BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007934
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    75   7e-12
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    74   1e-11
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    71   1e-10
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    68   7e-10
ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...    67   2e-09

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = -1

Query: 368 VSQVHMYTLGCPNWIKMTCKAPEALQSTIERVSVFLHGRHHWLTVDERSLTDGPLIVSFD 189
           +SQV + TLGCP W  +   +   ++   E +   ++GR HW++   R+      +VSFD
Sbjct: 204 LSQVQILTLGCPGWRSLGKVSYRLVRRASETL---VNGRLHWVSRPCRN-KPARRLVSFD 259

Query: 188 LGVEDFGSVPTPDSHLFKYSFEC-YYVGVLEGNLSAVECSSESYIHVWVMKKYNIKESWV 12
           L  E F  VP PD         C Y++ VL G LS     +   + +WVMK+YN+KESWV
Sbjct: 260 LTDEQFREVPKPDCGGLN---RCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESWV 316

Query: 11  KQF 3
           K++
Sbjct: 317 KEY 319


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 47/122 (38%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = -1

Query: 365 SQVHMYTLGCPNWIKMTCKAPEALQSTIERVSVFLHGRHHWLTVDERSLTDGPLIVSFDL 186
           S+V + TLG P W  +      + Q         ++GR HW+T   R +T    IVSFDL
Sbjct: 206 SEVQVLTLGSPTWRSL---GKVSYQLDRWPSEALVNGRLHWVTRPRRYVTR--FIVSFDL 260

Query: 185 GVEDFGSVPTPDSHLFKYSFEC-YYVGVLEGNLSAVECSSESYIHVWVMKKYNIKESWVK 9
             E F  +P PD         C Y++ VL G LSA    S   + VWVMK+Y++KESW+K
Sbjct: 261 ADEQFREIPKPDCGGLS---RCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESWIK 317

Query: 8   QF 3
           +F
Sbjct: 318 EF 319


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
 Frame = -1

Query: 368 VSQVHMYTLGCPNWIKMTCKAPEALQSTIERVS-VFLHGRHHWLTVDERSLTDGPLIVSF 192
           +S+V + TLGCP W  +     +     + R S   ++GR HW++   R+      +VSF
Sbjct: 205 LSEVQILTLGCPEWRSLG----KVSYRLVRRASGALVNGRLHWISRPCRN-KPARRLVSF 259

Query: 191 DLGVEDFGSVPTPDSHLFKYSFEC-YYVGVLEGNLSAVECSSESYIHVWVMKKYNIKESW 15
           DL  E F  V  PD         C Y++ VL G LSA    +   + +WVMK+YN+KESW
Sbjct: 260 DLTDEQFREVSKPDCGGLN---RCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKESW 316

Query: 14  VKQF 3
           VK++
Sbjct: 317 VKEY 320


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = -1

Query: 365 SQVHMYTLGCPNWIKMTCKAPEALQSTIERVSVFLHGRHHWLTVDERSLTDGPLIVSFDL 186
           S+V ++TLG  NW  +        Q    +    ++GR HW+++  R    G  IVSFDL
Sbjct: 171 SEVQVFTLGTSNWRSIGRIFHHLAQG---QSPAAINGRLHWVSLPRRHYV-GRTIVSFDL 226

Query: 185 GVEDFGSVPTPD-SHLFKYSFECYYVGVLEGNLSAVECSSESYIHVWVMKKYNIKESWVK 9
             E+F  +P PD   L + +F+      L   LSAV   S   + +WVM++Y +KESWVK
Sbjct: 227 ASEEFIDIPKPDYGSLSRCNFQLMN---LNDCLSAVVYCSYGKMEIWVMEQYGVKESWVK 283

Query: 8   QF 3
            F
Sbjct: 284 SF 285


>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
           gi|223525141|gb|EEF27869.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 383

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 42/121 (34%), Positives = 62/121 (51%)
 Frame = -1

Query: 365 SQVHMYTLGCPNWIKMTCKAPEALQSTIERVSVFLHGRHHWLTVDERSLTDGPLIVSFDL 186
           S+V + T+G P+W  +       + S  +   V+++GR HW+    R    G  ++SFDL
Sbjct: 187 SEVQILTVGSPSWRSLGETPYYPIHSPSQ---VYVNGRLHWVNWPVR-YRPGRKLISFDL 242

Query: 185 GVEDFGSVPTPDSHLFKYSFECYYVGVLEGNLSAVECSSESYIHVWVMKKYNIKESWVKQ 6
             E F  VP P S   K+    Y + V+   LSA    +     VWVMK Y +KESW+K+
Sbjct: 243 EDEKFREVPLPGSDGIKWGD--YMLVVIRDCLSAAVYRNYGSFEVWVMKDYGLKESWIKE 300

Query: 5   F 3
           F
Sbjct: 301 F 301