BLASTX nr result

ID: Coptis25_contig00007960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007960
         (1726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
ref|XP_002518741.1| conserved hypothetical protein [Ricinus comm...   384   e-104
gb|ADE76236.1| unknown [Picea sitchensis]                             343   1e-91
ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203...   318   3e-84
ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago ...   315   3e-83

>ref|XP_002298728.1| predicted protein [Populus trichocarpa] gi|222845986|gb|EEE83533.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  411 bits (1057), Expect = e-112
 Identities = 216/396 (54%), Positives = 268/396 (67%), Gaps = 3/396 (0%)
 Frame = -1

Query: 1492 FPIISNLLTSSQIATSMSLLXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXNSYCSSRVPR 1313
            F II + L+  ++ATS+SL                                   S   P 
Sbjct: 39   FRIIRHYLSCQELATSLSLFPISKKRKRTQLREAGSEPTHEDRDLERGSRLGELSRVAPN 98

Query: 1312 QDIDAFKVCFRMSSCTFEWLCGLLEPLLECRDPHGSRLNISAEIRLGIGLFRFATGSDYG 1133
             D  +FK  FRM S TFEWL GLLEPLLECRDP G+ +N+S+E+RLGIGLFR ATGS Y 
Sbjct: 99   PD--SFKTTFRMRSSTFEWLSGLLEPLLECRDPIGTPINLSSELRLGIGLFRLATGSSYI 156

Query: 1132 DIARRFRVSESIARFCTKQLCRVLCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVI 953
            +IA RF V+ES+ RFC KQLCRVLCTNFRFWIAFP + EL+ V+   EG++G  NCCGVI
Sbjct: 157  EIAGRFGVTESVTRFCAKQLCRVLCTNFRFWIAFPTSTELQLVSKDIEGLTGLPNCCGVI 216

Query: 952  GCTRFKVVKGGHC---NEENLGEESVVAQIVVDNSFRILSIVAGFRGGKCDSRVLKCSTL 782
             CTRF VVK   C   +++ + ++S+  QIVVD+S RILSI+AGFRG K DSR+LK +TL
Sbjct: 217  DCTRFNVVKRNDCKLASDDEVQDDSIAVQIVVDSSSRILSIIAGFRGDKNDSRILKSTTL 276

Query: 781  YRDVEEGRLLNGSSIDIEAIAVPQYLVGNEGYPLLPWLMVPFVDPVPASHEDHFNVELTK 602
              D+E  RLLN + + +  +A+ QYL+G+ GYPLLPWLMVPFVD VP S E+ FN     
Sbjct: 277  CHDIEGRRLLNATPVIVNGVAIDQYLIGDGGYPLLPWLMVPFVDVVPGSSEEKFNAANNL 336

Query: 601  MRQPALRTFASLKNWGILNKPIEEEFKTAIACIGACSILHNALLMREDYSALSEEMGDYA 422
            M   ALRT ASLKNWG+LNKP+EEEFKTA+A IGACSILHN LLMRED SAL  ++ DY+
Sbjct: 337  MHVFALRTIASLKNWGVLNKPVEEEFKTAVAFIGACSILHNVLLMREDDSALI-DVEDYS 395

Query: 421  DHDQCSQYCPESSLEENTTVQKASTVRSALARKVQD 314
             +DQ SQ+  ++  EEN T +KAS  R ALA +V +
Sbjct: 396  LYDQDSQFYKDAMTEENLTEKKASDTRRALATRVTE 431


>ref|XP_002518741.1| conserved hypothetical protein [Ricinus communis]
            gi|223542122|gb|EEF43666.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 445

 Score =  384 bits (986), Expect = e-104
 Identities = 205/395 (51%), Positives = 270/395 (68%), Gaps = 4/395 (1%)
 Frame = -1

Query: 1492 FPIISNLLTSSQIATSMSLLXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXNSYCSSRVPR 1313
            FP+I +LL+S + A S+S+L                               S  +  V  
Sbjct: 47   FPLIHHLLSSQETAASLSILNLSKKRKRTHFSEPDSESTHEDKSHGPFHRLSELARVV-- 104

Query: 1312 QDIDAFKVCFRMSSCTFEWLCGLLEPLLECRDPHGSRLNISAEIRLGIGLFRFATGSDYG 1133
            Q+ D+F+  F+M + TFEWL GLLEPLL+CRDP GS L++SAE+RLG+GLFR ATGS+Y 
Sbjct: 105  QNPDSFRTFFKMKASTFEWLSGLLEPLLDCRDPIGSPLSLSAELRLGVGLFRLATGSNYS 164

Query: 1132 DIARRFRVSESIARFCTKQLCRVLCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVI 953
            +IA RF V+ES ARFC KQLCRVLCTNFRFW++FP+  EL+SV+++FE + G  NCCGVI
Sbjct: 165  EIADRFGVTESAARFCAKQLCRVLCTNFRFWVSFPSPVELQSVSNAFEKLIGLPNCCGVI 224

