BLASTX nr result

ID: Coptis25_contig00008088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008088
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317480.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151
gb|AFK42428.1| unknown [Medicago truncatula]                          530   e-148
gb|AFK44774.1| unknown [Lotus japonicus]                              526   e-147
gb|ACJ84969.1| unknown [Medicago truncatula]                          525   e-146
ref|XP_003634673.1| PREDICTED: branched-chain-amino-acid aminotr...   519   e-145

>ref|XP_002317480.1| predicted protein [Populus trichocarpa] gi|222860545|gb|EEE98092.1|
            predicted protein [Populus trichocarpa]
          Length = 338

 Score =  540 bits (1391), Expect = e-151
 Identities = 269/336 (80%), Positives = 304/336 (90%), Gaps = 5/336 (1%)
 Frame = -3

Query: 1259 IAEMEVDSESVT----IYSSTELLGKLQDKWNG-KKKPYPAMYSSVYGGIILDPEMMVIP 1095
            +A +EV+S S T      SS+ELL  L +KW   KK+PYPAMYSSVYGGIILDP MMVIP
Sbjct: 1    MASLEVESGSGTKVHVFSSSSELLESLHEKWGSVKKQPYPAMYSSVYGGIILDPAMMVIP 60

Query: 1094 VDDHMVHRGHGVFDTAMLLNGHLYELDTHLNRFLRSASKARISSPFPQSTLRSILIQLTA 915
            +DDHMVHRGHGVFDTA++L+GHLYELD HL+RFLRSASKARI+SPFP STLRSILIQL A
Sbjct: 61   IDDHMVHRGHGVFDTAIILDGHLYELDVHLDRFLRSASKARIASPFPCSTLRSILIQLAA 120

Query: 914  ASQCKKGSLRYWLSAGPGDFLLSPAGCPVSAFYAVVIEDDYSQRKEGVKVITSTIPMKIP 735
            AS+CKKG+LRYWLSAGPG+FLLSPAGCP SAFYAVVI++D+SQRKEGVKVITSTIPMK P
Sbjct: 121  ASKCKKGTLRYWLSAGPGNFLLSPAGCPTSAFYAVVIDEDFSQRKEGVKVITSTIPMKSP 180

Query: 734  LFATMKNVNYLPNVLAVMEAEEKGAFASIWIDDEGYIAEGPNVNVAFISKEKELLLPLFD 555
            +FATMKNVNYLPNVL+VMEAE++GAFASIWID+EGYIAEGPNVNVAFIS++KEL+LP+FD
Sbjct: 181  MFATMKNVNYLPNVLSVMEAEDQGAFASIWIDEEGYIAEGPNVNVAFISQDKELILPIFD 240

Query: 554  KILAGCTAKRLLQLAPKLVEQGLLKSVSTSNLTVEQAKDSVEMMYVGSGLPILPIIMWDD 375
            KIL+G TA RLLQLAPKL+EQG LKSV T NLTVE+AK + EMMYVGS LPILPI+MWD+
Sbjct: 241  KILSGRTALRLLQLAPKLIEQGRLKSVKTGNLTVEEAKGAAEMMYVGSTLPILPIVMWDE 300

Query: 374  QPIGEGKVGELTIALSDLLWDDMVAGPDTQRISVPY 267
            QPIG+GKVGELT+ALSDLLWDDMVAGP T RI VPY
Sbjct: 301  QPIGDGKVGELTMALSDLLWDDMVAGPATLRIPVPY 336


>gb|AFK42428.1| unknown [Medicago truncatula]
          Length = 344

 Score =  530 bits (1364), Expect = e-148
 Identities = 260/334 (77%), Positives = 302/334 (90%), Gaps = 3/334 (0%)
 Frame = -3

