BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007916
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...   155   3e-36
gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul...   148   4e-34
gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goods...   148   5e-34
gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]    146   2e-33
gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana cleve...   146   2e-33

>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/121 (64%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
 Frame = +2

Query: 134 MAFTGRFGSLVKRSLLQNTVTNGQVPPMSMFNAFRCMST-KLFIGSLSFNTDDRSLSDAF 310
           MAF  RFG+L+++S+ QN+ + GQ    ++ N+ RCMS+ KLFIG LS+ TDD+SL DAF
Sbjct: 1   MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAF 60

Query: 311 SQFGDVSEARVITDRDTGRSRGFGFVTFADEESANSAMSAMDGKELDGRPIRVNAANERP 490
           S FGDV EARVITDRDTGRSRGFGFV F  ++SA+SA+SAMDG+EL+GR IRV+ ANER 
Sbjct: 61  SSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERT 120

Query: 491 P 493
           P
Sbjct: 121 P 121


>gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
          Length = 144

 Score =  148 bits (374), Expect = 4e-34
 Identities = 75/122 (61%), Positives = 94/122 (77%)
 Frame = +2

Query: 134 MAFTGRFGSLVKRSLLQNTVTNGQVPPMSMFNAFRCMSTKLFIGSLSFNTDDRSLSDAFS 313
           MAF  + G L+++S+  N V+    P  SMF+A RCMSTKLF+G LS+ TDD+SL DAF+
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMFDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 314 QFGDVSEARVITDRDTGRSRGFGFVTFADEESANSAMSAMDGKELDGRPIRVNAANERPP 493
            FGDV +ARVI DRD+GRSRGFGFV F+D+ESAN A+ AMDG+EL GR IRV+ A ER P
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAP 119

Query: 494 RA 499
           R+
Sbjct: 120 RS 121


>gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
          Length = 144

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/122 (60%), Positives = 93/122 (76%)
 Frame = +2

Query: 134 MAFTGRFGSLVKRSLLQNTVTNGQVPPMSMFNAFRCMSTKLFIGSLSFNTDDRSLSDAFS 313
           MAF  + G L+++++  N V+    P  SM +AFRCMSTKLF+G LS+ TDD+SL DA +
Sbjct: 1   MAFYNKLGGLLRQNISGNAVS-ATTPMPSMLDAFRCMSTKLFVGGLSWGTDDQSLRDALA 59

Query: 314 QFGDVSEARVITDRDTGRSRGFGFVTFADEESANSAMSAMDGKELDGRPIRVNAANERPP 493
            FGDV +ARVI DRD+GRSRGFGFV F+D+ESAN A+ AMDG+EL GR IRVN A ER P
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVNIAQERAP 119

Query: 494 RA 499
           R+
Sbjct: 120 RS 121


>gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
          Length = 144

 Score =  146 bits (369), Expect = 2e-33
 Identities = 74/122 (60%), Positives = 93/122 (76%)
 Frame = +2

Query: 134 MAFTGRFGSLVKRSLLQNTVTNGQVPPMSMFNAFRCMSTKLFIGSLSFNTDDRSLSDAFS 313
           MAF  + G L+++S+  N V+    P  SM +A RCMSTKLF+G LS+ TDD+SL DAF+
Sbjct: 1   MAFYNKLGGLLRQSISGNAVS-ATSPMPSMLDAIRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 314 QFGDVSEARVITDRDTGRSRGFGFVTFADEESANSAMSAMDGKELDGRPIRVNAANERPP 493
            FGDV +ARVI DRD+GRSRGFGFV F+D+ESAN A+ AMDG+EL GR IRV+ A ER P
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAP 119

Query: 494 RA 499
           R+
Sbjct: 120 RS 121


>gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
          Length = 144

 Score =  146 bits (369), Expect = 2e-33
 Identities = 74/122 (60%), Positives = 93/122 (76%)
 Frame = +2

Query: 134 MAFTGRFGSLVKRSLLQNTVTNGQVPPMSMFNAFRCMSTKLFIGSLSFNTDDRSLSDAFS 313
           MAF  + G L+++S+  N V+     P SM +A RCMSTKLF+G LS+ TDD+SL DAF+
Sbjct: 1   MAFYNKLGGLLRQSISGNAVSATSTMP-SMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFA 59

Query: 314 QFGDVSEARVITDRDTGRSRGFGFVTFADEESANSAMSAMDGKELDGRPIRVNAANERPP 493
            FGDV +ARVI DRD+GRSRGFGFV F+D+ESAN A+ AMDG+EL GR IRV+ A ER P
Sbjct: 60  TFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAP 119

Query: 494 RA 499
           R+
Sbjct: 120 RS 121