +L+ETHTRTVRSCAWSP+GKLLATASFDATTAIWE  G D+ECV+TLEGHENE+KSV+WN
Sbjct: 67   VLEETHTRTVRSCAWSPNGKLLATASFDATTAIWENTGGDYECVSTLEGHENEIKSVAWN 126

Query: 444  SSGSLLATCSRDKSVWIWEVLPGNEFDCVSVLTGHTQDVKMVQWHPFMDVLFSCGYDNTI 623
            +SGSLLATCSRD++VWIWEVLPGNE++CVSVL GHTQDVKMVQWHP MD+LFSC YDNT+
Sbjct: 127  ASGSLLATCSRDRTVWIWEVLPGNEYECVSVLQGHTQDVKMVQWHPTMDLLFSCSYDNTV 186

Query: 624  KV*HYFVMLSDFR**MCVFCFVYFQVWADDRDSDDWECLQTLNEANNGHSSTVWALSFNS 803
            K                        VWA D D+DDW C+QTL+E+NNGHSSTVWALSFN+
Sbjct: 187  K------------------------VWAGDDDNDDWHCVQTLDESNNGHSSTVWALSFNA 222

Query: 804  AGDKMVTCSDDLTLKIWGTDGPMNGDE--FAPWRHLCTLSGVHDRTIFSIHWSREGVIAS 977
             GDKMV+CSDDLTLKIW TD      E  ++PWRH CTLSG HDRTIFS+HWSR G+IAS
Sbjct: 223  TGDKMVSCSDDLTLKIWETDETKLHSEAGYSPWRHTCTLSGYHDRTIFSVHWSRNGIIAS 282

Query: 978  AAADDAIRLFADESDGSVEGPSYKMLLKKEKAHDMDVNAVQWSSKENRLLASASDDGTIK 1157
             AADDAIRLF +  +  ++  S+++L KKEKAH MDVN+VQWS  E  LLASASDDGTI+
Sbjct: 283  GAADDAIRLFVENQEKGIDRSSFQLLFKKEKAHSMDVNSVQWSPGEKVLLASASDDGTIR 342

Query: 1158 IWELTSL 1178
            IWEL  +
Sbjct: 343  IWELVPI 349


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