Query: 1256 AEMEVDSE-SVTIYSST-ELLGKLQDKWNG-KKKPYPAMYSSVYGGIILDPEMMVIPVDD 1086
            +E+E+D +  V ++SS+ ELL KL   W+  +K+PYPAMYSSVYGGIILDP MMVIP+DD
Sbjct: 11   SEIEIDGDFKVHVFSSSSELLEKLHQTWSSVEKQPYPAMYSSVYGGIILDPAMMVIPIDD 70

Query: 1085 HMVHRGHGVFDTAMLLNGHLYELDTHLNRFLRSASKARISSPFPQSTLRSILIQLTAASQ 906
            HMVHRGHGVFDTA++  GHLYELD HL+RFLRSASKA+ISSPFP+STLRSILIQLTAAS+
Sbjct: 71   HMVHRGHGVFDTAIIFEGHLYELDVHLDRFLRSASKAKISSPFPRSTLRSILIQLTAASK 130

Query: 905  CKKGSLRYWLSAGPGDFLLSPAGCPVSAFYAVVIEDDYSQRKEGVKVITSTIPMKIPLFA 726
             KKG+LRYWLSAGPGDFLLS +GCP  AFYAVVI+ D+SQ KEGVKVITS++PMK PLFA
Sbjct: 131  LKKGTLRYWLSAGPGDFLLSSSGCPTPAFYAVVIDHDFSQCKEGVKVITSSVPMKAPLFA 190

Query: 725  TMKNVNYLPNVLAVMEAEEKGAFASIWIDDEGYIAEGPNVNVAFISKEKELLLPLFDKIL 546
            TMKNVNYLPNVL+V+EAEEKGAF SIWID+ GYIAEGPNVNVAFI++EKEL++P FD IL
Sbjct: 191  TMKNVNYLPNVLSVLEAEEKGAFGSIWIDEVGYIAEGPNVNVAFITQEKELVMPFFDNIL 250

Query: 545  AGCTAKRLLQLAPKLVEQGLLKSVSTSNLTVEQAKDSVEMMYVGSGLPILPIIMWDDQPI 366
             GCTAKRLL+LAPKLV+QG+LKSV+T N+TV++A+ +VEMMYVGS LP+LPIIMWDDQPI
Sbjct: 251  YGCTAKRLLELAPKLVDQGVLKSVTTKNMTVDEARGAVEMMYVGSTLPVLPIIMWDDQPI 310

Query: 365  GEGKVGELTIALSDLLWDDMVAGPDTQRISVPYV 264
            G+GKVGELT+ LSDLLWDDMVAGPDTQRI VPYV
Sbjct: 311  GDGKVGELTMLLSDLLWDDMVAGPDTQRILVPYV 344


>gb|AFK44774.1| unknown [Lotus japonicus]
          Length = 348

 Score =  526 bits (1355), Expect = e-147
 Identities = 255/341 (74%), Positives = 301/341 (88%), Gaps = 1/341 (0%)
 Frame = -3

Query: 1283 SSSIRRDFIAEMEVDSESVTIYSSTELLGKLQDKWNGKKK-PYPAMYSSVYGGIILDPEM 1107
            S+S ++    E + D       SS+ELL KL ++W+  +K PYPAMYSS+YGGIILDP M
Sbjct: 8    SASSKKSTEVENDADFRVHVFSSSSELLEKLHERWSSVEKLPYPAMYSSIYGGIILDPAM 67

Query: 1106 MVIPVDDHMVHRGHGVFDTAMLLNGHLYELDTHLNRFLRSASKARISSPFPQSTLRSILI 927
            MVIP+DDHMVHRGHGVFDTA++LNG+LYELD HL+RFLRSASKA+ISSPF +STLRSILI
Sbjct: 68   MVIPIDDHMVHRGHGVFDTAIILNGYLYELDVHLDRFLRSASKAKISSPFSKSTLRSILI 127

