BLASTX nr result

ID: Coptis25_contig00008075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008075
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247...   122   1e-25
emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]   122   1e-25
ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_002528361.1| conserved hypothetical protein [Ricinus comm...   112   7e-23

>ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera]
           gi|296083723|emb|CBI23712.3| unnamed protein product
           [Vitis vinifera]
          Length = 642

 Score =  122 bits (305), Expect = 1e-25
 Identities = 59/93 (63%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = -3

Query: 757 SSEPSQESRLRDMGDCSTSMNVIIPAGAHGGPGTRNGGPSSLTERWRSGGHCDCGGWDIG 578
           +S PS E  LR  GDCSTSM++++PAG HGGP TRNGGPSSL ERWRSGGHCDCGGWDIG
Sbjct: 499 ASLPS-ECCLRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSGGHCDCGGWDIG 557

Query: 577 FPLTVLTSRPSK-EI*TNTNAEGEHNSLDLIIE 482
            PLTVL +R +K E   +T+ + E+ S DL  +
Sbjct: 558 CPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQ 590


>emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]
          Length = 597

 Score =  122 bits (305), Expect = 1e-25
 Identities = 59/93 (63%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = -3

Query: 757 SSEPSQESRLRDMGDCSTSMNVIIPAGAHGGPGTRNGGPSSLTERWRSGGHCDCGGWDIG 578
           +S PS E  LR  GDCSTSM++++PAG HGGP TRNGGPSSL ERWRSGGHCDCGGWDIG
Sbjct: 454 ASLPS-ECCLRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSGGHCDCGGWDIG 512

Query: 577 FPLTVLTSRPSK-EI*TNTNAEGEHNSLDLIIE 482
            PLTVL +R +K E   +T+ + E+ S DL  +
Sbjct: 513 CPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQ 545


>ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|222852420|gb|EEE89967.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  118 bits (296), Expect = 1e-24
 Identities = 58/105 (55%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
 Frame = -3

Query: 775 SQVAPVSSEPSQESRLRDMGDCSTSMNVIIPAGAHGGPGTRNGGPSSLTERWRSGGHCDC 596
           +Q   V S        +D GDCSTS++++IPAG HGGP TRNGGPSSL +RW SGGHCDC
Sbjct: 454 TQAEDVKSSVLPACCAQDSGDCSTSIDILIPAGLHGGPRTRNGGPSSLIDRWISGGHCDC 513

Query: 595 GGWDIGFPLTVLTSRPS-KEI*TNTNAEGEHNSLDLIIEISRHHA 464
           GGWD+G PLTVL SR + KE  +  + +GE   +DL IE S + A
Sbjct: 514 GGWDLGCPLTVLKSRSAHKEFSSQADTQGECKLVDLFIEGSENGA 558


>ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  117 bits (294), Expect = 2e-24
 Identities = 54/89 (60%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = -3

Query: 727 RDMGDCSTSMNVIIPAGAHGGPGTRNGGPSSLTERWRSGGHCDCGGWDIGFPLTVLTSR- 551
           RD GDCSTS++++IPAG HGGP TRNGGPSSL +RWRSGG+CDCGGWD+G PLTVL SR 
Sbjct: 478 RDTGDCSTSIDILIPAGLHGGPRTRNGGPSSLIDRWRSGGYCDCGGWDLGCPLTVLKSRS 537

Query: 550 PSKEI*TNTNAEGEHNSLDLIIEISRHHA 464
            +KE  ++ + +GE   ++L I+ S + A
Sbjct: 538 ANKEFSSSADMQGECKLINLFIQGSENGA 566


>ref|XP_002528361.1| conserved hypothetical protein [Ricinus communis]
           gi|223532229|gb|EEF34033.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 637

 Score =  112 bits (281), Expect = 7e-23
 Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = -3

Query: 727 RDMGDCSTSMNVIIPAGAHGGPGTRNGGPSSLTERWRSGGHCDCGGWDIGFPLTVLTSRP 548
           R+ GDCSTS++++IP   HGGP TRNGGPS LTERW+SGG CDCGGWD+G PLTVL SR 
Sbjct: 501 RNTGDCSTSIDILIPVSLHGGPRTRNGGPSGLTERWKSGGCCDCGGWDLGCPLTVLKSRL 560

Query: 547 S-KEI*TNTNAEGEHNSLDLIIEISRHHA 464
           S KE+    + +GE   +DLI + S + A
Sbjct: 561 SNKELSPQADMQGECKLIDLITQGSENSA 589


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