BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007917
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284772.1| PREDICTED: ribulose-phosphate 3-epimerase, c...   452   e-124
ref|NP_200949.1| D-ribulose-5-phosphate-3-epimerase [Arabidopsis...   449   e-124
ref|XP_004137418.1| PREDICTED: ribulose-phosphate 3-epimerase, c...   447   e-123
ref|XP_002866432.1| hypothetical protein ARALYDRAFT_919384 [Arab...   447   e-123
gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expr...   446   e-123

>ref|XP_002284772.1| PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic-like [Vitis
            vinifera]
          Length = 282

 Score =  452 bits (1162), Expect = e-124
 Identities = 228/245 (93%), Positives = 236/245 (96%)
 Frame = -3

Query: 1035 RRKYRMEVKASSRVDNFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF 856
            RRK+   VKAS+RVD FSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF
Sbjct: 38   RRKFSSTVKASARVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF 97

Query: 855  VPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQASTIHLHR 676
            VPNITIGPL+V ALRPVTDLPLDVHLMIVEP+QRVPDFIKAGADIVSVHCEQ+STIHLHR
Sbjct: 98   VPNITIGPLIVGALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHR 157

Query: 675  TINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDLVLIMSVNPGFGGQSFIESQVKKISDL 496
            TINQIKSLGAKAGVVLNP TPL+TIEYVLD VDLVLIMSVNPGFGGQSFIESQVKKISDL
Sbjct: 158  TINQIKSLGAKAGVVLNPATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 217

Query: 495  RRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKKP 316
            RR+C EKGVNPWIEVDGGVGP NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK+P
Sbjct: 218  RRICAEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 277

Query: 315  VAVAV 301
            VAVAV
Sbjct: 278  VAVAV 282


>ref|NP_200949.1| D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
            gi|30697525|ref|NP_851240.1|
            D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
            gi|4102703|gb|AAD09954.1|
            ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
            gi|9757862|dbj|BAB08496.1|
            ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
            gi|15027997|gb|AAK76529.1| putative
            ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
            gi|20259209|gb|AAM14320.1| putative
            ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
            gi|332010080|gb|AED97463.1|
            D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
            gi|332010081|gb|AED97464.1|
            D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
          Length = 281

 Score =  449 bits (1154), Expect = e-124
 Identities = 231/267 (86%), Positives = 238/267 (89%)
 Frame = -3

Query: 1101 INGFGXXXXXXXXXXXXXXXXSRRKYRMEVKASSRVDNFSKSDIIVSPSILSANFAKLGE 922
            +NGFG                SRR+    VKASSRVD FSKSDIIVSPSILSANFAKLGE
Sbjct: 15   VNGFGLRPERSLLYQPTSFSFSRRRTHGIVKASSRVDRFSKSDIIVSPSILSANFAKLGE 74

Query: 921  QVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPDF 742
            QVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEP+QRVPDF
Sbjct: 75   QVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDF 134

Query: 741  IKAGADIVSVHCEQASTIHLHRTINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDLVLIM 562
            IKAGADIVSVHCEQ STIHLHRT+NQIKSLGAKAGVVLNPGTPL+ IEYVLD VDLVLIM
Sbjct: 135  IKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLSAIEYVLDMVDLVLIM 194

Query: 561  SVNPGFGGQSFIESQVKKISDLRRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 382
            SVNPGFGGQSFIESQVKKISDLR+MC EKGVNPWIEVDGGV P NAYKVIEAGANALVAG
Sbjct: 195  SVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAG 254

Query: 381  SAVFGAKDYAEAIKGIKTSKKPVAVAV 301
            SAVFGAKDYAEAIKGIK SK+P AVAV
Sbjct: 255  SAVFGAKDYAEAIKGIKASKRPAAVAV 281


>ref|XP_004137418.1| PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic-like
            [Cucumis sativus] gi|449486996|ref|XP_004157465.1|
            PREDICTED: ribulose-phosphate 3-epimerase,
            chloroplastic-like [Cucumis sativus]
          Length = 283

 Score =  447 bits (1149), Expect = e-123
 Identities = 225/245 (91%), Positives = 235/245 (95%)
 Frame = -3