Query: 926  QLTAASQCKKGSLRYWLSAGPGDFLLSPAGCPVSAFYAVVIEDDYSQRKEGVKVITSTIP 747
            QLTAAS+CKKG+LRYWLSAGPGDFLLS +GCP SAFYAVVI+ ++SQ KEGVK +TS++P
Sbjct: 128  QLTAASKCKKGTLRYWLSAGPGDFLLSSSGCPTSAFYAVVIDQEFSQCKEGVKAVTSSVP 187

Query: 746  MKIPLFATMKNVNYLPNVLAVMEAEEKGAFASIWIDDEGYIAEGPNVNVAFISKEKELLL 567
            MK PLFATMKNVNYLPNVL++MEAEEKGAFA+IW+D+ GYIAEGP+VNVAFI++EKEL++
Sbjct: 188  MKPPLFATMKNVNYLPNVLSIMEAEEKGAFAAIWVDEAGYIAEGPHVNVAFITQEKELII 247

Query: 566  PLFDKILAGCTAKRLLQLAPKLVEQGLLKSVSTSNLTVEQAKDSVEMMYVGSGLPILPII 387
            P FD IL GCTAKRLL+LAPKLV+QGLLK V+  NLTVE+AK S EMM+VGS LP+LPII
Sbjct: 248  PSFDNILRGCTAKRLLELAPKLVDQGLLKGVTNKNLTVEEAKASAEMMFVGSTLPVLPII 307

Query: 386  MWDDQPIGEGKVGELTIALSDLLWDDMVAGPDTQRISVPYV 264
             WDDQPIG+G+VGELT+ LSDLLWDDMVAGPDTQRI+VPYV
Sbjct: 308  AWDDQPIGDGRVGELTMKLSDLLWDDMVAGPDTQRIAVPYV 348


>gb|ACJ84969.1| unknown [Medicago truncatula]
          Length = 343

 Score =  525 bits (1353), Expect = e-146
 Identities = 261/334 (78%), Positives = 301/334 (90%), Gaps = 3/334 (0%)
 Frame = -3

Query: 1256 AEMEVDSE-SVTIYSST-ELLGKLQDKWNG-KKKPYPAMYSSVYGGIILDPEMMVIPVDD 1086
            +E+E+D +  V ++SS+ ELL KL   W+  +K+PYPAMYSSVYGGIILDP MMVIP+DD
Sbjct: 11   SEIEIDGDFKVHVFSSSSELLEKLHQTWSSVEKQPYPAMYSSVYGGIILDPAMMVIPIDD 70

Query: 1085 HMVHRGHGVFDTAMLLNGHLYELDTHLNRFLRSASKARISSPFPQSTLRSILIQLTAASQ 906
            HMVHRGHGVFDTA++  GHLYELD HL+RFLRSASKA+ISSPFP+STLRSILIQLTAAS+
Sbjct: 71   HMVHRGHGVFDTAIIFEGHLYELDVHLDRFLRSASKAKISSPFPRSTLRSILIQLTAASK 130

Query: 905  CKKGSLRYWLSAGPGDFLLSPAGCPVSAFYAVVIEDDYSQRKEGVKVITSTIPMKIPLFA 726
             KKG+LRYWLSAGPGDFLLS +GCP  AFYAVVI+ D+SQ KEGVKVITS++PMK PLFA
Sbjct: 131  LKKGTLRYWLSAGPGDFLLSSSGCPTPAFYAVVIDHDFSQCKEGVKVITSSVPMKAPLFA 190

Query: 725  TMKNVNYLPNVLAVMEAEEKGAFASIWIDDEGYIAEGPNVNVAFISKEKELLLPLFDKIL 546
            TMKNVNYLPNVL+V+EAEEKGAF SIWID+ GYIAEGPNVNVAFI++EKEL++P FD IL
Sbjct: 191  TMKNVNYLPNVLSVLEAEEKGAFGSIWIDEVGYIAEGPNVNVAFITQEKELVMPFFDNIL 250

