BLASTX nr result

ID: Coptis25_contig00008109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008109
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263...    67   1e-09
emb|CBI23350.3| unnamed protein product [Vitis vinifera]               67   1e-09
gb|AEY85029.1| cohesin subunit [Camellia sinensis]                     66   3e-09
ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263480 [Vitis vinifera]
          Length = 1335

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +3

Query: 3    RMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 119
            RMFFETLVLKTRDYI VEQE  FD I++KPRVKL+KSDF
Sbjct: 1297 RMFFETLVLKTRDYIQVEQEKPFDNINVKPRVKLMKSDF 1335


>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +3

Query: 3    RMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 119
            RMFFETLVLKTRDYI VEQE  FD I++KPRVKL+KSDF
Sbjct: 1095 RMFFETLVLKTRDYIQVEQEKPFDNINVKPRVKLMKSDF 1133


>gb|AEY85029.1| cohesin subunit [Camellia sinensis]
          Length = 1336

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +3

Query: 3    RMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 119
            RMFFE LVLKTRDYIHVEQ  +FD I+IKPRVKL+KSDF
Sbjct: 1298 RMFFEALVLKTRDYIHVEQGASFDDINIKPRVKLMKSDF 1336


>ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|222864152|gb|EEF01283.1|
            predicted protein [Populus trichocarpa]
          Length = 1065

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 3    RMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 119
            RMFFETLVLKTRDYIHVEQ   FD I++KPR KL+KSDF
Sbjct: 1027 RMFFETLVLKTRDYIHVEQLKPFDSINVKPRAKLMKSDF 1065


>ref|XP_002312205.1| predicted protein [Populus trichocarpa] gi|222852025|gb|EEE89572.1|
            predicted protein [Populus trichocarpa]
          Length = 1208

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 3    RMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 119
            RMFFETLVLKTRDYIHV+Q   FD IS+KPR KL+KSDF
Sbjct: 1170 RMFFETLVLKTRDYIHVDQLKPFDSISVKPRAKLMKSDF 1208


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