BLASTX nr result
ID: Coptis25_contig00008008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00008008
(1080 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004141286.1| PREDICTED: activating signal cointegrator 1 ... 89 3e-27
ref|XP_004164583.1| PREDICTED: LOW QUALITY PROTEIN: activating s... 87 2e-26
ref|XP_002510105.1| protein with unknown function [Ricinus commu... 88 4e-26
ref|XP_003634430.1| PREDICTED: uncharacterized protein LOC100854... 106 1e-20
emb|CBI19410.3| unnamed protein product [Vitis vinifera] 106 1e-20
>ref|XP_004141286.1| PREDICTED: activating signal cointegrator 1 complex subunit 2-like
[Cucumis sativus]
Length = 867
Score = 89.0 bits (219), Expect(2) = 3e-27
Identities = 49/97 (50%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Frame = -1
Query: 702 APNKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVAVADSREAALVNQAQKEVIXXXXXXXX 523
A N +W SR+ PQ+YVKDGKNYSYKV+GS+AVA+S EA+LV QAQKE+I
Sbjct: 708 AQNAPNSKWGSRRTPQYYVKDGKNYSYKVAGSIAVANSDEASLVTQAQKELIYGLGRGGN 767
Query: 522 XXXGAIKKLTESNEQQDQEAS------DVIEVGGRGR 430
GA+KKLTES + + S +V + GRGR
Sbjct: 768 LPLGAVKKLTESQQDSQPDVSAVDPRDNVRKSWGRGR 804
Score = 60.1 bits (144), Expect(2) = 3e-27
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = -3
Query: 1039 GRYTRKTKHDLPTSKALNSRGDGHSAKTAILASQXXXXXXXXDSFDDLGLNVVESGFEDD 860
GR+ RK+K D+P S+ L+SR + S +TA L SQ DSFDDLG+++ E+ ED+
Sbjct: 625 GRFVRKSKDDVPYSETLDSRNEADSVRTAALISQYEYEDEYDDSFDDLGISIAETATEDN 684
Query: 859 ENLGDRIKSAPMKS 818
E+L + S+ + S
Sbjct: 685 EDLVGQRPSSHLSS 698
>ref|XP_004164583.1| PREDICTED: LOW QUALITY PROTEIN: activating signal cointegrator 1
complex subunit 2-like [Cucumis sativus]
Length = 867
Score = 86.7 bits (213), Expect(2) = 2e-26
Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = -1
Query: 702 APNKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVAVADSREAALVNQAQKEVIXXXXXXXX 523
A N +W SR+ PQ+YVKDGKNYSYKV+GS+AVA+S EA+LV QAQKE+I
Sbjct: 708 AQNAPNSKWGSRRTPQYYVKDGKNYSYKVAGSIAVANSDEASLVTQAQKELIYGLGRGGN 767
Query: 522 XXXGAIKKLTESNEQQDQEAS------DVIEVGGRGR 430
GA+ KLTES + + S +V + GRGR
Sbjct: 768 LPLGAVXKLTESQQDSQPDVSAVDPRDNVRKSWGRGR 804
Score = 60.1 bits (144), Expect(2) = 2e-26
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = -3
Query: 1039 GRYTRKTKHDLPTSKALNSRGDGHSAKTAILASQXXXXXXXXDSFDDLGLNVVESGFEDD 860
GR+ RK+K D+P S+ L+SR + S +TA L SQ DSFDDLG+++ E+ ED+
Sbjct: 625 GRFVRKSKDDVPYSETLDSRNEADSVRTAALISQYEYEDEYDDSFDDLGISIAETATEDN 684
Query: 859 ENLGDRIKSAPMKS 818
E+L + S+ + S
Sbjct: 685 EDLVGQRPSSHLSS 698
>ref|XP_002510105.1| protein with unknown function [Ricinus communis]