Query: 952  GCTRFKVVKGGHCNEENLGEES---VVAQIVVDNSFRILSIVAGFRGGKCDSRVLKCSTL 782
               RF +VK       + G++    + AQIVVD+S RILSIVAGFRG K +SR+LK +TL
Sbjct: 225  DSARFNLVKKADDKLASNGKDQDDMIAAQIVVDSSSRILSIVAGFRGEKGNSRMLKSTTL 284

Query: 781  YRDVEEGRLLNGSSIDIEAIAVPQYLVGNEGYPLLPWLMVPFVDPVPASHEDHFNVELTK 602
            Y+D+E GR+LN S   +  +A+ +YL+G   YPLLPWLMVPF+D +P S E+ FN     
Sbjct: 285  YKDIEGGRVLNSSPEIVNGVAINRYLIGGGRYPLLPWLMVPFLDALPGSCEEKFNKANDL 344

Query: 601  MRQPALRTFASLKNWGILNKPIEEEFKTAIACIGACSILHNALLMREDYSALSEEMGDYA 422
            MR  +LR  ASLKNWG+L++PI+EEFKTA+A IGACSILHNALLMRED SAL +  G   
Sbjct: 345  MRVSSLRAIASLKNWGVLSRPIQEEFKTAVALIGACSILHNALLMREDDSALLDMGGYSL 404

Query: 421  DHDQCSQYCPESSLEENTTVQ-KASTVRSALARKV 320
             + QCSQ+  ++ +E+ + +  KAS +R+ALA KV
Sbjct: 405  YNQQCSQHFMDAEVEDISRIDGKASEIRNALATKV 439


>gb|ADE76236.1| unknown [Picea sitchensis]
          Length = 368

 Score =  343 bits (879), Expect = 1e-91
 Identities = 177/342 (51%), Positives = 232/342 (67%), Gaps = 4/342 (1%)
 Frame = -1

Query: 1300 AFKVCFRMSSCTFEWLCGLLEPLLECRDPHGSRLNISAEIRLGIGLFRFATGSDYGDIAR 1121
            +FK  FRMS  TFEWLC   EPL+   +      ++    R+G+GLFR ATGS Y  +++
Sbjct: 31   SFKANFRMSPTTFEWLCKQFEPLVTKTN------DVGVFERVGMGLFRLATGSTYQAVSQ 84

Query: 1120 RFRVSESIARFCTKQLCRVLCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVIGCTR 941
            RF  +E  AR CTK+LCRV+CTN +FW+A+P+  +L +V+  F+ +SG  NCCG I CTR
Sbjct: 85   RFVSTEPTARLCTKELCRVICTNLKFWVAYPSPCDLPNVSDEFQTLSGLPNCCGAIDCTR 144

Query: 940  FKVVKGGH---CNEENLG-EESVVAQIVVDNSFRILSIVAGFRGGKCDSRVLKCSTLYRD 773
            FK     +    NEE+   ++SVV QIVVD S RILSI+ GF+G K DSRVL+ STLY D
Sbjct: 145  FKFTNTNYPYIYNEEDDDLQQSVVTQIVVDCSSRILSIITGFKGNKGDSRVLRSSTLYAD 204

Query: 772  VEEGRLLNGSSIDIEAIAVPQYLVGNEGYPLLPWLMVPFVDPVPASHEDHFNVELTKMRQ 593
            +EEGRLLN     ++ + V QYLVG+ GYPLLPWLMVP+ DPV  S ++ FN +   MRQ
Sbjct: 205  IEEGRLLNSPPFHLKGVPVRQYLVGDSGYPLLPWLMVPYTDPVVTSCQEDFNSKHYVMRQ 264

Query: 592  PALRTFASLKNWGILNKPIEEEFKTAIACIGACSILHNALLMREDYSALSEEMGDYADHD 413
             ALRT + L+ WGIL+KPIEE+ + A+ CIGAC+ILHN LL RE  S + E   DYA HD
Sbjct: 265  AALRTLSCLRKWGILSKPIEEDVRVAVGCIGACAILHNILLAREGGSTILEGTEDYALHD 324

Query: 412  QCSQYCPESSLEENTTVQKASTVRSALARKVQDDLNSNQPTS 287
            Q SQY  ++++ E +  +KAS +R+ALA K +D  NS Q  S
Sbjct: 325  QSSQYYRDANMAEYSIEKKASVIRNALAAKARDMRNSEQAIS 366


>ref|XP_004140806.1| PREDICTED: uncharacterized protein LOC101203312 [Cucumis sativus]
            gi|449501700|ref|XP_004161442.1| PREDICTED:
            uncharacterized LOC101203312 [Cucumis sativus]
          Length = 386

 Score =  318 bits (815), Expect = 3e-84
 Identities = 166/330 (50%), Positives = 214/330 (64%)
 Frame = -1

