BLASTX nr result

ID: Coptis25_contig00008111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008111
         (2470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vini...   195   2e-93
emb|CBI20629.3| unnamed protein product [Vitis vinifera]              279   2e-92
ref|XP_003589026.1| BEL1-like homeodomain protein [Medicago trun...   268   5e-69
ref|XP_003525994.1| PREDICTED: homeobox protein ATH1-like [Glyci...   260   1e-66
ref|NP_001242392.1| uncharacterized protein LOC100820354 [Glycin...   258   5e-66

>ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vinifera]
          Length = 514

 Score =  195 bits (496), Expect(2) = 2e-93
 Identities = 140/402 (34%), Positives = 204/402 (50%), Gaps = 38/402 (9%)
 Frame = -2

Query: 1854 MDNYMFNGSLDMAER--IGIDGMFLHMYSGPIVQPDSHDVNSRNQPMSGIPFLSTFHGEP 1681
            M+N MFN  +D+A R  + +DG+  HM +  ++Q D   +NS+NQ M G+P L    GE 
Sbjct: 1    MENDMFNVPMDIAGRNHVVMDGVSSHMSTNSLIQSDLFHLNSQNQFMIGLPVLPMLQGET 60

Query: 1680 TN----DLEIENVDGVVDAEISFSRNRPLSRQGVGEASASSSTSIGNCNFQEHYTRGASL 1513
             N    D ++ +   +VD++   SRN          +S   +  IG+ N QE +    ++
Sbjct: 61   INGLHADFQMTSRPAIVDSDELVSRN----------SSLGQACPIGSTNGQEQFNEVTTI 110

Query: 1512 SATAIAHLLAANTDLQGNFSGVNLSTASGF---------------ASTSSVEPPVNCGY- 1381
            SA+++A LLA  + L  N   + +S  S F                S SS+   V+C Y 
Sbjct: 111  SASSLATLLATKSGLHENLDNLAISATSVFPSEDLRTFVSSDCSNTSNSSLATSVDCPYD 170

Query: 1380 GLPSEMEILGSKKDGKWGFDGFLGPQELTGSPPIRTVCPPFHFIGSSSQHELTASNKSPS 1201
            G+ S+M         KWGFD FL   ELTG   +RT   PFH IG    +   +S+    
Sbjct: 171  GVLSDMT-------RKWGFDKFLPSPELTGKTTLRTGFQPFHIIGDMDPNGWISSSADTR 223

Query: 1200 INHTYGYYIPNSELSLSLATYQPSGNV-PTIPDQSSEMSCSVVTDHSLREAGFGSERSSD 1024
                YG    ++ELSLSLAT QPS     T P+Q SE SCS VT   L E G GSE+ S 
Sbjct: 224  TVPPYG---SSNELSLSLATSQPSVMCGATAPNQCSERSCSGVTHPCLNEVGLGSEQGSC 280

Query: 1023 NRNSLSMNFSHFRPVHFSHLPSGSKYLHVVQQILAEVASYSIRNIDY------QGGFLES 862
            N   LS++F  +RP  FS + SGS+YLHV+Q+ILAE+ +YS+ N+D+      + G   +
Sbjct: 281  NSKELSLSFGSYRPAQFSQVISGSRYLHVIQEILAEILNYSLENLDHSIYSTTRTGGQAN 340

Query: 861  TSYSSNWPGER---TSDYDDYPCSSTR------PISRRQNVE 763
               SS +  +R       D++P    R      P+ +++ VE
Sbjct: 341  VQLSSGYAAQRGLSVMGSDEFPDEDGRYAVPMDPVLQKREVE 382



 Score =  176 bits (447), Expect(2) = 2e-93
 Identities = 86/126 (68%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
 Frame = -1

Query: 661 LNLLQAVDSRYDQCLDEIHRVVSAFNDATELDPQTHTRFALNTVSLLYKSLRERIAMQIM 482
           L LLQ VD +Y+QCLDEIH V+SAF+ ATELDPQ H RFAL+T+SLLYK+LRERI+ QI+
Sbjct: 389 LALLQVVDDQYNQCLDEIHTVISAFHAATELDPQIHARFALHTISLLYKNLRERISNQIL 448

Query: 481 TIGESLNNQCREER---PFEASFIQRQWALQEL-RKDHPSWRPQRGLPEKAVSVLREWMF 314
            +G    N C  E+   PFE+SFIQ+QW LQ+L RKDH  WRPQRGLPE++VSVLR WMF
Sbjct: 449 AMGTRFTNGCTSEKERPPFESSFIQKQWDLQQLRRKDHQLWRPQRGLPERSVSVLRAWMF 508

Query: 313 QNFLHP 296
           QNFLHP
Sbjct: 509 QNFLHP 514


>emb|CBI20629.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  279 bits (714), Expect(2) = 2e-92
 Identities = 133/200 (66%), Positives = 167/200 (83%), Gaps = 4/200 (2%)
 Frame = -1

