BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008120
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|2...   253   7e-65
ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [...   244   4e-62
emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]   229   1e-57
ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|...   222   1e-55
gb|ACJ70052.1| RIN4-like protein [Malus x domestica]                  219   1e-54

>ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|222843524|gb|EEE81071.1|
            predicted protein [Populus trichocarpa]
          Length = 264

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/270 (51%), Positives = 172/270 (63%), Gaps = 9/270 (3%)
 Frame = -1

Query: 1185 QHSRVPKFGNWENEQDVPYTQYFDKARKGKNAGKMINPNDPQDSLD-VDAGTRPIQAPPF 1009
            Q S VPKFGNWE+E++VPYT YFDKARKG+  GKMINPNDPQ++ D V     P QAPPF
Sbjct: 3    QRSHVPKFGNWESEENVPYTAYFDKARKGRTGGKMINPNDPQENPDLVSDYAAPDQAPPF 62

Query: 1008 RNGVEPDLQVGEGAQKPKHERRISREDGEFRRLTDSPARHDALGRKTSEHH-------RV 850
            R    P+   G+GA +  HE R SRE+ + ++  +SPAR++ L R+ S          R 
Sbjct: 63   RAKAPPEEAAGQGAVRQAHEHRTSREESDLKQFANSPARNENLNRRASYEPAPQRYGGRG 122

Query: 849  ASSEEIPKRSGRQSGGHDRSIERSPLHQHYQTRTXXXXXXXXXXSWERKSS-EGSHGLAP 673
             S  E  KR  R S G + S+E+SP+H H   R           SWE K+S +GSHG   
Sbjct: 123  PSFGEAHKRPARYSIGSENSMEQSPIHNH--ARISGRNSGAPSPSWEGKNSNDGSHG--- 177

Query: 672  NTPGRSRLRPGARGDETPDRGAAVPKFGEWDENNPASADGFTHIFNKMREEKLTGSGNSA 493
             TPGRSRLRP  +GDE+PD+GAAVPKFG+WDENNP+SADG+THIFNK+REEK  G G   
Sbjct: 178  -TPGRSRLRP--KGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREEKQIGEGKMP 234

Query: 492  TVPDEQQPYSGGHKPDNSNSTGCFCFPWGK 403
             +P E    +   K   S+S  C CFPWG+
Sbjct: 235  GMPTESS-NAYVRKQTPSDSAKCCCFPWGR 263


>ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
          Length = 261

 Score =  244 bits (622), Expect = 4e-62
 Identities = 128/268 (47%), Positives = 169/268 (63%), Gaps = 6/268 (2%)
 Frame = -1

Query: 1185 QHSRVPKFGNWENEQDVPYTQYFDKARKGKNAGKMINPNDPQDSLDVDAGTRPIQAPPFR 1006
            Q S VPKFGNWE+E++VPYT YFDKARKG+   K+INPNDPQ++ D+ +        P R
Sbjct: 3    QRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEARSPPR 62

Query: 1005 NGVEPDLQVGEGAQKPKHERRISREDGEFRRLTDSPARHDALGRKTSE---HHRVAS--- 844
               E +  +G   Q+  HE R+S+EDG+ +++TDSPAR+D LGR+ S    H R      
Sbjct: 63   TRAEQEESIG---QQVTHEHRLSKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRGM 119

Query: 843  SEEIPKRSGRQSGGHDRSIERSPLHQHYQTRTXXXXXXXXXXSWERKSSEGSHGLAPNTP 664
            +     R  R SGG + SI+RSPLH H+Q R             +  S + SHG    TP
Sbjct: 120  NSGETYRKPRTSGGSEHSIDRSPLHPHHQARIAGRGTGSPSWEGKGSSYDSSHG----TP 175

Query: 663  GRSRLRPGARGDETPDRGAAVPKFGEWDENNPASADGFTHIFNKMREEKLTGSGNSATVP 484
            GRSR++P  RGDE+PD+GAAVPKFG+WDENNP+SADG+THIFNK+REE+ TG+       
Sbjct: 176  GRSRMKP-TRGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREERQTGAATRVPGM 234

Query: 483  DEQQPYSGGHKPDNSNSTGCFCFPWGKR 400
              +  Y    K + S+S  C CFPWG++
Sbjct: 235  ASEPSYQTNRKHNTSSSKSC-CFPWGRK 261


>emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]
          Length = 599

 Score =  229 bits (583), Expect = 1e-57
 Identities = 122/257 (47%), Positives = 161/257 (62%), Gaps = 6/257 (2%)
 Frame = -1

Query: 1185 QHSRVPKFGNWENEQDVPYTQYFDKARKGKNAGKMINPNDPQDSLDVDAGTRPIQAPPFR 1006
            Q S VPKFGNWE+E++VPYT YFDKARKG+   K+INPNDPQ++ D+ +        P R
Sbjct: 10   QRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEARSPPR 69

Query: 1005 NGVEPDLQVGEGAQKPKHERRISREDGEFRRLTDSPARHDALGRKTSE---HHRVAS--- 844
               E +  +G   Q+  HE R+S+EDG+ +++TDSPAR+D LGR+ S    H R      
Sbjct: 70   TRAEQEESIG---QQVTHEHRLSKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRGM 126

