BLASTX nr result

ID: Coptis25_contig00007993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007993
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315749.1| predicted protein [Populus trichocarpa] gi|2...   344   2e-92
ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arab...   342   7e-92
ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-contai...   341   1e-91
ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing p...   339   5e-91
ref|NP_001238453.1| uncharacterized protein LOC100306668 precurs...   338   1e-90

>ref|XP_002315749.1| predicted protein [Populus trichocarpa] gi|222864789|gb|EEF01920.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  344 bits (882), Expect = 2e-92
 Identities = 164/217 (75%), Positives = 191/217 (88%)
 Frame = -1

Query: 861 MERRKRMRSETKLCIILGIFMTLFLRNISALSITVNDVECVSEYVLYEGDNISGNFVVVD 682
           MERR++     ++ ++  + M+ F+  I +LS+TVNDVECV EYVLYEGD +SGNFVVVD
Sbjct: 1   MERRRK-----QIYVVAALLMS-FISRIYSLSVTVNDVECVYEYVLYEGDTVSGNFVVVD 54

Query: 681 HDIFWSSDHPGIDFTVSSPGGNAVHSLKGTSGDKFQFKAPRSGMYKFCFHNPYATPETVS 502
           HDIFW SDHPGIDFT +SPG N VH++KGTSGDKF+FKAPRSGMYKFCFHNPYATPETVS
Sbjct: 55  HDIFWGSDHPGIDFTATSPGDNTVHTVKGTSGDKFEFKAPRSGMYKFCFHNPYATPETVS 114

Query: 501 FYIHVGHIPNEHDLAKDEHLNPINVKIAELREALESVTAEQTYLRARDSRHRHTNESTRK 322
           FYIHVGHIP+EHDLAKDEHLNP+NVKIAELREALESVTAEQ YL+ARD RHRHTNESTR+
Sbjct: 115 FYIHVGHIPSEHDLAKDEHLNPVNVKIAELREALESVTAEQRYLKARDIRHRHTNESTRR 174

Query: 321 RLHLYTVLEYLVLVAASSLQIIYIRRLFSNTVSYNRV 211
           R+  YTV EYL+L AAS+LQ++YIRRLFS +V+YNRV
Sbjct: 175 RVIAYTVGEYLLLAAASTLQVVYIRRLFSKSVAYNRV 211


>ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arabidopsis lyrata subsp.
           lyrata] gi|297329220|gb|EFH59639.1| hypothetical protein
           ARALYDRAFT_479795 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  342 bits (877), Expect = 7e-92
 Identities = 161/217 (74%), Positives = 190/217 (87%)
 Frame = -1

Query: 861 MERRKRMRSETKLCIILGIFMTLFLRNISALSITVNDVECVSEYVLYEGDNISGNFVVVD 682
           MERR+   ++  + +++G+ +   +  IS+LS+TVND ECV EYVLYEGD +SGNFVVVD
Sbjct: 1   MERRQ---AKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVD 57

Query: 681 HDIFWSSDHPGIDFTVSSPGGNAVHSLKGTSGDKFQFKAPRSGMYKFCFHNPYATPETVS 502
           HDIFW SDHPG+DFTV+SP GN V +LKGTSGDKF+FKAPRSGMYKFCFHNPY+TPETVS
Sbjct: 58  HDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPRSGMYKFCFHNPYSTPETVS 117

Query: 501 FYIHVGHIPNEHDLAKDEHLNPINVKIAELREALESVTAEQTYLRARDSRHRHTNESTRK 322
           FYIHVGHIPNEHDLAKDEHL+P+NVKIAELREALESV AEQ YL+ARD+RHRHTNESTRK
Sbjct: 118 FYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRK 177

Query: 321 RLHLYTVLEYLVLVAASSLQIIYIRRLFSNTVSYNRV 211
           R+ LYTV EY+ L AAS LQ++YIR+LFS +V+YNRV
Sbjct: 178 RVILYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214


>ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-containing protein A [Vitis
           vinifera] gi|297737114|emb|CBI26315.3| unnamed protein
           product [Vitis vinifera]
          Length = 215

 Score =  341 bits (875), Expect = 1e-91
 Identities = 166/217 (76%), Positives = 188/217 (86%)
 Frame = -1

Query: 861 MERRKRMRSETKLCIILGIFMTLFLRNISALSITVNDVECVSEYVLYEGDNISGNFVVVD 682
           MERR   R  T   I + +F + F+  ISALS+TVN+VECV EYV+YEGD +SGNFVVVD
Sbjct: 1   MERRHTHRCATGF-IFIALFFS-FIHRISALSVTVNEVECVYEYVIYEGDTVSGNFVVVD 58

Query: 681 HDIFWSSDHPGIDFTVSSPGGNAVHSLKGTSGDKFQFKAPRSGMYKFCFHNPYATPETVS 502
           HDIFW SDHPGIDFTV+SP GN VH+LKGTSGDKF+FKAPRSGMYKFCF N YATPETVS
Sbjct: 59  HDIFWGSDHPGIDFTVTSPAGNTVHTLKGTSGDKFEFKAPRSGMYKFCFQNSYATPETVS 118

