BLASTX nr result

ID: Coptis25_contig00007937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007937
         (1718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276691.1| PREDICTED: putative RNA-binding protein Luc7...   492   e-136
emb|CAN71034.1| hypothetical protein VITISV_000356 [Vitis vinifera]   486   e-135
ref|NP_001239802.1| uncharacterized protein LOC100793888 [Glycin...   464   e-128
ref|XP_003534502.1| PREDICTED: putative RNA-binding protein Luc7...   463   e-128
ref|XP_004138908.1| PREDICTED: putative RNA-binding protein Luc7...   463   e-128

>ref|XP_002276691.1| PREDICTED: putative RNA-binding protein Luc7-like 2 [Vitis vinifera]
            gi|297735244|emb|CBI17606.3| unnamed protein product
            [Vitis vinifera]
          Length = 419

 Score =  492 bits (1267), Expect = e-136
 Identities = 261/380 (68%), Positives = 286/380 (75%)
 Frame = +1

Query: 22   MDALRKQLDVLMGANRNGDVTEVNRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGACSKIH 201
            MDA+RKQLDVLMGANRNGDV EVNRKYYDRDVCRLFL GLCPH+LFQLTKMDMG C K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLFLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 202  SLQLRKEYQDAKGKGVHSYDRELEDVIDRLIVECDRKIARALKRLEEADAKAAIAISVSE 381
            SLQLRKEY++AK KGVH+YDR+LEDVIDRLIVECDRKIARALKRLE+ DAKAAIAISVSE
Sbjct: 61   SLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSE 120

Query: 382  VTQTPELLELSKQIKEKLKEVDRLDYEGETDSKIRALEMLEELRTKRADKQSVLLLDAFN 561
            VTQTPE+LELSKQIKEKLKE D+ D EG+TDSKIRALE++EELRTKRADKQS+LLLDAFN
Sbjct: 121  VTQTPEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 562  KDRXXXXXXXXXXXXXXXXXXXXXXXXQTQEMINEKLKKAEFLGEQGMVDEAQXXXXXXX 741
            KDR                        +TQEMINEKLKKAE LGEQGM+DEAQ       
Sbjct: 181  KDR-ASLPQPLPNPPPLAPLPVLAPDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAE 239

Query: 742  XXXXXGARQEGLLDASKYSAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 921
                   RQE +LD+SKY+AADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG
Sbjct: 240  ALKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 299

Query: 922  YMQIRXXXXXXXXXXXXGRKVARSEDDRRSKERKQDHERASSKDQVXXXXXXXXXXXXXX 1101
            YMQIR             RKV R E+DRRSKER +DH+R +SKD+               
Sbjct: 300  YMQIREKLAELQEERNKSRKVDRHENDRRSKERSRDHDREASKDRA--------DSRERG 351

Query: 1102 XXXXXXXXXXXXYHDRDHGY 1161
                        YHDRD G+
Sbjct: 352  RDHDRRSRDRDRYHDRDRGH 371


>emb|CAN71034.1| hypothetical protein VITISV_000356 [Vitis vinifera]
          Length = 419

 Score =  486 bits (1251), Expect = e-135
 Identities = 259/380 (68%), Positives = 284/380 (74%)
 Frame = +1

Query: 22   MDALRKQLDVLMGANRNGDVTEVNRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGACSKIH 201
            MDA+RKQLDVLMGANRNGDV EVNRKYYDRDVCRLFL GLCPH+LFQLTKMDMG C K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLFLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 202  SLQLRKEYQDAKGKGVHSYDRELEDVIDRLIVECDRKIARALKRLEEADAKAAIAISVSE 381
            SLQLRKEY++AK KGVH+YDR+LEDVIDRLIVECDRKIARALKRLE+ DAKAAIAISVSE
Sbjct: 61   SLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSE 120

