BLASTX nr result

ID: Coptis25_contig00007911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007911
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   365   1e-98
ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus c...   341   3e-91
emb|CBI32261.3| unnamed protein product [Vitis vinifera]              335   2e-89
ref|NP_001241399.1| zinc finger protein CONSTANS-LIKE 13-like [G...   328   3e-87
ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   327   4e-87

>ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform 1 [Vitis
            vinifera]
          Length = 394

 Score =  365 bits (938), Expect = 1e-98
 Identities = 196/388 (50%), Positives = 244/388 (62%), Gaps = 7/388 (1%)
 Frame = -2

Query: 1370 NEEEINKTAQQQRLCDFCGETKALLYCKADSAKLCFKCDKQVHSTNQLFCKHTRSQLCDV 1191
            +EEE  K   Q RLCDFCG++ ALLYC+ADSAKLC  CD++VHSTNQLF KHTRS+LCDV
Sbjct: 13   HEEEGQKMTIQNRLCDFCGDSMALLYCRADSAKLCLSCDREVHSTNQLFTKHTRSRLCDV 72

Query: 1190 CNSNPASIFCSTDNLVLCQNCDWESHGNSNNKSHDRRPLEGFTGCPSVNELCTIFGFEDL 1011
            C+++PASI CSTDNLVLCQNCDW  HG S + +HDRRPLEGF+G PSV EL    GFEDL
Sbjct: 73   CDASPASILCSTDNLVLCQNCDWAKHGRSLSSAHDRRPLEGFSGQPSVTELLAFVGFEDL 132

Query: 1010 GKKKSFLIDVGSDGLFMDSGVPFVDG----FDDFLVWETPPIFSIDDLIGSTDSTQSFQA 843
            GKK  F  D      F+  GV    G    F DFLVW+TP + ++DDLI ST    +FQA
Sbjct: 133  GKKSLFCGDESEVNEFLGCGVYESVGVDEEFSDFLVWDTPAVVNLDDLIVSTACDHNFQA 192

Query: 842  MGNPPLPKNRNTACGKHKEDIMSQLGDMMELENCFINDPEDVE--FGFQPLVPESNLQQG 669
            MG PPLPKNR   CG+HK +I+ QL  + ++E  F  D  D +   GFQ  +P+  +Q+ 
Sbjct: 193  MGVPPLPKNRGAPCGQHKAEIIHQLRQLAKIELSFDFDHGDAKPPIGFQSHIPKQLIQKE 252

Query: 668  KLGTGFEHFADAEPIPFPVCKESENKWIRSSEESVQVPFPYAYTGSYTDQDSSTFDK-SD 492
                  +H  +     FP  + S  +W     E+     P    GS  D+      K SD
Sbjct: 253  NECNSCDHEVE---FVFPTYEASAFQWCSDGSEAANQVLPSVLLGSCADEKCLVPRKHSD 309

Query: 491  VLIGDDGSEAKGDLDVQVPQYPAIGETPVVLPKVALHKTIGHNRDSLLSRYKEKKKTRRY 312
              IG   S   G  D    + P + +T   LPKV++H+     RDS +SRYKEKKKTRRY
Sbjct: 310  --IGGSVSHTNGS-DEGKSECPVVTKTLPALPKVSVHELNSQERDSAISRYKEKKKTRRY 366

Query: 311  DHHIRYESRKARAEGRSRVRGRFAKVEH 228
            + HIRYESRKARAE R R++GRFAK++H
Sbjct: 367  EKHIRYESRKARAESRIRIKGRFAKMDH 394


>ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus communis]
            gi|223540063|gb|EEF41640.1| hypothetical protein
            RCOM_0555710 [Ricinus communis]
          Length = 411

 Score =  341 bits (874), Expect = 3e-91
 Identities = 193/396 (48%), Positives = 243/396 (61%), Gaps = 25/396 (6%)
 Frame = -2

