BLASTX nr result
ID: Coptis25_contig00007986
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007986
(1723 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26110.3| unnamed protein product [Vitis vinifera] 226 1e-56
ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding prote... 226 1e-56
emb|CBI34243.3| unnamed protein product [Vitis vinifera] 212 3e-52
ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote... 207 5e-51
ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus c... 195 4e-47
>emb|CBI26110.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 226 bits (576), Expect = 1e-56
Identities = 163/447 (36%), Positives = 216/447 (48%), Gaps = 10/447 (2%)
Frame = +1
Query: 112 GHVPVFHCTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVER 291
GH+PVF CTV+IA+ SFTGEP WS LK L P LE
Sbjct: 114 GHIPVFFCTVDIAKMSFTGEPAKTKKQAQKNAAMAAWSALKRLSQASSSTSSAP-LESGG 172
Query: 292 KDEQEQVVVARALAKLCPPDMKRSTIQNDRHSVRQRSAPVHRDMKPARSGMHLYPVPYPS 471
DE EQV VAR LA L PP+ +S ++ + Q S P RD+ P + + LY +
Sbjct: 173 NDELEQVTVARYLASLQPPEANKSAQRDGL--LGQGSTPCRRDLMPNDNAISLYSMHCRD 230
Query: 472 WPYLHCTPEMTM-YQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQYI 645
W H P + + +Q W E+ SQQQN ++ LP A + P PQ+ P + SIFQPDHG
Sbjct: 231 WS--HSAPLIQLAHQSWPKERASQQQNHLLALPSAPTTLPRPQMSPIIRSIFQPDHGPCF 288
Query: 646 IARDQKP--ISGGIPMAAPGPSNLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGD 819
+ R+Q+P +S GI GP FSN +MP+ V + S VTIQEI EE+PK E +WL D
Sbjct: 289 LPREQEPAPLSPGI-----GPFLYFSNGSMPVPVSNLSQVTIQEI-EEKPKVEQEWLNVD 342
Query: 820 TNSNCHKVEVQSNSSVLPQFEVQNLSASNKSRPEPL---LQNEPHEDQKSGKLNIGHSKL 990
NS C K+ SN S L E+ S S EP+ LQ + E+ +G +++
Sbjct: 343 ANSGCWKINFPSNLSGLSLVEIPKCPISPNSHSEPIQEALQGKEEENSAGNSAQLGTNQI 402
Query: 991 EGTQSELSKWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSKLPQHPSGPSSLGVA 1170
+ W S DT RS A + ++L + D +S + + ++ +
Sbjct: 403 QRLA-----WTSPRFADT--RSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGS 455
Query: 1171 KYCSQSSNAAXXXXXXXXXXXXXXXXXESLNPWVPASATFRTAAPACSARPRL---MKIG 1341
+AA S + +V A R AAP S RP L G
Sbjct: 456 SRVYTRPSAAPVTIRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTG 515
Query: 1342 ATPSHHFMAPAVQIRSVVPVCSAPPAK 1422
P FMAPAV IRSVVPVCSAPPAK
Sbjct: 516 VRPCSRFMAPAVNIRSVVPVCSAPPAK 542
>ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
vinifera]
Length = 563
Score = 226 bits (576), Expect = 1e-56
Identities = 163/447 (36%), Positives = 216/447 (48%), Gaps = 10/447 (2%)
Frame = +1
Query: 112 GHVPVFHCTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVER 291
GH+PVF CTV+IA+ SFTGEP WS LK L P LE
Sbjct: 114 GHIPVFFCTVDIAKMSFTGEPAKTKKQAQKNAAMAAWSALKRLSQASSSTSSAP-LESGG 172
Query: 292 KDEQEQVVVARALAKLCPPDMKRSTIQNDRHSVRQRSAPVHRDMKPARSGMHLYPVPYPS 471
DE EQV VAR LA L PP+ +S ++ + Q S P RD+ P + + LY +
Sbjct: 173 NDELEQVTVARYLASLQPPEANKSAQRDGL--LGQGSTPCRRDLMPNDNAISLYSMHCRD 230
Query: 472 WPYLHCTPEMTM-YQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQYI 645
W H P + + +Q W E+ SQQQN ++ LP A + P PQ+ P + SIFQPDHG
Sbjct: 231 WS--HSAPLIQLAHQSWPKERASQQQNHLLALPSAPTTLPRPQMSPIIRSIFQPDHGPCF 288
Query: 646 IARDQKP--ISGGIPMAAPGPSNLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGD 819
