BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007901
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|2...   167   4e-39
ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatu...   165   2e-38
ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|2...   165   2e-38
gb|AFK39323.1| unknown [Medicago truncatula]                          162   8e-38
ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatu...   162   8e-38

>ref|XP_002308136.1| predicted protein [Populus trichocarpa] gi|222854112|gb|EEE91659.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  167 bits (422), Expect = 4e-39
 Identities = 87/103 (84%), Positives = 90/103 (87%), Gaps = 1/103 (0%)
 Frame = -2

Query: 542 MKPVVGMVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDERNECNIGDRVRLDPS 363
           MK VVGMVVSNKMQKSVVVAVDRLFHHK+YNRYVKRTSKFMAHDE N CNIGDRVRLDPS
Sbjct: 1   MKSVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENNLCNIGDRVRLDPS 60

Query: 362 RPLSKRKNWIVAEILKKARIYVPP-AARVADSNTQTGVASGSS 237
           RPLSKRKNW+VAEILKKARIYVPP AA  A S T+   A  SS
Sbjct: 61  RPLSKRKNWVVAEILKKARIYVPPSAADNAASKTKGAEAPTSS 103


>ref|XP_003618144.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355493159|gb|AES74362.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 103

 Score =  165 bits (417), Expect = 2e-38
 Identities = 80/102 (78%), Positives = 91/102 (89%)
 Frame = -2

Query: 542 MKPVVGMVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDERNECNIGDRVRLDPS 363
           MK VVGMVVSNKMQKSVVVAVDRLFHHKM+NRY+KRTSKFMAHDE N CNIGDRVRLD S
Sbjct: 1   MKEVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 60

Query: 362 RPLSKRKNWIVAEILKKARIYVPPAARVADSNTQTGVASGSS 237
           RPLSKRK+W+VAEILKKARIYVPP+A V+++ +   V + S+
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPSATVSENASSNSVRATST 102


>ref|XP_002331425.1| predicted protein [Populus trichocarpa] gi|222873639|gb|EEF10770.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  165 bits (417), Expect = 2e-38
 Identities = 80/102 (78%), Positives = 91/102 (89%)
 Frame = -2

Query: 542 MKPVVGMVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDERNECNIGDRVRLDPS 363
           MK VVGMVVSNKMQKSVVVAVDRLFHHK+YNRYVKRTSKFMAHDE + CNIGDRVRLDPS
Sbjct: 1   MKSVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYVKRTSKFMAHDENDLCNIGDRVRLDPS 60

Query: 362 RPLSKRKNWIVAEILKKARIYVPPAARVADSNTQTGVASGSS 237
           RPLSKRK+W+VAEILKKARIYVPP+A  + ++   G+ + +S
Sbjct: 61  RPLSKRKHWVVAEILKKARIYVPPSAGDSGASNTAGMKASAS 102


>gb|AFK39323.1| unknown [Medicago truncatula]
          Length = 103

 Score =  162 bits (411), Expect = 8e-38
 Identities = 79/102 (77%), Positives = 89/102 (87%)
 Frame = -2

Query: 542 MKPVVGMVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDERNECNIGDRVRLDPS 363
           MK VVGMVVSNKMQKSVVVAVDRLFHHKM+NRY+KRTSKFMAHDE N CNIGDRVRLD S
Sbjct: 1   MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 60

Query: 362 RPLSKRKNWIVAEILKKARIYVPPAARVADSNTQTGVASGSS 237
           RPLSK K+W+VAEILKKARIYVPP+A V+++ +   V   S+
Sbjct: 61  RPLSKHKHWVVAEILKKARIYVPPSATVSENASSNSVGPTST 102


>ref|XP_003604547.1| 30S ribosomal protein S17 [Medicago truncatula]
           gi|355505602|gb|AES86744.1| 30S ribosomal protein S17
           [Medicago truncatula]
          Length = 172

 Score =  162 bits (411), Expect = 8e-38
 Identities = 79/102 (77%), Positives = 89/102 (87%)
 Frame = -2

Query: 542 MKPVVGMVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDERNECNIGDRVRLDPS 363
           MK VVGMVVSNKMQKSVVVAVDRLFHHKM+NRY+KRTSKFMAHDE N CNIGDRVRLD S
Sbjct: 70  MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMAHDENNLCNIGDRVRLDSS 129

Query: 362 RPLSKRKNWIVAEILKKARIYVPPAARVADSNTQTGVASGSS 237
           RPLSK K+W+VAEILKKARIYVPP+A V+++ +   V   S+
Sbjct: 130 RPLSKHKHWVVAEILKKARIYVPPSATVSENASSNSVGPTST 171