BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008132
         (4271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   117   2e-44
emb|CAN79490.1| hypothetical protein VITISV_033371 [Vitis vinifera]    99   1e-42
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    92   2e-42
emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera]    91   2e-42
emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]    91   8e-42

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  117 bits (293), Expect(2) = 2e-44
 Identities = 55/120 (45%), Positives = 83/120 (69%)
 Frame = -3

Query: 522 DLT*AILNFFRISRLPTSFNANFLVLIPKEKIANQINRFRSICLSNFTYKVITKILASRL 343
           D+  A+L+FF+   LP +FNAN ++LIPK   A+ ++++R+I L NF +K+I K+LA RL
Sbjct: 215 DVYEAVLDFFKNGWLPNNFNANSIILIPKTPNADSVDQYRTIALVNFKFKIINKVLADRL 274

Query: 342 GPIAERIVAKAKYGFIAHRNLHRAIGLASELINELKYKRFGGSVGIKLDITQAFDKLNWN 163
             I   I++K + GF+  RN+   I L SE IN L  K FGG++ +K+D+T+AFD LNW+
Sbjct: 275 AKILPSIISKEQRGFVQGRNIRDCIALTSEAINVLDNKSFGGNLALKIDVTKAFDTLNWD 334



 Score = 92.0 bits (227), Expect(2) = 2e-44
 Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
 Frame = -2

Query: 1225 FDSLRCGPSHPGFLKLVEKSWAEPLYGHSMFVLCQXXXXXXXXLEQWNKHDFGHLSXXXX 1046
            F  L+    H    KL+E  W   + G  ++VL           + WNK  FG++     
Sbjct: 5    FKFLKMWTLHDSCQKLIEDCWNVRVLGSPLYVLSSKL-------KVWNKDVFGNILIQVT 57

Query: 1045 XXXXXXXENQFMIEQNS-NDEQLSMEMVEQGSVVEALLQQEEQFWKQK*RAKWDSEVDRD 869
                   + Q  I  +  ND  ++ E + Q ++ +  LQ++E FW +K + KW    DR+
Sbjct: 58   QAEKKLSDIQNHINTSGHNDNLMNAEKIAQTNL-DLALQKQETFWVEKAKLKWHVGGDRN 116

Query: 868  TKYYHALVNMNRSRSLITEIENLQGETLTSQEDIGQFVVQQYSERFKNSKLELDEDLIQL 689
            TKY+H L  +     +I+ +   + E LT Q  I +           +  L ++E     
Sbjct: 117  TKYFHRLTKIKNKTKIISSLRKGE-EILTDQTRISE-----------HDHLLVEE----A 160

Query: 688  LPKAITEEDNMALTKTPTHEEVKKAVFELDPNSAPGADGFSGYFF*CCWH 539
            +PK +    N  LT  PT EEVK AVF+L+ + APG D F   FF   W+
Sbjct: 161  IPKLVDATTNRLLTMLPTKEEVKNAVFDLNSDDAPGPDVFGACFFQIYWN 210


>emb|CAN79490.1| hypothetical protein VITISV_033371 [Vitis vinifera]
          Length = 1341

 Score = 99.0 bits (245), Expect(3) = 1e-42
 Identities = 65/186 (34%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
 Frame = -2

Query: 1093 EQWNKHDFGHLSXXXXXXXXXXXENQFMIEQNS--NDEQLSMEMVEQGSVVEALLQQEEQ 920
            ++WNK  FG L             N   IEQ    N + LS     +G + E +L+ EE 
Sbjct: 858  KEWNKFSFGELKEKKKSILNDLA-NFDAIEQKGGLNSDLLSQRASRKGELEELILR-EEI 915

Query: 919  FWKQK*RAKWDSEVDRDTKYYHALVNMNRSRSLITEIENLQGETLTSQEDIGQFVVQQYS 740
             W+QK R KW  E D ++K+YH + N  R+R  I E+EN +G  L + E I + ++  Y 
Sbjct: 916  HWRQKSRVKWVKEGDCNSKFYHKMANGRRNRKYIKELENERGLLLKNAESITEEIL-HYF 974