+ R+Q+P +S GI GP FSN +MP+ V + S VTIQEI EE+PK E +WL D
Sbjct: 289 LPREQEPAPLSPGI-----GPFLYFSNGSMPVPVSNLSQVTIQEI-EEKPKVEQEWLNVD 342
Query: 820 TNSNCHKVEVQSNSSVLPQFEVQNLSASNKSRPEPL---LQNEPHEDQKSGKLNIGHSKL 990
NS C K+ SN S L E+ S S EP+ LQ + E+ +G +++
Sbjct: 343 ANSGCWKINFPSNLSGLSLVEIPKCPISPNSHSEPIQEALQGKEEENSAGNSAQLGTNQI 402
Query: 991 EGTQSELSKWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSKLPQHPSGPSSLGVA 1170
+ W S DT RS A + ++L + D +S + + ++ +
Sbjct: 403 QRLA-----WTSPRFADT--RSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGS 455
Query: 1171 KYCSQSSNAAXXXXXXXXXXXXXXXXXESLNPWVPASATFRTAAPACSARPRL---MKIG 1341
+AA S + +V A R AAP S RP L G
Sbjct: 456 SRVYTRPSAAPVTIRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTG 515
Query: 1342 ATPSHHFMAPAVQIRSVVPVCSAPPAK 1422
P FMAPAV IRSVVPVCSAPPAK
Sbjct: 516 VRPCSRFMAPAVNIRSVVPVCSAPPAK 542
>emb|CBI34243.3| unnamed protein product [Vitis vinifera]
Length = 551
Score = 212 bits (539), Expect = 3e-52
Identities = 173/459 (37%), Positives = 218/459 (47%), Gaps = 10/459 (2%)
Frame = +1
Query: 112 GHVPVFHCTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVER 291
GHVPVF CTVEIA SFTGE WS L++L Q P +E E
Sbjct: 114 GHVPVFSCTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALRKLS--QRGSPSSPSVESEC 171
Query: 292 KDEQEQVVVARALAKLCPPDMKRSTIQNDRHSVRQRSAPVHRD---MKPARSGMHLYPVP 462
+EQEQV++AR LA L P K + QNDR +QRS + RD P M
Sbjct: 172 NEEQEQVIIARVLASLRPS--KSNNKQNDRQHGQQRSGSICRDSTPQTPISCSMQYQSTV 229
Query: 463 YPSWPYLHCTPEMTMYQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQ 639
PS+ PEM MYQ+WQ EQ++Q QNR++ LPV +P P P PF+ S+F+PDH
Sbjct: 230 DPSF-----FPEMAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCL 284
Query: 640 YIIARDQKPISGG--IPMAAPGPSNLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLR 813
Y Q+PI+ G +AA G S SN +P +R RS VTIQEI E +
Sbjct: 285 YFPTEVQQPITMGPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEE----------K 334
Query: 814 GDTNSNCHKVEVQSNSSVLPQFEVQNLSASNKSRPEPLLQNEPHEDQKSGKLNIGHSKLE 993
+ S EV SV P N A N+ EP+ ++ ++ G +LE
Sbjct: 335 TEERSEFSPSEV----SVSPALGDNNTEAINQ---EPIQEDNKQNTEELGGKIATSVQLE 387
Query: 994 GTQSELSKWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSK-LPQHPSGPSSLGVA 1170
Q W T+ RS + G E L GFDSS+S P HP G SS +
Sbjct: 388 RNQPGQFGW-------TSRRSVDSRLGPIEFQLQRPHGFDSSQSNPRPYHPPGLSSYRSS 440
Query: 1171 KYCSQSSNAAXXXXXXXXXXXXXXXXXESLNPWVPASATFRTAAPACSARPR--LMKIGA 1344
+ S+ AA ++L +PA RT P S RPR M G
Sbjct: 441 R--PPSTVAAPVMTRTGDPVSSVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGR 498
Query: 1345 TPSHHFMAPAVQIRSVVPVCSAPPA-KLPESSQKVLHSI 1458
P MAPAVQIR+VVPVCSAPPA K+P S K + SI
Sbjct: 499 GPP-RAMAPAVQIRTVVPVCSAPPARKIPRPSSKEMTSI 536
>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
Length = 532
Score = 207 bits (528), Expect = 5e-51
Identities = 172/456 (37%), Positives = 215/456 (47%), Gaps = 10/456 (2%)
Frame = +1
Query: 112 GHVPVFHCTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVER 291
GHVPVF CTVEIA SFTGE WS L+ KLE E
Sbjct: 114 GHVPVFSCTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALR-------------KLESEC 160
Query: 292 KDEQEQVVVARALAKLCPPDMKRSTIQNDRHSVRQRSAPVHRD---MKPARSGMHLYPVP 462
+EQEQV++AR LA L P K + QNDR +QRS + RD P M
