BLASTX nr result
ID: Coptis25_contig00007899
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007899 (252 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 80 2e-13 ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat... 75 4e-12 ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 70 1e-10 >ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial-like [Vitis vinifera] Length = 1048 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/81 (45%), Positives = 52/81 (64%) Frame = -2 Query: 245 SQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISDA 66 SQ+P++ V+SC+L+SFC+ +N+ L+P +FE LVKGLCR +I+DA Sbjct: 340 SQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVKGLCRADRITDA 399 Query: 65 LEIVSIMKQNHVVDGNIYGSI 3 EIV IMK+ VVD +YG I Sbjct: 400 AEIVDIMKKRKVVDAKVYGII 420 >ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial-like [Glycine max] Length = 1034 Score = 75.5 bits (184), Expect = 4e-12 Identities = 34/82 (41%), Positives = 55/82 (67%) Frame = -2 Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69 +S +P++ V+ C+L+SFC+ +++ L+PEN+E LV+GLC+ G+I+D Sbjct: 324 LSVMPEKCVHGCMLKSFCISGSIEEALELIRELKSKDLDLEPENYETLVRGLCKAGRITD 383 Query: 68 ALEIVSIMKQNHVVDGNIYGSI 3 ALEIV IMK+ +VDG ++G I Sbjct: 384 ALEIVDIMKRRDMVDGRVHGII 405 >ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1| predicted protein [Populus trichocarpa] Length = 1048 Score = 70.9 bits (172), Expect = 1e-10 Identities = 37/82 (45%), Positives = 48/82 (58%) Frame = -2 Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69 VSQ+P+ V+ C+L+S+CV + I LD E E LVKGL R +I+D Sbjct: 338 VSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRIAD 397 Query: 68 ALEIVSIMKQNHVVDGNIYGSI 3 ALEIV IMK+ VDG +YG I Sbjct: 398 ALEIVEIMKRKDFVDGKVYGII 419 >ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1| predicted protein [Populus trichocarpa] Length = 1048 Score = 70.9 bits (172), Expect = 1e-10 Identities = 37/82 (45%), Positives = 48/82 (58%) Frame = -2 Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69 VSQ+P+ V+ C+L+S+CV + I LD E E LVKGL R +I+D Sbjct: 338 VSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRIAD 397 Query: 68 ALEIVSIMKQNHVVDGNIYGSI 3 ALEIV IMK+ VDG +YG I Sbjct: 398 ALEIVEIMKRKDFVDGKVYGII 419 >ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 1072 Score = 70.5 bits (171), Expect = 1e-10 Identities = 35/82 (42%), Positives = 50/82 (60%) Frame = -2 Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69 +SQ+P+ V CIL+SFCV ++I++D E LVKGLCR +I+D Sbjct: 344 LSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRGDRITD 403 Query: 68 ALEIVSIMKQNHVVDGNIYGSI 3 A+EIV IMK+ +++D IYG I Sbjct: 404 AVEIVEIMKKRNLIDAKIYGII 425