Query: 1343 QQQRLCDFCGETKALLYCKADSAKLCFKCDKQVHSTNQLFCKHTRSQLCDVCNSNPASIF 1164
            QQ+RLCD+C +T ALLYC+ADSAKLC  CD++VHSTNQLF KHTRS LCD C+++PASIF
Sbjct: 21   QQERLCDYCNDTTALLYCRADSAKLCISCDREVHSTNQLFSKHTRSLLCDSCDASPASIF 80

Query: 1163 CSTDNLVLCQNCDWESHGNSNNKSHDRRPLEGFTGCPSVNELCTIFGFEDLG---KKKSF 993
            C T++ V CQNCDWE H  S +  H+RRP+EGF+G PSV+EL +I GFEDLG    KK+ 
Sbjct: 81   CETEHSVFCQNCDWEKHNLSLSSVHNRRPIEGFSGFPSVSELVSILGFEDLGDKKDKKAL 140

Query: 992  LIDVGSDGLFMD--SGVPFVDGFDDFLVWETPPIFSIDDLIGSTDSTQSFQAMGNPPLPK 819
            L + G +GL      G  F DG+ D L+WETP + SIDDLI S+DS  +F A+G PPLPK
Sbjct: 141  LFNEGDNGLASSGPDGSGFEDGYSDLLIWETPAVVSIDDLIVSSDSGPNFPALGVPPLPK 200

Query: 818  ----------------NRNTACGKHKEDIMSQLGDMMELE---NCFINDPEDVEFGFQPL 696
                            NRN  CG+HKE+I+ QL ++  LE   NC  N   +  + FQ  
Sbjct: 201  AIVFRFSLFYFSCKSQNRNAVCGQHKEEILRQLRELAGLEPDPNCH-NPETEPTYVFQSA 259

Query: 695  VPESNLQQGKLGTGFEHFADAEPIPFPVCKESENKWIR-SSEESVQVPFPYAYTGSYTDQ 519
              E N+Q        E    A PI  P  +E+   W+  + E   QV  P     S+ ++
Sbjct: 260  AGE-NMQTRMTHKCCEPV--ARPISSPSYEENIFNWLSDNGEAGNQVSVPCTLPRSHLEE 316

Query: 518  DSSTFDKSDVLIGDDGSEAKGDLDVQVPQYPAIGETPVVLPKVALHKTIGHNRDSLLSRY 339
                 DK   + G   S A G  + + PQYPA      V PKV  H      RDS +SRY
Sbjct: 317  SPVVPDKQSNIDG-SASYANGSHEGE-PQYPASTGLISVFPKVVSHDINSQERDSAISRY 374

Query: 338  KEKKKTRRYDHHIRYESRKARAEGRSRVRGRFAKVE 231
            KEK+KTRRYD HIRYESRKARAE R+R+RGRFAK++
Sbjct: 375  KEKRKTRRYDKHIRYESRKARAESRTRIRGRFAKMD 410


>emb|CBI32261.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  335 bits (858), Expect = 2e-89
 Identities = 180/362 (49%), Positives = 224/362 (61%), Gaps = 3/362 (0%)
 Frame = -2

Query: 1304 ALLYCKADSAKLCFKCDKQVHSTNQLFCKHTRSQLCDVCNSNPASIFCSTDNLVLCQNCD 1125
            ALLYC+ADSAKLC  CD++VHSTNQLF KHTRS+LCDVC+++PASI CSTDNLVLCQNCD
Sbjct: 2    ALLYCRADSAKLCLSCDREVHSTNQLFTKHTRSRLCDVCDASPASILCSTDNLVLCQNCD 61

Query: 1124 WESHGNSNNKSHDRRPLEGFTGCPSVNELCTIFGFEDLGKKKSFLIDVGSDGLFMDSGVP 945
            W  HG S + +HDRRPLEGF+G PSV EL    GFEDLGKK  F  D             
Sbjct: 62   WAKHGRSLSSAHDRRPLEGFSGQPSVTELLAFVGFEDLGKKSLFCGDESE---------- 111