Sbjct: 161 NEEQEQVIIARVLASLRPS--KSNNKQNDRQHGQQRSGSICRDSTPQTPISCSMQYQSTV 218
Query: 463 YPSWPYLHCTPEMTMYQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQ 639
PS+ PEM MYQ+WQ EQ++Q QNR++ LPV +P P P PF+ S+F+PDH
Sbjct: 219 DPSF-----FPEMAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCL 273
Query: 640 YIIARDQKPISGG--IPMAAPGPSNLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLR 813
Y Q+PI+ G +AA G S SN +P +R RS VTIQEI E +
Sbjct: 274 YFPTEVQQPITMGPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEE----------K 323
Query: 814 GDTNSNCHKVEVQSNSSVLPQFEVQNLSASNKSRPEPLLQNEPHEDQKSGKLNIGHSKLE 993
+ S EV SV P N A N+ EP+ ++ ++ G +LE
Sbjct: 324 TEERSEFSPSEV----SVSPALGDNNTEAINQ---EPIQEDNKQNTEELGGKIATSVQLE 376
Query: 994 GTQSELSKWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSK-LPQHPSGPSSLGVA 1170
Q W T+ RS + G E L GFDSS+S P HP G SS +
Sbjct: 377 RNQPGQFGW-------TSRRSVDSRLGPIEFQLQRPHGFDSSQSNPRPYHPPGLSSYRSS 429
Query: 1171 KYCSQSSNAAXXXXXXXXXXXXXXXXXESLNPWVPASATFRTAAPACSARPR--LMKIGA 1344
+ S+ AA ++L +PA RT P S RPR M G
Sbjct: 430 R--PPSTVAAPVMTRTGDPVSSVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGR 487
Query: 1345 TPSHHFMAPAVQIRSVVPVCSAPPA-KLPESSQKVL 1449
P MAPAVQIR+VVPVCSAPPA K+P SSQ+ L
Sbjct: 488 GPP-RAMAPAVQIRTVVPVCSAPPARKIPSSSQEGL 522
>ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus communis]
gi|223548237|gb|EEF49728.1| hypothetical protein
RCOM_1429110 [Ricinus communis]
Length = 568
Score = 195 bits (495), Expect = 4e-47
Identities = 162/487 (33%), Positives = 230/487 (47%), Gaps = 16/487 (3%)
Frame = +1
Query: 112 GHVPVFHCTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKEL-PHLQXXXXXLPKLEVE 288
GHVPVF CTVE+A SFTGEP WS LK L H L VE
Sbjct: 114 GHVPVFSCTVELAGMSFTGEPARTKKQAQKNAAMAAWSALKRLVQHGSSSSSSLSSSLVE 173
Query: 289 RK---DEQEQVVVARALAKLCPPDMKRSTIQNDRHSVRQRSAPVHRDMKPARSGMHLYPV 459
+ +EQEQVV+AR LA + P ++K + QND + +R PV +D+ P LYP+
Sbjct: 174 NRKGSEEQEQVVIARFLASVQPSELKINK-QNDCQTGHERFIPVCKDLTPPTPS--LYPM 230
Query: 460 PYPSWPYLHCTPEMTMYQLWQPEQVSQQQNRIITLPVAQS-PPVPQILPFVHSIFQPDHG 636
+W Y +PE+ +YQ+WQ EQ+ Q NR++TL V + PP P +LP++ S+ P+
Sbjct: 231 QSQNWAYPSFSPEIAIYQMWQQEQLLQLHNRLLTLQVPPAPPPAPPMLPYMQSVLPPNSH 290
Query: 637 QYIIARDQK--PISGGIPMAAPGPSNLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWL 810
+ R Q+ P+ I +A+ GP S+ VR +S VTIQEI+EE+P+ D
Sbjct: 291 LFFPLRKQETVPVGPRITIASSGPLLCLSDNVDSDSVRGKSAVTIQEINEEKPEDLSDC- 349
Query: 811 RGDTNSNCHKVEVQSNSSVLPQFEVQNLSASNKSRPEPLLQNEPHEDQKSGKLNIGHSKL 990
S S + + NLSA + + E H+D K+ N SK+
Sbjct: 350 --------------SPSIISDPPVLGNLSAEARFK-------ESHDDDKN---NAVESKV 385
Query: 991 EGTQSELSKWPSQSPMDTAS-----RSEATSPGRTEIFLGSSGGFDSSRSKLPQHPSGPS 1155
E + + S +T S SPG + +S F +S P P
Sbjct: 386 ENVRLAENPSGQSSHRNTDSGYSQVDFRVQSPG-VFVSCHASSQFSPRQSSTSCRP--PP 442
Query: 1156 SLGVAKYCSQSSNAAXXXXXXXXXXXXXXXXXESLNPWVPASATFRTAAPACSARPRLMK 1335
++ + + AA L +P RT AP+ SARP+ +
Sbjct: 443 TVMIRNVGPRPLPAAPPVRIRTMGPVSSVPRPHDLAAQIPGPPRMRTGAPSYSARPQPQR 502
Query: 1336 IGATPSH-HFMAPAVQIRSVVPVCSAPP--AKLPESSQK-VLHSIAERTKEPKDVATANS 1503
+ H FMAPAV+IRSVVPVCSAPP K+P + Q+ L + + P+D++T S
Sbjct: 503 MDFVGVHPRFMAPAVRIRSVVPVCSAPPPARKMPTAGQEGALLNKQKNGSVPEDIST-TS 561
Query: 1504 ELSNLRI 1524
E S LRI
Sbjct: 562 EFSKLRI 568