BLASTX nr result

ID: Coptis25_contig00007935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007935
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08680.1| histone H2A [Hyacinthus orientalis]                    140   2e-31
gb|AAT08677.1| histone H2A [Hyacinthus orientalis]                    140   2e-31
ref|XP_002462725.1| hypothetical protein SORBIDRAFT_02g030950 [S...   140   4e-31
ref|XP_004149043.1| PREDICTED: histone H2A-like [Cucumis sativus...   139   9e-31
ref|XP_002465460.1| hypothetical protein SORBIDRAFT_01g039250 [S...   139   9e-31

>gb|AAT08680.1| histone H2A [Hyacinthus orientalis]
          Length = 152

 Score =  140 bits (354), Expect = 2e-31
 Identities = 73/101 (72%), Positives = 77/101 (76%)
 Frame = +3

Query: 171 SVSRSVKAGLQFPVGRLARFLKVGRYAKRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDN 350
           SVSRSVKAGLQFPVGRL R+LK GRYA+RVGTGAP                  GNAARDN
Sbjct: 23  SVSRSVKAGLQFPVGRLGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 82

Query: 351 KKRTINPRHILLAIRNDEELGKLLAHVTIAHGGVLPNINPV 473
           KK  I PRH+LLA+RNDEELGKLLA VTIAHGGVLPNINPV
Sbjct: 83  KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPV 123


>gb|AAT08677.1| histone H2A [Hyacinthus orientalis]
          Length = 152

 Score =  140 bits (354), Expect = 2e-31
 Identities = 73/101 (72%), Positives = 77/101 (76%)
 Frame = +3

Query: 171 SVSRSVKAGLQFPVGRLARFLKVGRYAKRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDN 350
           SVSRSVKAGLQFPVGRL R+LK GRYA+RVGTGAP                  GNAARDN
Sbjct: 23  SVSRSVKAGLQFPVGRLGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 82

Query: 351 KKRTINPRHILLAIRNDEELGKLLAHVTIAHGGVLPNINPV 473
           KK  I PRH+LLA+RNDEELGKLLA VTIAHGGVLPNINPV
Sbjct: 83  KKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPV 123


>ref|XP_002462725.1| hypothetical protein SORBIDRAFT_02g030950 [Sorghum bicolor]
           gi|241926102|gb|EER99246.1| hypothetical protein
           SORBIDRAFT_02g030950 [Sorghum bicolor]
          Length = 157

 Score =  140 bits (352), Expect = 4e-31
 Identities = 73/101 (72%), Positives = 77/101 (76%)
 Frame = +3

Query: 171 SVSRSVKAGLQFPVGRLARFLKVGRYAKRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDN 350
           SVSRSVKAGLQFPVGR+ R+LK GRYA+RVGTGAP                  GNAARDN
Sbjct: 26  SVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 85

Query: 351 KKRTINPRHILLAIRNDEELGKLLAHVTIAHGGVLPNINPV 473
           KK  I PRH+LLAIRNDEELGKLLA VTIAHGGVLPNINPV
Sbjct: 86  KKTRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 126


>ref|XP_004149043.1| PREDICTED: histone H2A-like [Cucumis sativus]
           gi|449530538|ref|XP_004172251.1| PREDICTED: histone
           H2A-like [Cucumis sativus]
          Length = 153

 Score =  139 bits (349), Expect = 9e-31
 Identities = 72/100 (72%), Positives = 76/100 (76%)
 Frame = +3

Query: 174 VSRSVKAGLQFPVGRLARFLKVGRYAKRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 353
           VSRSVKAGLQFPVGR+ R+LK GRYA+RVGTGAP                  GNAARDNK
Sbjct: 24  VSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 354 KRTINPRHILLAIRNDEELGKLLAHVTIAHGGVLPNINPV 473
           K  I PRH+LLAIRNDEELGKLLA VTIAHGGVLPNINPV
Sbjct: 84  KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 123


>ref|XP_002465460.1| hypothetical protein SORBIDRAFT_01g039250 [Sorghum bicolor]
           gi|241919314|gb|EER92458.1| hypothetical protein
           SORBIDRAFT_01g039250 [Sorghum bicolor]
          Length = 160

 Score =  139 bits (349), Expect = 9e-31
 Identities = 72/101 (71%), Positives = 77/101 (76%)
 Frame = +3

Query: 171 SVSRSVKAGLQFPVGRLARFLKVGRYAKRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDN 350
           SVSRSVKAGLQFPVGR+ R+LK GRYA+RVGTGAP                  GNAARDN
Sbjct: 29  SVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 88

Query: 351 KKRTINPRHILLAIRNDEELGKLLAHVTIAHGGVLPNINPV 473
           KK  I PRH+LLAIRNDEELGKLL+ VTIAHGGVLPNINPV
Sbjct: 89  KKTRIIPRHVLLAIRNDEELGKLLSGVTIAHGGVLPNINPV 129


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