Query: 1303 DAFKVCFRMSSCTFEWLCGLLEPLLECRDPHGSRLNISAEIRLGIGLFRFATGSDYGDIA 1124
            D+F+  FRM+S TFEWL GLLEPLLECRDP GS L++S EIRLG+GL+R ATG D+  I+
Sbjct: 98   DSFRNHFRMTSSTFEWLSGLLEPLLECRDPVGSPLDLSVEIRLGVGLYRLATGCDFSTIS 157

Query: 1123 RRFRVSESIARFCTKQLCRVLCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVIGCT 944
             +F VSES+ARFC+KQLCRVLCTNFRFW+ FP  NELE  +S+FE ++G  NCCG     
Sbjct: 158  DQFGVSESVARFCSKQLCRVLCTNFRFWVEFPCPNELELTSSAFEDLAGLPNCCG----- 212

Query: 943  RFKVVKGGHCNEENLGEESVVAQIVVDNSFRILSIVAGFRGGKCDSRVLKCSTLYRDVEE 764
                                                  FRG K DS VL  STL++D+E+
Sbjct: 213  --------------------------------------FRGNKDDSTVLMSSTLFKDIEQ 234

Query: 763  GRLLNGSSIDIEAIAVPQYLVGNEGYPLLPWLMVPFVDPVPASHEDHFNVELTKMRQPAL 584
            GRLLN   + +  +AV +YL G+  YPLLPWL+VPF   V  S E+ FN     M  PAL
Sbjct: 235  GRLLNSPPVYLHGVAVNKYLFGHGEYPLLPWLIVPFAGAVSGSTEESFNEAHRLMCIPAL 294

Query: 583  RTFASLKNWGILNKPIEEEFKTAIACIGACSILHNALLMREDYSALSEEMGDYADHDQCS 404
            +   SL+NWG+L++PI EEFKTA+A IGACSILHNALLMRED+SA+++E    +  D  S
Sbjct: 295  KAIVSLRNWGVLSQPIHEEFKTAVAYIGACSILHNALLMREDFSAMADEWESLSSLDHKS 354

Query: 403  QYCPESSLEENTTVQKASTVRSALARKVQD 314
            QY  E+ L  ++T +KAS ++ ALA + ++
Sbjct: 355  QYV-EAGLNVDSTNEKASVIQRALALRARE 383


>ref|XP_003607953.1| hypothetical protein MTR_4g085850 [Medicago truncatula]
            gi|355509008|gb|AES90150.1| hypothetical protein
            MTR_4g085850 [Medicago truncatula]
          Length = 399

 Score =  315 bits (806), Expect = 3e-83
 Identities = 163/289 (56%), Positives = 206/289 (71%), Gaps = 3/289 (1%)
 Frame = -1

Query: 1303 DAFKVCFRMSSCTFEWLCGLLEPLLECRDP-HGSRLNISAEIRLGIGLFRFATGSDYGDI 1127
            D F   F M+S TFEWL  LLEPLLECRDP +   LN++A +RLGIGLFR A+GSDY  I
Sbjct: 78   DWFPTTFLMTSSTFEWLTNLLEPLLECRDPAYLLPLNLTAGVRLGIGLFRLASGSDYQQI 137

Query: 1126 ARRFRVSESIARFCTKQLCRVLCTNFRFWIAFPNANELESVASSFEGVSGFSNCCGVIGC 947
            A +F V+ S+A+FC KQLCRVLCTNFRFW++FPNAN+  S+  +FE +SG  NC GV+  
Sbjct: 138  ANQFNVTVSVAKFCVKQLCRVLCTNFRFWVSFPNAND-RSILQNFESISGLPNCSGVVFS 196

Query: 946  TRFKVVKGGHCNEENLGEESVVAQIVVDNSFRILSIVAGFRGGKCDSRVLKCSTLYRDVE 767
            +RF++       + +    S+ AQIVVD++ RILSI AG+ G K D  +LK S+L+ D+E
Sbjct: 197  SRFQIAPSTSPQQPH---SSIAAQIVVDSTCRILSIAAGYFGHKTDYTILKASSLFNDIE 253

Query: 766  EGRLLNGSSIDIEAIAVPQYLVGNEGYPLLPWLMVPFVDP--VPASHEDHFNVELTKMRQ 593
            EG LLN  S++     V QYL+G+ GYPLLPWLMVPF D   V  S E+ FN     MR 
Sbjct: 254  EGSLLNAPSVN----GVNQYLIGDSGYPLLPWLMVPFADNVCVTGSVEETFNAAHGLMRI 309

Query: 592  PALRTFASLKNWGILNKPIEEEFKTAIACIGACSILHNALLMREDYSAL 446
            PA +T ASL+ WG+L+KP+ EE K A+A IGACSILHN+LLMRED+SAL
Sbjct: 310  PAFKTDASLRKWGVLSKPVREEIKMAVAYIGACSILHNSLLMREDFSAL 358


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