Query: 944  FVDGFDDFLVWETPPIFSIDDLIGSTDSTQSFQAMGNPPLPKNRNTACGKHKEDIMSQLG 765
                F DFLVW+TP + ++DDLI ST    +FQAMG PPLPKNR   CG+HK +I+ QL 
Sbjct: 112  ----FSDFLVWDTPAVVNLDDLIVSTACDHNFQAMGVPPLPKNRGAPCGQHKAEIIHQLR 167

Query: 764  DMMELENCFINDPEDVE--FGFQPLVPESNLQQGKLGTGFEHFADAEPIPFPVCKESENK 591
             + ++E  F  D  D +   GFQ  +P+  +Q+       +H  +     FP  + S  +
Sbjct: 168  QLAKIELSFDFDHGDAKPPIGFQSHIPKQLIQKENECNSCDHEVE---FVFPTYEASAFQ 224

Query: 590  WIRSSEESVQVPFPYAYTGSYTDQDSSTFDK-SDVLIGDDGSEAKGDLDVQVPQYPAIGE 414
            W     E+     P    GS  D+      K SD  IG   S   G  D    + P + +
Sbjct: 225  WCSDGSEAANQVLPSVLLGSCADEKCLVPRKHSD--IGGSVSHTNGS-DEGKSECPVVTK 281

Query: 413  TPVVLPKVALHKTIGHNRDSLLSRYKEKKKTRRYDHHIRYESRKARAEGRSRVRGRFAKV 234
            T   LPKV++H+     RDS +SRYKEKKKTRRY+ HIRYESRKARAE R R++GRFAK+
Sbjct: 282  TLPALPKVSVHELNSQERDSAISRYKEKKKTRRYEKHIRYESRKARAESRIRIKGRFAKM 341

Query: 233  EH 228
            +H
Sbjct: 342  DH 343


>ref|NP_001241399.1| zinc finger protein CONSTANS-LIKE 13-like [Glycine max]
            gi|260513718|gb|ACX42571.1| CONSTANS-like zinc finger
            protein [Glycine max]
          Length = 351

 Score =  328 bits (840), Expect = 3e-87
 Identities = 180/375 (48%), Positives = 226/375 (60%), Gaps = 4/375 (1%)
 Frame = -2

Query: 1340 QQRLCDFCGETKALLYCKADSAKLCFKCDKQVHSTNQLFCKHTRSQLCDVCNSNPASIFC 1161
            + R CD+CG + ALLYC+ADSAKLCF CD++VHSTNQLF KHTR+ LCD C+ +PA+I C
Sbjct: 5    EARPCDYCGNSTALLYCRADSAKLCFSCDREVHSTNQLFSKHTRTLLCDACDDSPATILC 64

Query: 1160 STDNLVLCQNCDWESHGNSNNKS-HDRRPLEGFTGCPSVNELCTIFGFEDLGKKKSFLID 984
            STD  VLCQNCDWE+H  + + S H+RRPLEGFTGCPSV+EL +I GF D+ KK      
Sbjct: 65   STDTSVLCQNCDWENHNPALSDSLHERRPLEGFTGCPSVSELLSIVGFSDISKKSLLFSP 124

Query: 983  VGS--DGLFMDSGVPFVDGFDDFLVWETPPIFSIDDLIGSTDSTQSFQAMGNPPLPKNRN 810
             GS  DG F   G   ++G  D  VW+ P   ++DDLI S+ S+ SFQAM  PPLPKNR 
Sbjct: 125  QGSVADGFF---GASEIEGLSDMFVWDAPSFVTLDDLISSSPSSHSFQAMKVPPLPKNRK 181

Query: 809  TACGKHKEDIMSQLGDMMELENCFINDPEDVEFGFQPLVPESNLQQGKLGTGFEHFADAE 630
             ACG+HKE+I+SQL ++ + E               PL  E  +Q G L  GFE   +A+
Sbjct: 182  AACGQHKEEILSQLRELAKSE---------------PLDLEPYVQSGNLSLGFERDPEAD 226

