BLASTX nr result

ID: Coptis25_contig00008018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00008018
         (1515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79577.1|AC022464_35 F22G5.10 [Arabidopsis thaliana]             144   8e-32
ref|NP_850129.1| cell division protease ftsH-3 [Arabidopsis thal...   144   8e-32
gb|AFW82207.1| hypothetical protein ZEAMMB73_958383 [Zea mays]        144   8e-32
ref|XP_002889652.1| FTSH10 [Arabidopsis lyrata subsp. lyrata] gi...   144   8e-32
ref|XP_002881027.1| hypothetical protein ARALYDRAFT_344684 [Arab...   144   8e-32

>gb|AAF79577.1|AC022464_35 F22G5.10 [Arabidopsis thaliana]
          Length = 843

 Score =  144 bits (362), Expect = 8e-32
 Identities = 69/75 (92%), Positives = 72/75 (96%)
 Frame = -2

Query: 1226 RVISKLEHQTVAYHESGHAVTGWFLEHAEPLLKVTIVPRGTAELGFAQYVPSENLLMTKE 1047
            RVISKLE +TVAYHESGHAV GWFLEHAEPLLKVTIVPRGTA LGFAQYVP+ENLLMTKE
Sbjct: 587  RVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKE 646

Query: 1046 QLFDMTCMTLGGRAS 1002
            QLFDMTCMTLGGRA+
Sbjct: 647  QLFDMTCMTLGGRAA 661


>ref|NP_850129.1| cell division protease ftsH-3 [Arabidopsis thaliana]
            gi|75328225|sp|Q84WU8.1|FTSH3_ARATH RecName:
            Full=ATP-dependent zinc metalloprotease FTSH 3,
            mitochondrial; Short=AtFTSH3; Flags: Precursor
            gi|27754237|gb|AAO22572.1| putative AAA-type ATPase
            [Arabidopsis thaliana] gi|330253114|gb|AEC08208.1| cell
            division protease ftsH-3 [Arabidopsis thaliana]
          Length = 809

 Score =  144 bits (362), Expect = 8e-32
 Identities = 69/75 (92%), Positives = 72/75 (96%)
 Frame = -2

Query: 1226 RVISKLEHQTVAYHESGHAVTGWFLEHAEPLLKVTIVPRGTAELGFAQYVPSENLLMTKE 1047
            RVISKLE +TVAYHESGHAV GWFLEHAEPLLKVTIVPRGTA LGFAQYVP+ENLLMTKE
Sbjct: 573  RVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKE 632

Query: 1046 QLFDMTCMTLGGRAS 1002
            QLFDMTCMTLGGRA+
Sbjct: 633  QLFDMTCMTLGGRAA 647


>gb|AFW82207.1| hypothetical protein ZEAMMB73_958383 [Zea mays]
          Length = 815

 Score =  144 bits (362), Expect = 8e-32
 Identities = 69/75 (92%), Positives = 72/75 (96%)
 Frame = -2

Query: 1226 RVISKLEHQTVAYHESGHAVTGWFLEHAEPLLKVTIVPRGTAELGFAQYVPSENLLMTKE 1047
            RVISKLE +TVAYHESGHAV GWFLEHAEPLLKVTIVPRGTA LGFAQYVP+ENLLMTKE
Sbjct: 581  RVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKE 640

Query: 1046 QLFDMTCMTLGGRAS 1002
            QLFDMTCMTLGGRA+
Sbjct: 641  QLFDMTCMTLGGRAA 655


>ref|XP_002889652.1| FTSH10 [Arabidopsis lyrata subsp. lyrata] gi|297335494|gb|EFH65911.1|
            FTSH10 [Arabidopsis lyrata subsp. lyrata]
          Length = 813

 Score =  144 bits (362), Expect = 8e-32
 Identities = 69/75 (92%), Positives = 72/75 (96%)
 Frame = -2

Query: 1226 RVISKLEHQTVAYHESGHAVTGWFLEHAEPLLKVTIVPRGTAELGFAQYVPSENLLMTKE 1047
            RVISKLE +TVAYHESGHAV GWFLEHAEPLLKVTIVPRGTA LGFAQYVP+ENLLMTKE
Sbjct: 579  RVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKE 638

Query: 1046 QLFDMTCMTLGGRAS 1002
            QLFDMTCMTLGGRA+
Sbjct: 639  QLFDMTCMTLGGRAA 653


>ref|XP_002881027.1| hypothetical protein ARALYDRAFT_344684 [Arabidopsis lyrata subsp.
            lyrata] gi|297326866|gb|EFH57286.1| hypothetical protein
            ARALYDRAFT_344684 [Arabidopsis lyrata subsp. lyrata]
          Length = 818

 Score =  144 bits (362), Expect = 8e-32
 Identities = 69/75 (92%), Positives = 72/75 (96%)
 Frame = -2

Query: 1226 RVISKLEHQTVAYHESGHAVTGWFLEHAEPLLKVTIVPRGTAELGFAQYVPSENLLMTKE 1047
            RVISKLE +TVAYHESGHAV GWFLEHAEPLLKVTIVPRGTA LGFAQYVP+ENLLMTKE
Sbjct: 582  RVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKE 641

Query: 1046 QLFDMTCMTLGGRAS 1002
            QLFDMTCMTLGGRA+
Sbjct: 642  QLFDMTCMTLGGRAA 656


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