Query: 661 LNLLQAVDSRYDQCLDEIHRVVSAFNDATELDPQTHTRFALNTVSLLYKSLRERIAMQIM 482
           L LLQ VD +Y+QCLDEIH V+SAF+ ATELDPQ H RFAL+T+SLLYK+LRERI+ QI+
Sbjct: 144 LALLQVVDDQYNQCLDEIHTVISAFHAATELDPQIHARFALHTISLLYKNLRERISNQIL 203

Query: 481 TIGESLNNQCREER---PFEASFIQRQWALQELR-KDHPSWRPQRGLPEKAVSVLREWMF 314
            +G    N C  E+   PFE+SFIQ+QW LQ+LR KDH  WRPQRGLPE++VSVLR WMF
Sbjct: 204 AMGTRFTNGCTSEKERPPFESSFIQKQWDLQQLRRKDHQLWRPQRGLPERSVSVLRAWMF 263

Query: 313 QNFLHPYPKDAEKHVLAVRSGLTRSQVSNWFINARVRIWKPLIEDMYAEMNHKKSRQDEN 134
           QNFLHPYPKDAEKH+LAV+SGLTRSQVSNWFINARVR+WKP+IE+MY+EMN +K R+++ 
Sbjct: 264 QNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYSEMNRRKGRRNDE 323

Query: 133 VTGSSDCRSHISINEQSFRL 74
            + +S+ RS IS++ Q +++
Sbjct: 324 ESNNSNRRSTISMDNQRYKI 343



 Score = 89.0 bits (219), Expect(2) = 2e-92
 Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
 Frame = -2

Query: 1116 TIPDQSSEMSCSVVTDHSLREAGFGSERSSDNRNSLSMNFSHFRPVHFSHLPSGSKYLHV 937
            T P+Q SE SCS VT   L E G GSE+ S N   LS++F  +RP  FS + SGS+YLHV
Sbjct: 5    TAPNQCSERSCSGVTHPCLNEVGLGSEQGSCNSKELSLSFGSYRPAQFSQVISGSRYLHV 64

Query: 936  VQQILAEVASYSIRNIDY------QGGFLESTSYSSNWPGER---TSDYDDYPCSSTR-- 790
            +Q+ILAE+ +YS+ N+D+      + G   +   SS +  +R       D++P    R  
Sbjct: 65   IQEILAEILNYSLENLDHSIYSTTRTGGQANVQLSSGYAAQRGLSVMGSDEFPDEDGRYA 124

Query: 789  ----PISRRQNVE 763
                P+ +++ VE
Sbjct: 125  VPMDPVLQKREVE 137


>ref|XP_003589026.1| BEL1-like homeodomain protein [Medicago truncatula]
           gi|355478074|gb|AES59277.1| BEL1-like homeodomain
           protein [Medicago truncatula]
          Length = 524

 Score =  268 bits (685), Expect = 5e-69
 Identities = 133/200 (66%), Positives = 160/200 (80%), Gaps = 3/200 (1%)
 Frame = -1

Query: 661 LNLLQAVDSRYDQCLDEIHRVVSAFNDATELDPQTHTRFALNTVSLLYKSLRERIAMQIM 482
           L LLQ VDS+Y QCLDEIH VVSAF+ ATELDPQ H  FA+ TVS LYK LRERI+  I+
Sbjct: 326 LMLLQMVDSQYSQCLDEIHTVVSAFHAATELDPQIHAHFAVKTVSRLYKDLRERISKHIL 385

Query: 481 TIGESLNNQCREERP---FEASFIQRQWALQELRKDHPSWRPQRGLPEKAVSVLREWMFQ 311
           ++G + N+   EE      E SFIQ+QWALQ+L++    WRPQRGLPE++VSVLR+WMFQ
Sbjct: 386 SMGSNFNSSWSEEDKELSVETSFIQKQWALQQLKRKDQLWRPQRGLPERSVSVLRDWMFQ 445

Query: 310 NFLHPYPKDAEKHVLAVRSGLTRSQVSNWFINARVRIWKPLIEDMYAEMNHKKSRQDENV 131
           NFLHPYPKDAEKH+LA++SGLTRSQVSNWFINARVR+WKPLIE+MYAEMN +K+ ++E  
Sbjct: 446 NFLHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVRLWKPLIEEMYAEMNRRKACRNEGE 505

Query: 130 TGSSDCRSHISINEQSFRLN 71
             SS+ RS ISIN Q F +N
Sbjct: 506 NESSE-RSRISINNQMFDMN 524



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 94/359 (26%), Positives = 154/359 (42%), Gaps = 7/359 (1%)
 Frame = -2

Query: 1854 MDNYMFNGSLDMAERIGIDGMFLHMYSGPIVQPDSHDVNSRNQPMSGIPFLSTFHGEPTN 1675
            M+N ++   ++M +      +  H+   P++   S D+N++N  ++GIP LS   GE   
Sbjct: 1    MENDVYTAQMNMED------ITQHLTQKPLIHYYSFDLNNQNNIINGIPILSG--GEQDQ 52

Query: 1674 DLEIENVDGVVDAEISFSRNRPLSRQGVGEASASSSTSIGNCNFQEHYTRGASLSATAIA 1495
             ++   ++ V  A+ SF      S+QG       S+  + N +F                
Sbjct: 53   HVDGSFMNQVTIADNSFVT----SQQGRTIVENPSNLIVNNNDFS--------------- 93

