BLASTX nr result
ID: Coptis25_contig00007971
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007971 (469 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] ... 80 2e-13 ref|XP_002445319.1| hypothetical protein SORBIDRAFT_07g009320 [S... 70 2e-10 gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata] 67 1e-09 ref|XP_002460254.1| hypothetical protein SORBIDRAFT_02g025543 [S... 66 3e-09 gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon... 65 4e-09 >ref|XP_003614469.1| Helicase-like protein [Medicago truncatula] gi|355515804|gb|AES97427.1| Helicase-like protein [Medicago truncatula] Length = 377 Score = 79.7 bits (195), Expect = 2e-13 Identities = 38/102 (37%), Positives = 57/102 (55%) Frame = +2 Query: 155 RTSLRSYHNSARGFEDSPYIEPFRL*SFKTCHHCGAKLFPSKTSSLCCLNGQVRXXXXXX 334 R + ++ HN+AR F+++ + L + +TC C KLF +T +CC NG V Sbjct: 98 RCTFQAIHNNARNFKNTVMMINALLPTPRTCRRCNTKLFYKETQYMCCKNGNVIVTQVAA 157 Query: 335 XXXXXXXXTSQSADSIHFRENIRSYNHVFSFTSMGVHIDDDL 460 + + + HFR+NIR YNHV SFTS+GVHID+ + Sbjct: 158 PEELQQLFSDTTIEGRHFRQNIRGYNHVMSFTSLGVHIDETM 199 >ref|XP_002445319.1| hypothetical protein SORBIDRAFT_07g009320 [Sorghum bicolor] gi|241941669|gb|EES14814.1| hypothetical protein SORBIDRAFT_07g009320 [Sorghum bicolor] Length = 1342 Score = 69.7 bits (169), Expect = 2e-10 Identities = 33/74 (44%), Positives = 39/74 (52%) Frame = +2 Query: 245 CHHCGAKLFPSKTSSLCCLNGQVRXXXXXXXXXXXXXXTSQSADSIHFRENIRSYNHVFS 424 CHHCGAK FP + CC NG+V TS AD+ HFR NIR +N FS Sbjct: 266 CHHCGAKRFPKEPPGFCCRNGKVELNAPVVPNQLMRLWTSSDADARHFRNNIRFFNGHFS 325 Query: 425 FTSMGVHIDDDLAN 466 FTS+ +D AN Sbjct: 326 FTSLYCRLDSATAN 339 >gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata] Length = 1605 Score = 67.4 bits (163), Expect = 1e-09 Identities = 33/84 (39%), Positives = 42/84 (50%) Frame = +2 Query: 215 EPFRL*SFKTCHHCGAKLFPSKTSSLCCLNGQVRXXXXXXXXXXXXXXTSQSADSIHFRE 394 E +L S CHHCGAK FP + CC +G+V +S D+ HFR Sbjct: 224 ETHKLKSVPNCHHCGAKRFPKEPPGFCCRSGKVELNAPVIPSQLMRLWSSSDTDARHFRN 283 Query: 395 NIRSYNHVFSFTSMGVHIDDDLAN 466 NIR +N FSFTS+ +D AN Sbjct: 284 NIRFFNGHFSFTSLYCRLDSATAN 307 >ref|XP_002460254.1| hypothetical protein SORBIDRAFT_02g025543 [Sorghum bicolor] gi|241923631|gb|EER96775.1| hypothetical protein SORBIDRAFT_02g025543 [Sorghum bicolor] Length = 1286 Score = 66.2 bits (160), Expect = 3e-09 Identities = 33/84 (39%), Positives = 42/84 (50%) Frame = +2 Query: 215 EPFRL*SFKTCHHCGAKLFPSKTSSLCCLNGQVRXXXXXXXXXXXXXXTSQSADSIHFRE 394 E +L S CHHCGAK FP + CC +G+V +S D+ HFR Sbjct: 219 ETHKLKSIPNCHHCGAKRFPKEPPGFCCRSGKVELNAPVIPNQLMRLWSSSDPDARHFRN 278 Query: 395 NIRSYNHVFSFTSMGVHIDDDLAN 466 NIR +N FSFTS+ +D AN Sbjct: 279 NIRFFNGHFSFTSLYCRLDCATAN 302 >gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group] Length = 1443 Score = 65.5 bits (158), Expect = 4e-09 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +2 Query: 245 CHHCGAKLFPSKTSSLCCLNGQVRXXXXXXXXXXXXXXTSQSADSIHFRENIRSYNHVFS 424 C HCGAK F +T+ CC G+++ +S +D+ HFR+NIR +N FS Sbjct: 80 CKHCGAKKFQYETNGFCCRGGKIKLSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFS 139 Query: 425 FTSMGVHIDDDLAN 466 FT++GV +D+ N Sbjct: 140 FTTLGVSLDERYTN 153