Query: 739  ERFKNSKLELDEDLIQLLPKAITEEDNMALTKTPTHEEVKKAVFELDPNSAPGADGFSGY 560
            E+   S +     +  L    I+EE  + L    T EE+ KA+F+LD + APG DGF+  
Sbjct: 975  EKLYTSPIGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQLDRDKAPGPDGFTIA 1034

Query: 559  FF*CCW 542
             F  CW
Sbjct: 1035 VFQDCW 1040



 Score = 70.5 bits (171), Expect(3) = 1e-42
 Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = -3

Query: 522  DLT*AILNFFRISRLPTSFNANFLVLIPKEKIANQINRFRSICLSNFTYKVITKILASRL 343
            +L      F R   +  S NA+F+VL+PK+ +  +I+ FR I L    YK+ITK+L+ RL
Sbjct: 1046 ELVRVFAEFHRSGIINQSTNASFIVLLPKKSLTKRISNFRPISLITSLYKIITKVLSGRL 1105

Query: 342  GPIAERIVAKAKYGFIAHRNLHRAIGLASELINELKYKRFGGSVGI--KLDITQAFDKLN 169
              +    +   +  F+  R +  A+ +A+E+++E   +R  G  G+  K+D  +A+D + 
Sbjct: 1106 RGVLHETIHYTQGAFVQGRQILDAVLIANEIVDE---RRQSGEEGVVFKIDFEKAYDHVK 1162

Query: 168  WN 163
            W+
Sbjct: 1163 WD 1164



 Score = 54.7 bits (130), Expect(3) = 1e-42
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
 Frame = -1

Query: 1556 WILLGDFNAYLSHAEKKRG*KPTNAAVSDFRNALNDNYLMEAPSTGYNFTWWNKQHGIKR 1377
            W + GDFN     +EK  G   T  ++ DF + + +  L++ P    +FTW N Q     
Sbjct: 707  WCVSGDFNVIRRSSEKMGGSSLT-PSMRDFDSFIRECELLDPPLQKASFTWSNMQES--P 763

Query: 1376 IIGKLD*VLFNAEWSSK*PSWSYKAICRLSSDHCPLI-GRKKHVPKPRNTPFRFFKMWTL 1200
            +  +LD  L++ EW    P    +A+ + +SDH P++      + +P  T FRF  MW  
Sbjct: 764  VCKRLDSFLYSNEWGLLFPQGLQEALIKRTSDHWPIVTDTNPFMWEP--TSFRFENMWLQ 821

Query: 1199 PSRFSKTSR 1173
               F +  R
Sbjct: 822  HPNFKENFR 830


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 91.7 bits (226), Expect(3) = 2e-42
 Identities = 55/182 (30%), Positives = 89/182 (48%)
 Frame = -2

Query: 1087 WNKHDFGHLSXXXXXXXXXXXENQFMIEQNSNDEQLSMEMVEQGSVVEALLQQEEQFWKQ 908
            WNK  FG LS               + ++     +L  +   +   +E L+ +EE  W+Q
Sbjct: 1117 WNKASFGELSKRKEDILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQ 1176

Query: 907  K*RAKWDSEVDRDTKYYHALVNMNRSRSLITEIENLQGETLTSQEDIGQFVVQQYSERFK 728
            K R KW  E D ++K++H + N  R+R  I E+EN  G+ + + E I + ++ +Y E+  
Sbjct: 1177 KARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENENGQMMNNSESIKEEIL-RYFEKLY 1235

Query: 727  NSKLELDEDLIQLLPKAITEEDNMALTKTPTHEEVKKAVFELDPNSAPGADGFSGYFF*C 548
             S       +  L    I+ E  + L    T EE+ KA+F++D + APG DGF+   F  
Sbjct: 1236 TSPSGESWRVEGLDWSPISGESAVRLESPFTEEEICKAIFQMDRDKAPGPDGFTIAVFQD 1295

Query: 547  CW 542
            CW
Sbjct: 1296 CW 1297



 Score = 72.4 bits (176), Expect(3) = 2e-42
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
 Frame = -3