Query: 501 FYIHVGHIPNEHDLAKDEHLNPINVKIAELREALESVTAEQTYLRARDSRHRHTNESTRK 322
           FYIHVGHIPNEH+LAKDEHL+PINVKIAELREALESVTAEQ YL+ARD+RHRHTNESTRK
Sbjct: 119 FYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRK 178

Query: 321 RLHLYTVLEYLVLVAASSLQIIYIRRLFSNTVSYNRV 211
           R+  YT+ EYL+L  AS LQ++YIRRLFS +V+YNRV
Sbjct: 179 RVIFYTLGEYLLLALASGLQVVYIRRLFSKSVAYNRV 215


>ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis
           thaliana] gi|75273406|sp|Q9LIL4.1|P24B3_ARATH RecName:
           Full=Transmembrane emp24 domain-containing protein
           p24beta3; AltName: Full=p24 family protein beta2;
           Short=p24beta2; AltName: Full=p24 family protein beta3;
           Short=p24beta3; Flags: Precursor
           gi|11994713|dbj|BAB03029.1| coated vesicle membrane
           protein-like [Arabidopsis thaliana]
           gi|17979492|gb|AAL50082.1| AT3g22845/MWI23_22
           [Arabidopsis thaliana] gi|20147305|gb|AAM10366.1|
           AT3g22845/MWI23_22 [Arabidopsis thaliana]
           gi|332643162|gb|AEE76683.1| emp24/gp25L/p24 family/GOLD
           domain-containing protein [Arabidopsis thaliana]
          Length = 214

 Score =  339 bits (870), Expect = 5e-91
 Identities = 159/217 (73%), Positives = 189/217 (87%)
 Frame = -1

Query: 861 MERRKRMRSETKLCIILGIFMTLFLRNISALSITVNDVECVSEYVLYEGDNISGNFVVVD 682
           MERR+   ++  + +++G+ +   +  IS+LS+TVND ECV EYVLYEGD +SGNFVVVD
Sbjct: 1   MERRQ---AKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVD 57

Query: 681 HDIFWSSDHPGIDFTVSSPGGNAVHSLKGTSGDKFQFKAPRSGMYKFCFHNPYATPETVS 502
           HDIFW SDHPG+DFTV+SP GN V +LKGTSGDKF+FKAP+SGMYKFCFHNPY+TPETVS
Sbjct: 58  HDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVS 117

Query: 501 FYIHVGHIPNEHDLAKDEHLNPINVKIAELREALESVTAEQTYLRARDSRHRHTNESTRK 322
           FYIHVGHIPNEHDLAKDEHL+P+NVKIAELREALESV AEQ YL+ARD+RHRHTNESTRK
Sbjct: 118 FYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRK 177

Query: 321 RLHLYTVLEYLVLVAASSLQIIYIRRLFSNTVSYNRV 211
           R+  YTV EY+ L AAS LQ++YIR+LFS +V+YNRV
Sbjct: 178 RVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214


>ref|NP_001238453.1| uncharacterized protein LOC100306668 precursor [Glycine max]
           gi|255629227|gb|ACU14958.1| unknown [Glycine max]
          Length = 210

 Score =  338 bits (867), Expect = 1e-90
 Identities = 163/211 (77%), Positives = 183/211 (86%)
 Frame = -1

Query: 843 MRSETKLCIILGIFMTLFLRNISALSITVNDVECVSEYVLYEGDNISGNFVVVDHDIFWS 664
           MRS  K+  +L   M  F   I +LS+TVNDVECV EYVLYEGD +SGNFVVVDHDIFW+
Sbjct: 1   MRS-AKMWTVLMCLMVSFFARIESLSVTVNDVECVYEYVLYEGDTVSGNFVVVDHDIFWN 59

Query: 663 SDHPGIDFTVSSPGGNAVHSLKGTSGDKFQFKAPRSGMYKFCFHNPYATPETVSFYIHVG 484
           SDHPGIDFTV+S  GN VH++KGTSGDKF FKAP  GMYKFCFHNPY+TPETVSFYIHVG
Sbjct: 60  SDHPGIDFTVTSAAGNTVHNIKGTSGDKFSFKAPTHGMYKFCFHNPYSTPETVSFYIHVG 119

Query: 483 HIPNEHDLAKDEHLNPINVKIAELREALESVTAEQTYLRARDSRHRHTNESTRKRLHLYT 304
           HIP+EHDLAKDEHL+PINVKIAELREALESVTAEQ YL+ARD+RHRHTNESTRKR+  YT
Sbjct: 120 HIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVVFYT 179

Query: 303 VLEYLVLVAASSLQIIYIRRLFSNTVSYNRV 211
           V EYL+L A S+LQ+IYIRRLFS +V+YNRV
Sbjct: 180 VGEYLLLAAVSALQVIYIRRLFSKSVAYNRV 210


Top