Query: 1494 HLLAANTDLQGNFSGVNLSTASGFASTSSVEPPVNCGYGLPSEMEILGSKKDGKWGFDGF 1315
              + A   LQ N   +     + +  TS+  P             +  +  D     + F
Sbjct: 94   --VPARIGLQENLEAIVPYIFNNWHDTSNSNP-------------LCATFGDNNSYVNKF 138

Query: 1314 LGPQELTGSPPIRTVCPPFHFIGSSSQHELTASNKSPSINHTYGYYIPNSELSLSLATYQ 1135
            L  QE        +  P    IG+   +   +SN +   N  Y     ++ELSLSLAT  
Sbjct: 139  LKAQESNVGTEFMSYSP----IGNIDPNGWQSSNVANLTNLAYSSSNCSNELSLSLATSP 194

Query: 1134 PSGNVPTIPDQSSEMSCSVVTDHSLREAGFGSERSSDNRNSLSMNFSHFRPVHFSHLPSG 955
             S        Q SE+SCS +T HS+     G E++S +   LSM+  + + V FS    G
Sbjct: 195  TSV-------QCSEISCSDLT-HSMNGTRSGLEQASCSSMELSMSLGNDKHVKFSPAILG 246

Query: 954  SKYLHVVQQILAEVASYSIRNID---YQGGFLE---STSYSSNWPGERTS-DYDDYPCS 799
            S+YL V+Q+IL ++A++S  N+D   Y G  +    + S SSN    R   + D+ P S
Sbjct: 247  SRYLAVIQEILVQIATFSFENLDEINYSGSGVRGRGNKSTSSNTTKRRIGINRDESPMS 305


>ref|XP_003525994.1| PREDICTED: homeobox protein ATH1-like [Glycine max]
          Length = 355

 Score =  260 bits (664), Expect = 1e-66
 Identities = 122/177 (68%), Positives = 147/177 (83%), Gaps = 2/177 (1%)
 Frame = -1

Query: 661 LNLLQAVDSRYDQCLDEIHRVVSAFNDATELDPQTHTRFALNTVSLLYKSLRERIAMQIM 482
           L LLQ VD+RY QCLDEIH VVSAF  ATELDPQ H  FAL T+S+LY+ LRERI+  I+
Sbjct: 156 LTLLQLVDNRYSQCLDEIHTVVSAFQAATELDPQIHAHFALQTISILYRDLRERISNYIL 215

Query: 481 TIGESLNNQCREERPF--EASFIQRQWALQELRKDHPSWRPQRGLPEKAVSVLREWMFQN 308
            +G + NN C EE  +  E SF+Q+QWALQ+L++    WRPQRGLPE++VSVLR WMFQN
Sbjct: 216 AMGSNFNNSCSEENEWSVETSFLQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQN 275

Query: 307 FLHPYPKDAEKHVLAVRSGLTRSQVSNWFINARVRIWKPLIEDMYAEMNHKKSRQDE 137
           FLHPYPKDAEKH+LAV+SGLTRSQVSNWFINARVR+WKP+IE+MYAEMN +K+ ++E
Sbjct: 276 FLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKACRNE 332


>ref|NP_001242392.1| uncharacterized protein LOC100820354 [Glycine max]
           gi|255637081|gb|ACU18872.1| unknown [Glycine max]
          Length = 355

 Score =  258 bits (659), Expect = 5e-66
 Identities = 127/197 (64%), Positives = 156/197 (79%), Gaps = 3/197 (1%)
 Frame = -1

Query: 661 LNLLQAVDSRYDQCLDEIHRVVSAFNDATELDPQTHTRFALNTVSLLYKSLRERIAMQIM 482
           L LLQ  D+RY+QCLDEIH VVSAF+ ATELDPQ H  FAL T+S+LYK LRERI+  I+
Sbjct: 156 LALLQLADNRYNQCLDEIHTVVSAFHAATELDPQIHAHFALQTISILYKDLRERISNYIL 215

Query: 481 TIGESLNNQCREERPF--EASFIQRQWALQELRKDHPSWRPQRGLPEKAVSVLREWMFQN 308
            +G + NN C EE  +  E SF+Q+QWALQ+L +    WRPQRGLPE++V VLR WMFQN
Sbjct: 216 AMGSNFNNSCSEENEWSAETSFLQKQWALQQLNRKDQLWRPQRGLPERSVWVLRAWMFQN 275

Query: 307 FLHPYPKDAEKHVLAVRSGLTRSQVSNWFINARVRIWKPLIEDMYAEMNHKKS-RQDENV 131
           FLHPYPKDAEKH+LAV+SGLTRSQVSNWFINARVR+WKP+IE+MYAEMN +K+ R +E +
Sbjct: 276 FLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKACRNEEGM 335

Query: 130 TGSSDCRSHISINEQSF 80
              S+  + IS++ Q F
Sbjct: 336 --QSNHGNRISMSNQRF 350


Top