Query: 522  DLT*AILNFFRISRLPTSFNANFLVLIPKEKIANQINRFRSICLSNFTYKVITKILASRL 343
            DL      F R   +  S NA+F+VL+PK+ ++ +I+ FR I L    YK+I K+LA R+
Sbjct: 1303 DLVKVFTEFHRSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRI 1362

Query: 342  GPIAERIVAKAKYGFIAHRNLHRAIGLASELINELKYKRFGGSVGI--KLDITQAFDKLN 169
              +    +   +  F+  R +  A+ +A+E+++E   KR  G  G+  K+D  +A+D ++
Sbjct: 1363 REVLHETIHSTQGAFVQGRQILDAVLIANEIVDE---KRRSGEEGVVFKIDFEKAYDHVS 1419

Query: 168  WN 163
            W+
Sbjct: 1420 WD 1421



 Score = 58.9 bits (141), Expect(3) = 2e-42
 Identities = 38/117 (32%), Positives = 60/117 (51%)
 Frame = -1

Query: 1556 WILLGDFNAYLSHAEKKRG*KPTNAAVSDFRNALNDNYLMEAPSTGYNFTWWNKQHGIKR 1377
            W + GDFN     +EK  G + T  ++ DF + ++D  L++ P    +FTW N Q  +  
Sbjct: 964  WCVGGDFNVIRRSSEKLGGSRLT-PSMKDFDDFISDCELIDLPLRSASFTWSNMQ--VNP 1020

Query: 1376 IIGKLD*VLFNAEWSSK*PSWSYKAICRLSSDHCPLIGRKKHVPKPRNTPFRFFKMW 1206
            +  +LD  L++ EW    P      + R +SDH P++  + +  K   TPFRF  MW
Sbjct: 1021 VCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIV-LETNPFKWGPTPFRFENMW 1076


>emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera]
          Length = 1866

 Score = 90.5 bits (223), Expect(3) = 2e-42
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
 Frame = -2

Query: 1093 EQWNKHDFGHLSXXXXXXXXXXXENQFMIEQNSNDEQLSMEMVEQGSVVEALLQQEEQFW 914
            ++WNK  FG LS               + ++    ++L ++       +E L+ +EE  W
Sbjct: 1020 KEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEELILREEIHW 1079

Query: 913  KQK*RAKWDSEVDRDTKYYHALVNMNRSRSLITEIENLQGETLTSQEDIGQFVVQQYSER 734
            +QK R KW  E D ++K++H + N  R+R  I E+EN  G  L + E I + +++ + + 
Sbjct: 1080 RQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKEEILKYFEKL 1139

Query: 733  FKNSKLELDEDLIQLLPKAITEEDNMALTKTP-THEEVKKAVFELDPNSAPGADGFSGYF 557
            +     E     ++ L  +  + ++ +  ++P T EE+ KA+F++D + APG DGF+   
Sbjct: 1140 YACPSRE--SWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAPGPDGFTIAV 1197

Query: 556  F*CCW 542
            F  CW
Sbjct: 1198 FQDCW 1202



 Score = 74.3 bits (181), Expect(3) = 2e-42
 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
 Frame = -3

Query: 522  DLT*AILNFFRISRLPTSFNANFLVLIPKEKIANQINRFRSICLSNFTYKVITKILASRL 343
            DL      F R   +  S NA+F+VL+PK+ I+ +I+ FR I L    YK+I K+LA RL
Sbjct: 1208 DLVRVFAEFHRSGIINQSTNASFIVLLPKKSISRRISDFRPISLITSLYKIIAKVLAGRL 1267

Query: 342  GPIAERIVAKAKYGFIAHRNLHRAIGLASELINELKYKRFGGSVGI--KLDITQAFDKLN 169
              +    +   +  F+  R +  A+ +A+E+++E   KR  G  G+  K+D  +A+D L+
Sbjct: 1268 RGVLHETIHSTQGAFVQGRQILDAVLIANEIVDE---KRRTGEEGVVFKIDFEKAYDHLS 1324

Query: 168  WN 163
            W+
Sbjct: 1325 WD 1326



 Score = 58.2 bits (139), Expect(3) = 2e-42
 Identities = 39/125 (31%), Positives = 60/125 (48%)
 Frame = -1

