BLASTX nr result
ID: Coptis25_contig00007920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007920 (345 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like... 71 1e-10 ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like... 71 1e-10 ref|XP_003593554.1| Splicing factor 3B subunit [Medicago truncat... 68 9e-10 ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like... 67 2e-09 ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like... 65 8e-09 >ref|XP_003545890.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 575 Score = 70.9 bits (172), Expect = 1e-10 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = +2 Query: 179 AKENADPQQFVENVEIEYVAEKADLEGSSYEEFAKVFEKFTFTVTSALEDEEKKD 343 AKEN D +Q VE +EIEYV EKA+L EEF K+FEKFTFT +ALED +KKD Sbjct: 59 AKENDDSKQLVEQIEIEYVPEKAELVEGMDEEFRKIFEKFTFTDATALEDTDKKD 113 >ref|XP_003543065.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 575 Score = 70.9 bits (172), Expect = 1e-10 Identities = 35/55 (63%), Positives = 41/55 (74%) Frame = +2 Query: 179 AKENADPQQFVENVEIEYVAEKADLEGSSYEEFAKVFEKFTFTVTSALEDEEKKD 343 AKEN D +Q VE +EIEYV EKA+L EEF K+FEKFTFT +ALED +KKD Sbjct: 59 AKENNDSKQLVEQIEIEYVPEKAELVEGMDEEFRKIFEKFTFTDATALEDTDKKD 113 >ref|XP_003593554.1| Splicing factor 3B subunit [Medicago truncatula] gi|355482602|gb|AES63805.1| Splicing factor 3B subunit [Medicago truncatula] Length = 578 Score = 67.8 bits (164), Expect = 9e-10 Identities = 33/55 (60%), Positives = 39/55 (70%) Frame = +2 Query: 179 AKENADPQQFVENVEIEYVAEKADLEGSSYEEFAKVFEKFTFTVTSALEDEEKKD 343 AKEN DP+Q E VEIEYV EK DL EEF K+FEKF+FT +A E+ +KKD Sbjct: 50 AKENTDPKQVFEQVEIEYVPEKVDLYEGMDEEFRKIFEKFSFTEVAASEETDKKD 104 >ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max] Length = 577 Score = 66.6 bits (161), Expect = 2e-09 Identities = 32/55 (58%), Positives = 39/55 (70%) Frame = +2 Query: 179 AKENADPQQFVENVEIEYVAEKADLEGSSYEEFAKVFEKFTFTVTSALEDEEKKD 343 A EN DPQQ VE VEIEYV E+A+L+ EEF K+FEKF+F + ED +KKD Sbjct: 60 ATENTDPQQVVEQVEIEYVPERAELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKD 114 >ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus] gi|449515207|ref|XP_004164641.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus] Length = 580 Score = 64.7 bits (156), Expect = 8e-09 Identities = 31/54 (57%), Positives = 39/54 (72%) Frame = +2 Query: 182 KENADPQQFVENVEIEYVAEKADLEGSSYEEFAKVFEKFTFTVTSALEDEEKKD 343 KEN DP Q VE VEIEY+ EKA+L+ S E+F KVFEKF+F+ + E+ E KD Sbjct: 69 KENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENEDKD 122