Query: 1035 RRKYRMEVKASSRVDNFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF 856
            RR++R  VKAS+RVD FSKSDIIVSPSILSANF+KLGEQVKAVELAGCDWIHVDVMDGRF
Sbjct: 39   RRRFRNVVKASARVDKFSKSDIIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRF 98

Query: 855  VPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQASTIHLHR 676
            VPNITIGPLVVDALRPVTDLPLDVHLMIVEP+QRVPDFIKAGADIVSVHCEQ+STIHLHR
Sbjct: 99   VPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHR 158

Query: 675  TINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDLVLIMSVNPGFGGQSFIESQVKKISDL 496
            T+NQIKSLGAKAGVVLNP T L+TIEYVLD VDLVLIMSVNPGFGGQSFIESQVKKISDL
Sbjct: 159  TVNQIKSLGAKAGVVLNPATSLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 218

Query: 495  RRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKKP 316
            RR+C EKGVNPWIEVDGGVGP NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSK+P
Sbjct: 219  RRLCAEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRP 278

Query: 315  VAVAV 301
             AV V
Sbjct: 279  EAVPV 283


>ref|XP_002866432.1| hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp.
            lyrata] gi|297312267|gb|EFH42691.1| hypothetical protein
            ARALYDRAFT_919384 [Arabidopsis lyrata subsp. lyrata]
          Length = 281

 Score =  447 bits (1149), Expect = e-123
 Identities = 230/267 (86%), Positives = 238/267 (89%)
 Frame = -3

Query: 1101 INGFGXXXXXXXXXXXXXXXXSRRKYRMEVKASSRVDNFSKSDIIVSPSILSANFAKLGE 922
            +NGFG                SRR+    VKAS+RVD FSKSDIIVSPSILSANFAKLGE
Sbjct: 15   VNGFGLRPERSLLYQPTSFFFSRRRSHGIVKASARVDKFSKSDIIVSPSILSANFAKLGE 74

Query: 921  QVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPDF 742
            QVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEP+QRVPDF
Sbjct: 75   QVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDF 134

Query: 741  IKAGADIVSVHCEQASTIHLHRTINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDLVLIM 562
            IKAGADIVSVHCEQ STIHLHRT+NQIKSLGAKAGVVLNPGTPL+ IEYVLD VDLVLIM
Sbjct: 135  IKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVLIM 194

Query: 561  SVNPGFGGQSFIESQVKKISDLRRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAG 382
            SVNPGFGGQSFIESQVKKISDLR+MC EKGVNPWIEVDGGV P NAYKVIEAGANALVAG
Sbjct: 195  SVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAG 254

Query: 381  SAVFGAKDYAEAIKGIKTSKKPVAVAV 301
            SAVFGAKDYAEAIKGIK SK+P AVAV
Sbjct: 255  SAVFGAKDYAEAIKGIKASKRPEAVAV 281


>gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expression vector
            pFL505]
          Length = 285

 Score =  446 bits (1148), Expect = e-123
 Identities = 227/245 (92%), Positives = 234/245 (95%)
 Frame = -3

Query: 1035 RRKYRMEVKASSRVDNFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF 856
            RRK +  VKA+SRVD FSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF
Sbjct: 41   RRKVQTLVKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF 100

Query: 855  VPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQASTIHLHR 676
            VPNITIGPLVVDALRPVTDLPLDVHLMIVEP+QRVPDFIKAGADIVSVHCE ASTIHLHR
Sbjct: 101  VPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHR 160

Query: 675  TINQIKSLGAKAGVVLNPGTPLTTIEYVLDCVDLVLIMSVNPGFGGQSFIESQVKKISDL 496
            T+NQIKSLGAKAGVVLNPGTPL+TIEYVLD VDLVLIMSVNPGFGGQSFIESQVKKISDL
Sbjct: 161  TVNQIKSLGAKAGVVLNPGTPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDL 220

Query: 495  RRMCVEKGVNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKKP 316
            R+MCVEKGVNPWIEVDGGV P NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SK+P
Sbjct: 221  RKMCVEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRP 280

Query: 315  VAVAV 301
              VAV
Sbjct: 281  EPVAV 285