Query: 545  AGCTAKRLLQLAPKLVEQGLLKSVSTSNLTVEQAKDSVEMMYVGSGLPILPIIMWDDQPI 366
             GCTAKRLL+LAPKLV+QG+LKSV+T N+TVE A+ +VEMMYVGS LP+LPIIMWDDQPI
Sbjct: 251  YGCTAKRLLELAPKLVDQGVLKSVTTKNMTVE-ARGAVEMMYVGSTLPVLPIIMWDDQPI 309

Query: 365  GEGKVGELTIALSDLLWDDMVAGPDTQRISVPYV 264
            G+GKVGELT+ LSDLLWDDMVAGPDTQRI VPYV
Sbjct: 310  GDGKVGELTMLLSDLLWDDMVAGPDTQRILVPYV 343


>ref|XP_003634673.1| PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3,
            chloroplastic-like [Vitis vinifera]
            gi|302142961|emb|CBI20256.3| unnamed protein product
            [Vitis vinifera]
          Length = 351

 Score =  519 bits (1337), Expect = e-145
 Identities = 254/333 (76%), Positives = 302/333 (90%), Gaps = 3/333 (0%)
 Frame = -3

Query: 1256 AEMEVDSE-SVTIYSST-ELLGKLQDKWN-GKKKPYPAMYSSVYGGIILDPEMMVIPVDD 1086
            AE+E D+E  V ++SS+ EL+ KL +KW+ GK+KPYPAMYSSV+GGIILDP MMVIP+DD
Sbjct: 18   AEVERDTEFRVHVFSSSSELVEKLHEKWDSGKEKPYPAMYSSVFGGIILDPAMMVIPIDD 77

Query: 1085 HMVHRGHGVFDTAMLLNGHLYELDTHLNRFLRSASKARISSPFPQSTLRSILIQLTAASQ 906
            HMVHRGHGVFDT+++LNG+LYELD HL+RFLRSA+KA+ISSPFP+STLRSIL+QLTAAS+
Sbjct: 78   HMVHRGHGVFDTSIILNGYLYELDAHLDRFLRSAAKAKISSPFPRSTLRSILVQLTAASR 137

Query: 905  CKKGSLRYWLSAGPGDFLLSPAGCPVSAFYAVVIEDDYSQRKEGVKVITSTIPMKIPLFA 726
            C +G+LR+WL++GPG+FLLSP+GCP SAFYAVVI+D   Q +EGVKVITSTIPMK PLFA
Sbjct: 138  CTEGTLRFWLTSGPGNFLLSPSGCPTSAFYAVVIKDKIYQHREGVKVITSTIPMKSPLFA 197

Query: 725  TMKNVNYLPNVLAVMEAEEKGAFASIWIDDEGYIAEGPNVNVAFISKEKELLLPLFDKIL 546
            T KNVNYLPNVL+VMEAEEKGAFASIW+D+EGYIAEGPNVNVAFI+ +KEL+LP FDKIL
Sbjct: 198  TTKNVNYLPNVLSVMEAEEKGAFASIWVDEEGYIAEGPNVNVAFITHDKELILPFFDKIL 257

Query: 545  AGCTAKRLLQLAPKLVEQGLLKSVSTSNLTVEQAKDSVEMMYVGSGLPILPIIMWDDQPI 366
            +GCTAKRLL+LAPKLVEQG LK V T+N+TVE+AK S EMMYVGS LP+LPI+MWD++PI
Sbjct: 258  SGCTAKRLLELAPKLVEQGRLKDVRTANVTVEEAKGSAEMMYVGSTLPLLPIVMWDEKPI 317

Query: 365  GEGKVGELTIALSDLLWDDMVAGPDTQRISVPY 267
            G+G VGELT+ALSDLLWDDMVAGP T R+ V Y
Sbjct: 318  GDGLVGELTMALSDLLWDDMVAGPKTHRLLVTY 350


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