Query: 843  SEEIPKRSGRQSGGHDRSIERSPLHQHYQTRTXXXXXXXXXXSWERKSSEGSHGLAPNTP 664
            +     R  R SGG + SI+RSPLH H+Q R             +  S + SHG    TP
Sbjct: 127  NSGETYRKPRTSGGSEHSIDRSPLHPHHQARIAGRGTGSPSWEGKGSSYDSSHG----TP 182

Query: 663  GRSRLRPGARGDETPDRGAAVPKFGEWDENNPASADGFTHIFNKMREEKLTGSGNSATVP 484
            GRSR++P  RGDE+PD+GAAVPKFG+WDENNP+SADG+THIFNK+REE+ TG+       
Sbjct: 183  GRSRMKP-TRGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREERQTGAATRVPGM 241

Query: 483  DEQQPYSGGHKPDNSNS 433
              +  Y    K + S+S
Sbjct: 242  ASEPSYQTNRKHNTSSS 258


>ref|NP_001235252.1| RIN4d protein [Glycine max] gi|255648162|gb|ACU24535.1| unknown
            [Glycine max] gi|300079889|gb|ADJ67470.1| RIN4d protein
            [Glycine max]
          Length = 248

 Score =  222 bits (566), Expect = 1e-55
 Identities = 126/263 (47%), Positives = 169/263 (64%), Gaps = 1/263 (0%)
 Frame = -1

Query: 1185 QHSRVPKFGNWENEQDVPYTQYFDKARKGKNAGKMINPNDPQDSLDVDAGTRPIQAPPFR 1006
            QHS VPKFGN E+E +V  T + DKA+KG++  KMINPND +++ D+ +      + P  
Sbjct: 3    QHSNVPKFGNQESEDNVLDTAHSDKAQKGQSGSKMINPNDTKENSDIVSSADLPHSKPRV 62

Query: 1005 NGVEPDLQVGEGAQKPKHERRISREDGEFRRLTDSPARHDALGRKTSEHHRVASSEEIPK 826
            +  +P    G+G+ +  HE + SREDG+ ++ TDSPARH   G  +   H V S++   K
Sbjct: 63   HSEDPS---GKGSVRTTHELQKSREDGDPKQFTDSPARHGG-GDSSHRGHGVGSADN-RK 117

Query: 825  RSGRQSGGHDRSIERSPLHQHYQTRTXXXXXXXXXXSWERKSS-EGSHGLAPNTPGRSRL 649
            R  RQS G + +I+RSPLH+  +T            SWE K+S + SHG    TPGRSRL
Sbjct: 118  RPSRQSTGPEHNIDRSPLHRQAKT------PGRDSPSWEGKNSYDSSHG----TPGRSRL 167

Query: 648  RPGARGDETPDRGAAVPKFGEWDENNPASADGFTHIFNKMREEKLTGSGNSATVPDEQQP 469
            RP  RGDETPD GAAVPKFGEWDE+NPASADG+THIFNK+REEK  G+G+    P+ +Q 
Sbjct: 168  RPSYRGDETPDEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPGTPNGRQ- 226

Query: 468  YSGGHKPDNSNSTGCFCFPWGKR 400
            Y+  ++  N  +  C CF WGK+
Sbjct: 227  YAARNQRANDKAQSC-CFCWGKK 248


>gb|ACJ70052.1| RIN4-like protein [Malus x domestica]
          Length = 239

 Score =  219 bits (558), Expect = 1e-54
 Identities = 127/265 (47%), Positives = 161/265 (60%), Gaps = 3/265 (1%)
 Frame = -1

Query: 1185 QHSRVPKFGNWENEQDVPYTQYFDKARKGKNA--GKMINPNDPQDSLDVDAGTRPIQAPP 1012
            Q S VPKFGNWE+++ VPYT YFDKARKG+    GKMINPNDP+++ D+ + T     P 
Sbjct: 3    QRSHVPKFGNWEDQESVPYTAYFDKARKGRTGVGGKMINPNDPEENPDILSDTSASSPPK 62

Query: 1011 FRNGVEPDLQVGEGAQKPKHERRISREDGEFRRLTDSPARHDALGRKTSEHHRVASSEEI 832
             R   EP         KP HERR SRED + R   +SPA+  + G       R  SS E 
Sbjct: 63   VRP--EPG--------KPVHERRRSREDNDLR-FANSPAQRRSSGEHQPNRGRGVSSGET 111

Query: 831  PKRSGRQSGGHDRSIERSPLHQHYQTRTXXXXXXXXXXSWERKSS-EGSHGLAPNTPGRS 655
             +R+ R S G + S+ERSPLH++ +             SWE K+S E SHG    TP RS
Sbjct: 112  HRRAARPSAGSENSVERSPLHRNARVS------GRDSPSWEGKASYESSHG----TPARS 161

Query: 654  RLRPGARGDETPDRGAAVPKFGEWDENNPASADGFTHIFNKMREEKLTGSGNSATVPDEQ 475
            RL+P    DE+P++GAAVPKFGEWDEN+PASADGFTHIFNK+REEK   +G +   P   
Sbjct: 162  RLKPR---DESPEKGAAVPKFGEWDENDPASADGFTHIFNKVREEK---AGKAPGTPSHP 215

Query: 474  QPYSGGHKPDNSNSTGCFCFPWGKR 400
              Y    K  +++S  C CFPWG++
Sbjct: 216  S-YQDARKQGSNDSAKCCCFPWGRK 239