BLASTX nr result

ID: Coptis25_contig00008022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008022
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48250.1| unknown [Lotus japonicus]                               98   2e-18
gb|AFK45318.1| unknown [Lotus japonicus]                               95   1e-17
ref|XP_002514179.1| Charged multivesicular body protein 4b, puta...    94   3e-17
ref|XP_004141038.1| PREDICTED: vacuolar protein sorting-associat...    92   7e-17
ref|XP_003525300.1| PREDICTED: vacuolar protein sorting-associat...    89   6e-16

>gb|AFK48250.1| unknown [Lotus japonicus]
          Length = 218

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 61/117 (52%), Positives = 61/117 (52%)
 Frame = +2

Query: 317 MFTRIFGKPKQETNALATLDXXXXXXXXXXXXXXXXXXXASXXXXXXXXXXXXXXXXXXX 496
           MFTRIFGKPKQE NALATLD                   AS                   
Sbjct: 1   MFTRIFGKPKQEANALATLDKLNETLDMLEKKEKVLIKKASQEVEKAKDFTKAK------ 54

Query: 497 XXXXXXXXXXXXXXXXXNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 667
                            NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK
Sbjct: 55  -----------------NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 94


>gb|AFK45318.1| unknown [Lotus japonicus]
          Length = 218

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 59/117 (50%), Positives = 59/117 (50%)
 Frame = +2

Query: 317 MFTRIFGKPKQETNALATLDXXXXXXXXXXXXXXXXXXXASXXXXXXXXXXXXXXXXXXX 496
           MFTRIFGKPKQE NAL T D                   AS                   
Sbjct: 1   MFTRIFGKPKQEANALTTFDKLNETLEMLEKKEKVLLKKASAEVEKAKEFTRAK------ 54

Query: 497 XXXXXXXXXXXXXXXXXNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 667
                            NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK
Sbjct: 55  -----------------NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 94


>ref|XP_002514179.1| Charged multivesicular body protein 4b, putative [Ricinus communis]
           gi|223546635|gb|EEF48133.1| Charged multivesicular body
           protein 4b, putative [Ricinus communis]
          Length = 218

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 58/117 (49%), Positives = 59/117 (50%)
 Frame = +2

Query: 317 MFTRIFGKPKQETNALATLDXXXXXXXXXXXXXXXXXXXASXXXXXXXXXXXXXXXXXXX 496
           MF R+FGKPKQETNAL TLD                   A                    
Sbjct: 1   MFNRLFGKPKQETNALTTLDKLNETLEMLEKKEKVLSKKA-------------------- 40

Query: 497 XXXXXXXXXXXXXXXXXNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 667
                            NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK
Sbjct: 41  ---IAEVERAKEFTRTKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 94


>ref|XP_004141038.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           2-like [Cucumis sativus]
           gi|449487999|ref|XP_004157906.1| PREDICTED: vacuolar
           protein sorting-associated protein 32 homolog 2-like
           [Cucumis sativus]
          Length = 218

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 57/117 (48%), Positives = 60/117 (51%)
 Frame = +2

Query: 317 MFTRIFGKPKQETNALATLDXXXXXXXXXXXXXXXXXXXASXXXXXXXXXXXXXXXXXXX 496
           MF R+FGKPKQE NALATL+                   A+                   
Sbjct: 1   MFNRLFGKPKQEANALATLEKLSETLEMLEKKENVLVKKAAAEVERAKEFTRGK------ 54

Query: 497 XXXXXXXXXXXXXXXXXNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 667
                            NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK
Sbjct: 55  -----------------NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 94


>ref|XP_003525300.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           1-like isoform 1 [Glycine max]
           gi|356513199|ref|XP_003525301.1| PREDICTED: vacuolar
           protein sorting-associated protein 32 homolog 1-like
           isoform 2 [Glycine max]
          Length = 218

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 56/117 (47%), Positives = 57/117 (48%)
 Frame = +2

Query: 317 MFTRIFGKPKQETNALATLDXXXXXXXXXXXXXXXXXXXASXXXXXXXXXXXXXXXXXXX 496
           MFTRIFGKPK E N L  LD                   A+                   
Sbjct: 1   MFTRIFGKPKPEVNTLTALDELNDKLEMLEKKEKVLLKKAAAEVEKAKEFTRAK------ 54

Query: 497 XXXXXXXXXXXXXXXXXNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 667
                            NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK
Sbjct: 55  -----------------NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAK 94


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