Query: 382  VTQTPELLELSKQIKEKLKEVDRLDYEGETDSKIRALEMLEELRTKRADKQSVLLLDAFN 561
            VTQT E+LELSKQIKEKLKE D+ D EG+TDSKIRALE++EELRTKRADKQS+LLLDAFN
Sbjct: 121  VTQTAEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 562  KDRXXXXXXXXXXXXXXXXXXXXXXXXQTQEMINEKLKKAEFLGEQGMVDEAQXXXXXXX 741
            KDR                        +TQEMINEKLKKAE LGEQGM+DEAQ       
Sbjct: 181  KDR-ASLPQPLPNPPPLAPLPVLSPDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAE 239

Query: 742  XXXXXGARQEGLLDASKYSAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 921
                   RQE +LD+SKY+AADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG
Sbjct: 240  ALKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 299

Query: 922  YMQIRXXXXXXXXXXXXGRKVARSEDDRRSKERKQDHERASSKDQVXXXXXXXXXXXXXX 1101
            YMQIR             RKV R E+DRRSKER +D +R +SKD+               
Sbjct: 300  YMQIREKLAELQEERNKSRKVDRHENDRRSKERSRDRDREASKDRA--------DSRERG 351

Query: 1102 XXXXXXXXXXXXYHDRDHGY 1161
                        YHDRD G+
Sbjct: 352  RDHDRRSRDRDRYHDRDRGH 371


>ref|NP_001239802.1| uncharacterized protein LOC100793888 [Glycine max]
            gi|255636477|gb|ACU18577.1| unknown [Glycine max]
          Length = 414

 Score =  464 bits (1195), Expect = e-128
 Identities = 247/344 (71%), Positives = 270/344 (78%)
 Frame = +1

Query: 22   MDALRKQLDVLMGANRNGDVTEVNRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGACSKIH 201
            MDA+RKQLDVLMGANRNGDV EVNRKYYDRDVCRL+L GLCPH+LFQLTKMDMG C K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 202  SLQLRKEYQDAKGKGVHSYDRELEDVIDRLIVECDRKIARALKRLEEADAKAAIAISVSE 381
            SLQLRKEY++AK KG  +YDRELEDVID+LI ECDRKI RALKRLE+ DAKAAIAISVSE
Sbjct: 61   SLQLRKEYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSE 120

Query: 382  VTQTPELLELSKQIKEKLKEVDRLDYEGETDSKIRALEMLEELRTKRADKQSVLLLDAFN 561
            VTQT E+LELSKQIKEKLKE D+ D EG++D KIRALE++EELRTKRADKQS+LLLDAFN
Sbjct: 121  VTQTDEVLELSKQIKEKLKEADQYDLEGKSDLKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 562  KDRXXXXXXXXXXXXXXXXXXXXXXXXQTQEMINEKLKKAEFLGEQGMVDEAQXXXXXXX 741
            KDR                        +TQEMINEKLKKAE LGEQGMVDEAQ       
Sbjct: 181  KDR-ASLPTPLPNPPPLAPLPVVAPDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAE 239

Query: 742  XXXXXGARQEGLLDASKYSAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 921
                  ARQE +LD+SKY+AADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG
Sbjct: 240  ALKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 299

Query: 922  YMQIRXXXXXXXXXXXXGRKVARSEDDRRSKERKQDHERASSKD 1053
            YMQIR             RK  R  DDRRSKER +D +R SS+D
Sbjct: 300  YMQIREKLAELQEERNKSRKTDRL-DDRRSKERSRDRDRESSRD 342


>ref|XP_003534502.1| PREDICTED: putative RNA-binding protein Luc7-like 2-like [Glycine
            max]
          Length = 414

 Score =  463 bits (1192), Expect = e-128
 Identities = 246/345 (71%), Positives = 270/345 (78%)
 Frame = +1

Query: 22   MDALRKQLDVLMGANRNGDVTEVNRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGACSKIH 201
            MDA+RKQLDVLMGANRNGDV EVNRKYYDRDVCRL+L GLCPH+LFQLTKMDMG C K+H
Sbjct: 1    MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 202  SLQLRKEYQDAKGKGVHSYDRELEDVIDRLIVECDRKIARALKRLEEADAKAAIAISVSE 381
            SLQLRKEY++AK KG  +YDRELEDVID+LI ECDRKI RALKRLE+ DAKAAIAISVSE
Sbjct: 61   SLQLRKEYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSE 120

