BLASTX nr result

ID: Coptis25_contig00008085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008085
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307980.1| predicted protein [Populus trichocarpa] gi|2...    67   9e-09
ref|XP_002323241.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-06
gb|EEE54342.1| hypothetical protein OsJ_01321 [Oryza sativa Japo...    60   2e-06
gb|EEC70414.1| hypothetical protein OsI_01411 [Oryza sativa Indi...    60   2e-06
ref|NP_001042756.1| Os01g0281000 [Oryza sativa Japonica Group] g...    60   2e-06

>ref|XP_002307980.1| predicted protein [Populus trichocarpa] gi|222853956|gb|EEE91503.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 37/92 (40%), Positives = 49/92 (53%)
 Frame = -2

Query: 1037 VFSFQNGHVQYMLSCYDAELRYDCFKHLSSKVSISLFTAPVIEQCVHWXXXXXXXXXXXP 858
            V++ +NGHV +MLSCYDA+L YD  K  + +   S F    IEQ +HW            
Sbjct: 109  VYNRENGHVGFMLSCYDAQLSYDS-KTDTFQARYSPFARQTIEQSIHWERLRAPPVDTPA 167

Query: 857  HNIHALDFLD*LHSGDRVEIHWRGFFQKKETP 762
            H +H  D L+ L  GD +EI WR   + KE P
Sbjct: 168  HVLHTSDCLNDLKPGDHIEIQWR---RSKEFP 196


>ref|XP_002323241.1| predicted protein [Populus trichocarpa] gi|222867871|gb|EEF05002.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 35/92 (38%), Positives = 48/92 (52%)
 Frame = -2

Query: 1037 VFSFQNGHVQYMLSCYDAELRYDCFKHLSSKVSISLFTAPVIEQCVHWXXXXXXXXXXXP 858
            V++ +NGHV +MLSCYDA+L YD  K  + +   S F    IE+ +H             
Sbjct: 197  VYNRENGHVGFMLSCYDAQLSYDS-KTDTFQARYSPFARRTIEESIHRDRLRAPPVETPA 255

Query: 857  HNIHALDFLD*LHSGDRVEIHWRGFFQKKETP 762
            H +H  D L+ L  GD +EI WR   + KE P
Sbjct: 256  HVLHTSDCLNDLKPGDHIEIQWR---RSKEFP 284


>gb|EEE54342.1| hypothetical protein OsJ_01321 [Oryza sativa Japonica Group]
          Length = 382

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = -2

Query: 1037 VFSFQNGHVQYMLSCYDAELRYDCFKH-LSSKVSISLFTAPVIEQCVHWXXXXXXXXXXX 861
            V++ ++GHV +M+SCYDAEL YD       ++         V+E  VHW           
Sbjct: 215  VYNREHGHVGFMMSCYDAELSYDFHSDTFRARYPPHGRRTVVLEDGVHWDRVRAPPVDTH 274

Query: 860  PHNIHALDFLD*LHSGDRVEIHWRGFFQKKETP 762
             H++HA D L  L  GD +EI WR   + KE P
Sbjct: 275  AHDLHASDCLHELRPGDNIEIQWR---RNKEFP 304


>gb|EEC70414.1| hypothetical protein OsI_01411 [Oryza sativa Indica Group]
          Length = 382

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = -2

Query: 1037 VFSFQNGHVQYMLSCYDAELRYDCFKH-LSSKVSISLFTAPVIEQCVHWXXXXXXXXXXX 861
            V++ ++GHV +M+SCYDAEL YD       ++         V+E  VHW           
Sbjct: 215  VYNREHGHVGFMMSCYDAELSYDFHSDTFRARYPPHGRRTVVLEDGVHWDRVRAPPVDTH 274

Query: 860  PHNIHALDFLD*LHSGDRVEIHWRGFFQKKETP 762
             H++HA D L  L  GD +EI WR   + KE P
Sbjct: 275  AHDLHASDCLHELRPGDNIEIQWR---RNKEFP 304


>ref|NP_001042756.1| Os01g0281000 [Oryza sativa Japonica Group] gi|6498442|dbj|BAA87845.1|
            unknown protein [Oryza sativa Japonica Group]
            gi|11041564|dbj|BAB00648.2| unnamed protein product
            [Oryza sativa Japonica Group] gi|11138071|dbj|BAB17744.1|
            OSJNBa0036E02.18 [Oryza sativa Japonica Group]
            gi|13873014|dbj|BAB44118.1| unknown protein [Oryza sativa
            Japonica Group] gi|113532287|dbj|BAF04670.1| Os01g0281000
            [Oryza sativa Japonica Group]
            gi|215694300|dbj|BAG89293.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 415

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = -2

Query: 1037 VFSFQNGHVQYMLSCYDAELRYDCFKH-LSSKVSISLFTAPVIEQCVHWXXXXXXXXXXX 861
            V++ ++GHV +M+SCYDAEL YD       ++         V+E  VHW           
Sbjct: 238  VYNREHGHVGFMMSCYDAELSYDFHSDTFRARYPPHGRRTVVLEDGVHWDRVRAPPVDTH 297

Query: 860  PHNIHALDFLD*LHSGDRVEIHWRGFFQKKETP 762
             H++HA D L  L  GD +EI WR   + KE P
Sbjct: 298  AHDLHASDCLHELRPGDNIEIQWR---RNKEFP 327


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