BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007930
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514955.1| NADH-ubiquinone oxidoreductase flavoprotein,...    58   4e-11
ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-11
emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera]    58   1e-10
ref|XP_002266661.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...    58   1e-10
ref|XP_003589961.1| NADH-quinone oxidoreductase subunit F [Medic...    56   2e-10

>ref|XP_002514955.1| NADH-ubiquinone oxidoreductase flavoprotein, putative [Ricinus
           communis] gi|223546006|gb|EEF47509.1| NADH-ubiquinone
           oxidoreductase flavoprotein, putative [Ricinus communis]
          Length = 486

 Score = 57.8 bits (138), Expect(2) = 4e-11
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = +2

Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457
           KQIE HTI    D   WPVQ LIRHF P+LE+RIKE A+++LL+  A
Sbjct: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERELLEAAA 486



 Score = 34.7 bits (78), Expect(2) = 4e-11
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +3

Query: 249 IERLNVENAKLAEIDMLQEVT 311
           +ERL V NAKL EIDMLQEVT
Sbjct: 419 MERLKVGNAKLEEIDMLQEVT 439


>ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|222864662|gb|EEF01793.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 57.8 bits (138), Expect(2) = 4e-11
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = +2

Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457
           KQIE HTI    D   WPVQ LIRHF P+LE+RIKE A+++LL+  A
Sbjct: 439 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERELLEAAA 485



 Score = 34.7 bits (78), Expect(2) = 4e-11
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +3

Query: 249 IERLNVENAKLAEIDMLQEVT 311
           +ERL V NAKL EIDMLQEVT
Sbjct: 418 MERLKVGNAKLEEIDMLQEVT 438


>emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera]
          Length = 489

 Score = 58.2 bits (139), Expect(2) = 1e-10
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +2

Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457
           KQIE HTI    D   WPVQ LIRHF P+LE+RI+E A+++LL+V A
Sbjct: 442 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLEVAA 488



 Score = 32.7 bits (73), Expect(2) = 1e-10
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 249 IERLNVENAKLAEIDMLQEVT 311
           +ERL V NA L EIDMLQEVT
Sbjct: 421 MERLKVGNANLEEIDMLQEVT 441


>ref|XP_002266661.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1,
           mitochondrial-like [Vitis vinifera]
          Length = 487

 Score = 58.2 bits (139), Expect(2) = 1e-10
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +2

Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457
           KQIE HTI    D   WPVQ LIRHF P+LE+RI+E A+++LL+V A
Sbjct: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLEVAA 486



 Score = 32.7 bits (73), Expect(2) = 1e-10
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 249 IERLNVENAKLAEIDMLQEVT 311
           +ERL V NA L EIDMLQEVT
Sbjct: 419 MERLKVGNANLEEIDMLQEVT 439


>ref|XP_003589961.1| NADH-quinone oxidoreductase subunit F [Medicago truncatula]
           gi|355479009|gb|AES60212.1| NADH-quinone oxidoreductase
           subunit F [Medicago truncatula]
          Length = 568

 Score = 55.8 bits (133), Expect(2) = 2e-10
 Identities = 32/66 (48%), Positives = 38/66 (57%)
 Frame = +2

Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVARVLHQGIYLSDGY 496
           KQIE HTI    D   WPVQ LIRHF P+LE+RIKE A ++LL     V      L    
Sbjct: 444 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKENAQRELLQATGVV----TVLMIAK 499

Query: 497 CRIKEC 514
            +IK+C
Sbjct: 500 IKIKQC 505



 Score = 33.9 bits (76), Expect(2) = 2e-10
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 249 IERLNVENAKLAEIDMLQEVT 311
           +ER+ V NAKL EIDMLQEVT
Sbjct: 423 MERMKVGNAKLEEIDMLQEVT 443