Query: 382  VTQTPELLELSKQIKEKLKEVDRLDYEGETDSKIRALEMLEELRTKRADKQSVLLLDAFN 561
            VTQT E+LELSKQIKEKLKE D+ D EG++D KIRALE++EELRTKRADKQS+LLLDAFN
Sbjct: 121  VTQTDEVLELSKQIKEKLKEADQYDLEGKSDLKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 562  KDRXXXXXXXXXXXXXXXXXXXXXXXXQTQEMINEKLKKAEFLGEQGMVDEAQXXXXXXX 741
            KDR                        +TQEMINEKLKKAE LGEQGMVDEAQ       
Sbjct: 181  KDR-ASLPTPLPNPPPLAPLPVVAPDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAE 239

Query: 742  XXXXXGARQEGLLDASKYSAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 921
                  ARQE +LD+SKY+A DVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG
Sbjct: 240  ALKKLPARQEPVLDSSKYTAVDVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 299

Query: 922  YMQIRXXXXXXXXXXXXGRKVARSEDDRRSKERKQDHERASSKDQ 1056
            YMQIR             RK  R  DDRRSKER +D +R SS+D+
Sbjct: 300  YMQIREKLAELQEERNKSRKTDRL-DDRRSKERSRDRDRESSRDR 343


>ref|XP_004138908.1| PREDICTED: putative RNA-binding protein Luc7-like 2-like [Cucumis
            sativus] gi|449506274|ref|XP_004162701.1| PREDICTED:
            putative RNA-binding protein Luc7-like 2-like [Cucumis
            sativus]
          Length = 413

 Score =  463 bits (1191), Expect = e-128
 Identities = 242/345 (70%), Positives = 271/345 (78%)
 Frame = +1

Query: 22   MDALRKQLDVLMGANRNGDVTEVNRKYYDRDVCRLFLAGLCPHDLFQLTKMDMGACSKIH 201
            MDA R+QLD LMGANRNGDV EV+RKYYDRDVCR+FL GLCPH+LFQLTKMDMG C KIH
Sbjct: 1    MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60

Query: 202  SLQLRKEYQDAKGKGVHSYDRELEDVIDRLIVECDRKIARALKRLEEADAKAAIAISVSE 381
            SLQLRKEY++ K KG+H+YDR+LEDVIDRLI+ECDRKIARALKRLEE DAKAAIAISVSE
Sbjct: 61   SLQLRKEYEEGKAKGIHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120

Query: 382  VTQTPELLELSKQIKEKLKEVDRLDYEGETDSKIRALEMLEELRTKRADKQSVLLLDAFN 561
            VTQ PE+LELSK+IKEKLKE D+ D EG+TD KIR LE++EELRT+RADKQS+LLLDAFN
Sbjct: 121  VTQIPEVLELSKEIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTRRADKQSMLLLDAFN 180

Query: 562  KDRXXXXXXXXXXXXXXXXXXXXXXXXQTQEMINEKLKKAEFLGEQGMVDEAQXXXXXXX 741
            KDR                        +TQEMINEKLKKAE LGEQGM+DEAQ       
Sbjct: 181  KDR-ASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAE 239

Query: 742  XXXXXGARQEGLLDASKYSAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 921
                  ARQE ++D+SKY+AADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG
Sbjct: 240  ALKKLPARQEPVVDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLG 299

Query: 922  YMQIRXXXXXXXXXXXXGRKVARSEDDRRSKERKQDHERASSKDQ 1056
            YMQIR             RKV R  DDRRSKER ++ +R  S+D+
Sbjct: 300  YMQIREKLAELQEERNKSRKVDR-HDDRRSKERSREPDREPSRDR 343


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