gi|223550806|gb|EEF52292.1| protein with unknown function
[Ricinus communis]
Length = 2020
Score = 88.2 bits (217), Expect(2) = 4e-26
Identities = 47/90 (52%), Positives = 58/90 (64%)
Frame = -1
Query: 702 APNKSGPRWNSRKGPQFYVKDGKNYSYKVSGSVAVADSREAALVNQAQKEVIXXXXXXXX 523
A S +W SRK PQFYVKDGKNYSYKV+GS+AVA+S EA L++Q Q + I
Sbjct: 1856 AQASSNSKWGSRKKPQFYVKDGKNYSYKVTGSIAVANSNEALLLSQIQADQIYGLGRGGN 1915
Query: 522 XXXGAIKKLTESNEQQDQEASDVIEVGGRG 433
GA+K+ TE EQQ ++ SD E GRG
Sbjct: 1916 IPTGAVKQWTEYQEQQHRKESDEPETEGRG 1945
Score = 57.0 bits (136), Expect(2) = 4e-26
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = -3
Query: 1039 GRYTRKTKHDLPTSKALNSRGDGHSAKTAILASQXXXXXXXXDSFDDLGLNVVESGFEDD 860
GR+ RK+ +++P L++R + +A+T L SQ DSFDDLGL+V ESG E++
Sbjct: 1775 GRFVRKS-NNVPEQYTLDARDEKDAARTVALISQYEYEDEYDDSFDDLGLSVAESGLEEN 1833
Query: 859 ENLGDRIKSAPMKS 818
E L DRI S KS
Sbjct: 1834 ETLSDRISSNLGKS 1847
>ref|XP_003634430.1| PREDICTED: uncharacterized protein LOC100854438 [Vitis vinifera]
Length = 866
Score = 106 bits (264), Expect = 1e-20
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = -1
Query: 681 RWNSRKGPQFYVKDGKNYSYKVSGSVAVADSREAALVNQAQKEVIXXXXXXXXXXXGAIK 502
+WNSRK PQFYVKDGKNYSYK++GSVA A+ EA++VNQAQKE+I GA+K
Sbjct: 712 KWNSRKKPQFYVKDGKNYSYKIAGSVAAANCIEASIVNQAQKELIHGLGRGGNLPLGAVK 771
Query: 501 KLTESNEQQDQEASDVIEVGGRGRPAS 421
KLTE NE +D E S+++E+GGRG+P +
Sbjct: 772 KLTELNEDED-EQSEIVEMGGRGKPGN 797
Score = 67.8 bits (164), Expect = 4e-09
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = -3
Query: 1039 GRYTRKTKHDLPTSKALNSRGDGHSAKTAILASQXXXXXXXXDSFDDLGLNVVESGFEDD 860
GRYTRK+K +LP K L+SR + SAKTA L Q DSFDDLGL+VVESG +
Sbjct: 624 GRYTRKSKVNLPNYKTLDSRSEQDSAKTAALVMQYEYEDEYDDSFDDLGLSVVESGLAET 683
Query: 859 ENLGDRIKS 833
E L D+I S
Sbjct: 684 EILEDKINS 692
>emb|CBI19410.3| unnamed protein product [Vitis vinifera]
Length = 868
Score = 106 bits (264), Expect = 1e-20
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = -1
Query: 681 RWNSRKGPQFYVKDGKNYSYKVSGSVAVADSREAALVNQAQKEVIXXXXXXXXXXXGAIK 502
+WNSRK PQFYVKDGKNYSYK++GSVA A+ EA++VNQAQKE+I GA+K
Sbjct: 728 KWNSRKKPQFYVKDGKNYSYKIAGSVAAANCIEASIVNQAQKELIHGLGRGGNLPLGAVK 787
Query: 501 KLTESNEQQDQEASDVIEVGGRGRPAS 421
KLTE NE +D E S+++E+GGRG+P +
Sbjct: 788 KLTELNEDED-EQSEIVEMGGRGKPGN 813
Score = 67.8 bits (164), Expect = 4e-09
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = -3
Query: 1039 GRYTRKTKHDLPTSKALNSRGDGHSAKTAILASQXXXXXXXXDSFDDLGLNVVESGFEDD 860
GRYTRK+K +LP K L+SR + SAKTA L Q DSFDDLGL+VVESG +
Sbjct: 640 GRYTRKSKVNLPNYKTLDSRSEQDSAKTAALVMQYEYEDEYDDSFDDLGLSVVESGLAET 699
Query: 859 ENLGDRIKS 833
E L D+I S
Sbjct: 700 EILEDKINS 708