BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008077
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplasti...   287   2e-75
ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ri...   285   8e-75
dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]    283   3e-74
dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare]    283   3e-74
gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indi...   282   7e-74

>ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplastic [Vitis vinifera]
           gi|297739542|emb|CBI29724.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  287 bits (735), Expect = 2e-75
 Identities = 147/169 (86%), Positives = 159/169 (94%), Gaps = 1/169 (0%)
 Frame = -1

Query: 748 PHRSR-QVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKL 572
           P R+R +VVKAVATPDSA+ELPLTAENVESVLDE+RPYL++DGGNV LHEIDGNVVRLKL
Sbjct: 55  PIRTRSRVVKAVATPDSAVELPLTAENVESVLDEIRPYLISDGGNVALHEIDGNVVRLKL 114

Query: 571 QGACGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYL 392
           QGACGSCPSS++TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL EIRPYL
Sbjct: 115 QGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYL 174

Query: 391 IGTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 245
           +G  GG L+LV IDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA
Sbjct: 175 VGAAGGSLELVGIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 223



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
 Frame = -1

Query: 514 RRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGTGGGDLKLVAIDEPIVK 335
           R  + T   +V      D    L L  EN+E VL EIRPYLI + GG++ L  ID  +V+
Sbjct: 53  RNPIRTRSRVVKAVATPDSAVELPLTAENVESVLDEIRPYLI-SDGGNVALHEIDGNVVR 111

Query: 334 VRITGPA----AGVMTVRVAVTQKLREKIPAIAA 245
           +++ G      + VMT+++ + ++L EKIP I A
Sbjct: 112 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA 145


>ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223531541|gb|EEF33371.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 226

 Score =  285 bits (729), Expect = 8e-75
 Identities = 148/174 (85%), Positives = 159/174 (91%), Gaps = 5/174 (2%)
 Frame = -1

Query: 751 IPHRS-----RQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNV 587
           IP RS     R VV+AVATP+SALELPLTAENVESVLDEVRPYL+ADGGNV LHEIDGNV
Sbjct: 49  IPCRSVRLTRRLVVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNV 108

Query: 586 VRLKLQGACGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGE 407
           VRLKLQGACGSCPSS++TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL E
Sbjct: 109 VRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEE 168

Query: 406 IRPYLIGTGGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 245
           IRPYL+G  GG L+LVAI+EPI K+RITGPAAGVMTVRVAVTQKLREKIPAIAA
Sbjct: 169 IRPYLVGAAGGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAA 222


>dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 227

 Score =  283 bits (724), Expect = 3e-74
 Identities = 142/166 (85%), Positives = 155/166 (93%)
 Frame = -1

Query: 742 RSRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 563
           R RQVV+A+A PD A+ELPLTAENVE VLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA
Sbjct: 57  RRRQVVQAIANPDPAVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 116

Query: 562 CGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGT 383
           CGSCP+S+ TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL EIRPYL GT
Sbjct: 117 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLDEIRPYLSGT 176

Query: 382 GGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 245
           GGG+L+ V+I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAA
Sbjct: 177 GGGELEFVSIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAA 222


>dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 225

 Score =  283 bits (724), Expect = 3e-74
 Identities = 142/166 (85%), Positives = 155/166 (93%)
 Frame = -1

Query: 742 RSRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 563
           R RQVV+A+A PD A+ELPLTAENVE VLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA
Sbjct: 55  RRRQVVQAIANPDPAVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 114

Query: 562 CGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGT 383
           CGSCP+S+ TMKMGIERRLME IPEIVAVEP+ DEETGLELNEENIE+VL EIRPYL GT
Sbjct: 115 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLDEIRPYLSGT 174

Query: 382 GGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 245
           GGG+L+ V+I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAA
Sbjct: 175 GGGELEFVSIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAA 220


>gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indica Group]
          Length = 228

 Score =  282 bits (721), Expect = 7e-74
 Identities = 141/166 (84%), Positives = 154/166 (92%)
 Frame = -1

Query: 742 RSRQVVKAVATPDSALELPLTAENVESVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGA 563
           R +QVVKA+A PD A+ELPLTAENVE VLDEVRPYLMADGGNV LHEIDGNVVRLKLQGA
Sbjct: 58  RQQQVVKAIANPDPAVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGA 117

Query: 562 CGSCPSSIVTMKMGIERRLMETIPEIVAVEPLTDEETGLELNEENIEQVLGEIRPYLIGT 383
           CGSCP+S+ TMKMGIERRLME IPEIVAVEP+ DEETGLELN+ENIE+VL EIRPYL GT
Sbjct: 118 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLSGT 177

Query: 382 GGGDLKLVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAA 245
           GGG+L+ VAI+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAA
Sbjct: 178 GGGELEFVAIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAA 223