BLASTX nr result
ID: Coptis25_contig00007930
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007930 (521 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514955.1| NADH-ubiquinone oxidoreductase flavoprotein,... 58 4e-11 ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|2... 58 4e-11 emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera] 58 1e-10 ref|XP_002266661.1| PREDICTED: NADH dehydrogenase [ubiquinone] f... 58 1e-10 ref|XP_003589961.1| NADH-quinone oxidoreductase subunit F [Medic... 56 2e-10 >ref|XP_002514955.1| NADH-ubiquinone oxidoreductase flavoprotein, putative [Ricinus communis] gi|223546006|gb|EEF47509.1| NADH-ubiquinone oxidoreductase flavoprotein, putative [Ricinus communis] Length = 486 Score = 57.8 bits (138), Expect(2) = 4e-11 Identities = 28/47 (59%), Positives = 34/47 (72%) Frame = +2 Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457 KQIE HTI D WPVQ LIRHF P+LE+RIKE A+++LL+ A Sbjct: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERELLEAAA 486 Score = 34.7 bits (78), Expect(2) = 4e-11 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = +3 Query: 249 IERLNVENAKLAEIDMLQEVT 311 +ERL V NAKL EIDMLQEVT Sbjct: 419 MERLKVGNAKLEEIDMLQEVT 439 >ref|XP_002315622.1| predicted protein [Populus trichocarpa] gi|222864662|gb|EEF01793.1| predicted protein [Populus trichocarpa] Length = 485 Score = 57.8 bits (138), Expect(2) = 4e-11 Identities = 28/47 (59%), Positives = 34/47 (72%) Frame = +2 Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457 KQIE HTI D WPVQ LIRHF P+LE+RIKE A+++LL+ A Sbjct: 439 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKERAERELLEAAA 485 Score = 34.7 bits (78), Expect(2) = 4e-11 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = +3 Query: 249 IERLNVENAKLAEIDMLQEVT 311 +ERL V NAKL EIDMLQEVT Sbjct: 418 MERLKVGNAKLEEIDMLQEVT 438 >emb|CAN73193.1| hypothetical protein VITISV_022287 [Vitis vinifera] Length = 489 Score = 58.2 bits (139), Expect(2) = 1e-10 Identities = 28/47 (59%), Positives = 35/47 (74%) Frame = +2 Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457 KQIE HTI D WPVQ LIRHF P+LE+RI+E A+++LL+V A Sbjct: 442 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLEVAA 488 Score = 32.7 bits (73), Expect(2) = 1e-10 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = +3 Query: 249 IERLNVENAKLAEIDMLQEVT 311 +ERL V NA L EIDMLQEVT Sbjct: 421 MERLKVGNANLEEIDMLQEVT 441 >ref|XP_002266661.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [Vitis vinifera] Length = 487 Score = 58.2 bits (139), Expect(2) = 1e-10 Identities = 28/47 (59%), Positives = 35/47 (74%) Frame = +2 Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVA 457 KQIE HTI D WPVQ LIRHF P+LE+RI+E A+++LL+V A Sbjct: 440 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRERAERELLEVAA 486 Score = 32.7 bits (73), Expect(2) = 1e-10 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = +3 Query: 249 IERLNVENAKLAEIDMLQEVT 311 +ERL V NA L EIDMLQEVT Sbjct: 419 MERLKVGNANLEEIDMLQEVT 439 >ref|XP_003589961.1| NADH-quinone oxidoreductase subunit F [Medicago truncatula] gi|355479009|gb|AES60212.1| NADH-quinone oxidoreductase subunit F [Medicago truncatula] Length = 568 Score = 55.8 bits (133), Expect(2) = 2e-10 Identities = 32/66 (48%), Positives = 38/66 (57%) Frame = +2 Query: 317 KQIEEHTI*T*DDVVVWPVQCLIRHFIPQLEKRIKECADKKLLDVVARVLHQGIYLSDGY 496 KQIE HTI D WPVQ LIRHF P+LE+RIKE A ++LL V L Sbjct: 444 KQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKENAQRELLQATGVV----TVLMIAK 499 Query: 497 CRIKEC 514 +IK+C Sbjct: 500 IKIKQC 505 Score = 33.9 bits (76), Expect(2) = 2e-10 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = +3 Query: 249 IERLNVENAKLAEIDMLQEVT 311 +ER+ V NAKL EIDMLQEVT Sbjct: 423 MERMKVGNAKLEEIDMLQEVT 443