Query: 629  PIPFPVCKESENKWIRSSEESV-QVPFPYAYTGSYTDQDSSTFDKSDVLIGDDGSEAKGD 453
              P        ++W R S E + QV  P    G+YT++       S V       + +G 
Sbjct: 227  IFP-------SHEWHRESSEPMHQVVPPDPSMGTYTEEIPVKHSTSAVGENHTYGDNEGK 279

Query: 452  LDVQVPQYPAIGETPVVLPKVALHKTIGHNRDSLLSRYKEKKKTRRYDHHIRYESRKARA 273
                 P      ET    PK A  +     RDS L RYK+KKKTRR+D HIRYESRK RA
Sbjct: 280  -----PSISLKSETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRA 334

Query: 272  EGRSRVRGRFAKVEH 228
            E R RV+GRFAK+ H
Sbjct: 335  ESRVRVKGRFAKMGH 349


>ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like [Glycine max]
          Length = 349

 Score =  327 bits (839), Expect = 4e-87
 Identities = 182/375 (48%), Positives = 231/375 (61%), Gaps = 4/375 (1%)
 Frame = -2

Query: 1340 QQRLCDFCGETKALLYCKADSAKLCFKCDKQVHSTNQLFCKHTRSQLCDVCNSNPASIFC 1161
            + R CD+CG + ALLYC+ADSAKLCF CD++VHSTNQLF KHTR+ LCD C+ +PA+I C
Sbjct: 4    EARSCDYCGHSTALLYCRADSAKLCFSCDREVHSTNQLFSKHTRTLLCDACDHSPATILC 63

Query: 1160 STDNLVLCQNCDWESHGNSNNKS-HDRRPLEGFTGCPSVNELCTIFGFEDLGKKKSFLID 984
            STD  VLCQNCDWE H  + + S H+RRPLEGFTGCPSV+EL +I GF DL KK      
Sbjct: 64   STDTSVLCQNCDWEKHNPALSDSLHERRPLEGFTGCPSVSELLSIVGFSDLSKKSLLSSP 123

Query: 983  VGS--DGLFMDSGVPFVDGFDDFLVWETPPIFSIDDLIGSTDSTQSFQAMGNPPLPKNRN 810
             GS  DG+F       ++G  D  VW++P   ++DDLI S+ S+ SFQAM  PPLPKNR 
Sbjct: 124  QGSGADGIFGGE----IEGLSDLFVWDSPSFVTLDDLISSSPSSHSFQAMEVPPLPKNRK 179

Query: 809  TACGKHKEDIMSQLGDMMELENCFINDPEDVEFGFQPLVPESNLQQGKLGTGFEHFADAE 630
             ACG+HKE+I+SQL ++ + E               PL  E  +  G L +GFE   +A+
Sbjct: 180  AACGQHKEEILSQLRELAKSE---------------PLDLEPYVSSGNLSSGFEREPEAD 224

Query: 629  PIPFPVCKESENKWIR-SSEESVQVPFPYAYTGSYTDQDSSTFDKSDVLIGDDGSEAKGD 453
              P        ++W R SSE   QV  P     +YT++    F  S   +G+  ++  GD
Sbjct: 225  IFP-------SHEWHRESSEPMYQVVPPDPLMRTYTEE--IPFKHSTSAVGE--TQTYGD 273

Query: 452  LDVQVPQYPAIGETPVVLPKVALHKTIGHNRDSLLSRYKEKKKTRRYDHHIRYESRKARA 273
             +   P      ET    PK A  +     RDS L RYK+KKKTRR+D HIRYESRK RA
Sbjct: 274  -NGGKPSISLKSETLSTTPKAAACELTSQERDSALLRYKQKKKTRRFDKHIRYESRKVRA 332

Query: 272  EGRSRVRGRFAKVEH 228
            E R RV+GRFAK+EH
Sbjct: 333  ESRVRVKGRFAKMEH 347


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