Query: 1556 WILLGDFNAYLSHAEKKRG*KPTNAAVSDFRNALNDNYLMEAPSTGYNFTWWNKQHGIKR 1377
            W + GDFN     +EK  G + T   + DF   + D  L+++P    ++TW N Q     
Sbjct: 869  WCVGGDFNVIRRSSEKLGGSRLT-PCMKDFDEFIRDCELIDSPLRSVSYTWSNMQE--NP 925

Query: 1376 IIGKLD*VLFNAEWSSK*PSWSYKAICRLSSDHCPLIGRKKHVPKPRNTPFRFFKMWTLP 1197
            +  +LD  L++ EW    P      + R +SDH P++  + +  K   TPFRF  MW   
Sbjct: 926  VCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIV-LETNPFKWGPTPFRFENMWLQH 984

Query: 1196 SRFSK 1182
            S F +
Sbjct: 985  SSFKE 989


>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score = 90.5 bits (223), Expect(3) = 8e-42
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
 Frame = -2

Query: 1093 EQWNKHDFGHLSXXXXXXXXXXXENQFMIEQNSNDEQLSMEMVEQGSVVEALLQQEEQFW 914
            ++WNK  FG LS               + ++    ++L ++       +E L+ +EE  W
Sbjct: 1042 KEWNKTSFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEELILREEIHW 1101

Query: 913  KQK*RAKWDSEVDRDTKYYHALVNMNRSRSLITEIENLQGETLTSQEDIGQFVVQQYSER 734
            +QK R KW  E D ++K++H + N  R+R  I E+EN  G  L + E I + +++ + + 
Sbjct: 1102 RQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKEEILKYFEKL 1161

Query: 733  FKNSKLELDEDLIQLLPKAITEEDNMALTKTP-THEEVKKAVFELDPNSAPGADGFSGYF 557
            +     E     ++ L  +  + ++ +  ++P T EE+ KA+F++D + APG DGF+   
Sbjct: 1162 YACPSRE--SWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAPGPDGFTIAV 1219

Query: 556  F*CCW 542
            F  CW
Sbjct: 1220 FQDCW 1224



 Score = 72.4 bits (176), Expect(3) = 8e-42
 Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = -3

Query: 522  DLT*AILNFFRISRLPTSFNANFLVLIPKEKIANQINRFRSICLSNFTYKVITKILASRL 343
            DL      F R   +  S NA+F+VL+PK+ I+ +I+ FR I L    YK+I K+LA RL
Sbjct: 1230 DLVRVFAEFHRSGIINQSTNASFIVLLPKKSISRRISDFRPISLITSLYKIIAKVLAGRL 1289

Query: 342  GPIAERIVAKAKYGFIAHRNLHRAIGLASELINELKYKRFGGSVGI--KLDITQAFDKLN 169
              +    +   +  F+  R +  A+ +A+E+++E   KR  G  G+  K+D  +A+D  +
Sbjct: 1290 RGVLHETIHSTQGAFVQGRQILDAVLIANEIVDE---KRRTGEEGVVFKIDFEKAYDHXS 1346

Query: 168  WN 163
            W+
Sbjct: 1347 WD 1348



 Score = 58.2 bits (139), Expect(3) = 8e-42
 Identities = 39/125 (31%), Positives = 60/125 (48%)
 Frame = -1

Query: 1556 WILLGDFNAYLSHAEKKRG*KPTNAAVSDFRNALNDNYLMEAPSTGYNFTWWNKQHGIKR 1377
            W + GDFN     +EK  G + T   + DF   + D  L+++P    ++TW N Q     
Sbjct: 891  WCVGGDFNVIRRSSEKLGGSRLT-PCMKDFDEFIRDCELIDSPLRSVSYTWSNMQE--NP 947

Query: 1376 IIGKLD*VLFNAEWSSK*PSWSYKAICRLSSDHCPLIGRKKHVPKPRNTPFRFFKMWTLP 1197
            +  +LD  L++ EW    P      + R +SDH P++  + +  K   TPFRF  MW   
Sbjct: 948  VCKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPIV-LETNPFKWGPTPFRFENMWLQH 1006

Query: 1196 SRFSK 1182
            S F +
Sbjct: 1007 SSFKE 1011