BLASTX nr result

ID: Coptis25_contig00008104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008104
         (1937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   105   6e-20
emb|CBI39750.3| unnamed protein product [Vitis vinifera]              105   6e-20
ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus c...   102   3e-19
ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-16
emb|CBI16839.3| unnamed protein product [Vitis vinifera]               94   2e-16

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  105 bits (261), Expect = 6e-20
 Identities = 43/86 (50%), Positives = 65/86 (75%)
 Frame = +2

Query: 2   LEMSVFVETSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYY 181
           +E+ VF +T++ TH+ + VSP++T+GD  R+L   H+ CFP +GEI + GLMV+++S +Y
Sbjct: 5   VEVPVFTDTNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFY 64

Query: 182 RLPDSVVLKDAFQGFKGTWFLHVDVT 259
            LP+SV +K AFQG KGTWFLH + +
Sbjct: 65  HLPESVPIKHAFQGLKGTWFLHTEAS 90


>emb|CBI39750.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  105 bits (261), Expect = 6e-20
 Identities = 43/86 (50%), Positives = 65/86 (75%)
 Frame = +2

Query: 2   LEMSVFVETSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYY 181
           +E+ VF +T++ TH+ + VSP++T+GD  R+L   H+ CFP +GEI + GLMV+++S +Y
Sbjct: 5   VEVPVFTDTNMGTHVALSVSPNITSGDFMRELEKTHFNCFPELGEIRVYGLMVRRKSCFY 64

Query: 182 RLPDSVVLKDAFQGFKGTWFLHVDVT 259
            LP+SV +K AFQG KGTWFLH + +
Sbjct: 65  HLPESVPIKHAFQGLKGTWFLHTEAS 90


>ref|XP_002516324.1| hypothetical protein RCOM_1189860 [Ricinus communis]
           gi|223544554|gb|EEF46071.1| hypothetical protein
           RCOM_1189860 [Ricinus communis]
          Length = 364

 Score =  102 bits (255), Expect = 3e-19
 Identities = 48/92 (52%), Positives = 66/92 (71%)
 Frame = +2

Query: 5   EMSVFVETSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYYR 184
           E+ VF++T++ THI   VSP +TA D KR+L  EH   FP++GEI  + LMV+++S +Y 
Sbjct: 6   EVLVFIDTNIGTHIAASVSPDITAADFKRELEREHLSFFPTLGEIKAHVLMVRRKSCFYH 65

Query: 185 LPDSVVLKDAFQGFKGTWFLHVDVTPSNQYDK 280
           L +S+ +K AFQG KGTWFLHV V PS+  DK
Sbjct: 66  LTESLPIKYAFQGLKGTWFLHVKVQPSSNVDK 97


>ref|XP_002309929.1| predicted protein [Populus trichocarpa] gi|222852832|gb|EEE90379.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 42/91 (46%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
 Frame = +2

Query: 5   EMSVFVETSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGL-MVKKRSHYY 181
           E++VF +T++ THI MG+SP +T  D KR+L   H+ CFP +GEI +  L  V++ + +Y
Sbjct: 9   EVAVFTDTNMDTHIAMGISPDITVADFKRELEKMHFNCFPKLGEIKVCELKQVRRNNCFY 68

Query: 182 RLPDSVVLKDAFQGFKGTWFLHVDVTPSNQY 274
            L +S+ +K AFQG KG WFLHV++  SN +
Sbjct: 69  HLLESLPIKYAFQGLKGNWFLHVEIRSSNSF 99


>emb|CBI16839.3| unnamed protein product [Vitis vinifera]
          Length = 1309

 Score = 93.6 bits (231), Expect = 2e-16
 Identities = 46/110 (41%), Positives = 66/110 (60%)
 Frame = +2

Query: 11  SVFVETSLSTHIVMGVSPHMTAGDLKRQLGSEHYICFPSIGEIIINGLMVKKRSHYYRLP 190
           +VF++TSL THI M VS   T  DLK+++  EH +CF SIG+I I+ L VK++  +Y L 
Sbjct: 17  TVFIDTSLDTHIAMIVSDVDTVADLKKKILLEHPLCFSSIGKIKIHALKVKRKGFFYHLS 76

Query: 191 DSVVLKDAFQGFKGTWFLHVDVTPSNQYDKTACVSRDTQGGESTCQPTIE 340
           DS+ ++ AF G K TWFLHVD + S +  +         G    C P+ +
Sbjct: 77  DSMFVRSAFDGVKRTWFLHVDASSSVEQSENQLACNPDSGNLLLCLPSAD 126


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