BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007899
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat...    80   2e-13
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat...    75   4e-12
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,...    70   1e-10

>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Vitis vinifera]
          Length = 1048

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/81 (45%), Positives = 52/81 (64%)
 Frame = -2

Query: 245 SQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISDA 66
           SQ+P++ V+SC+L+SFC+                +N+ L+P +FE LVKGLCR  +I+DA
Sbjct: 340 SQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNLTLEPNDFETLVKGLCRADRITDA 399

Query: 65  LEIVSIMKQNHVVDGNIYGSI 3
            EIV IMK+  VVD  +YG I
Sbjct: 400 AEIVDIMKKRKVVDAKVYGII 420


>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g06400, mitochondrial-like [Glycine max]
          Length = 1034

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/82 (41%), Positives = 55/82 (67%)
 Frame = -2

Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69
           +S +P++ V+ C+L+SFC+                +++ L+PEN+E LV+GLC+ G+I+D
Sbjct: 324 LSVMPEKCVHGCMLKSFCISGSIEEALELIRELKSKDLDLEPENYETLVRGLCKAGRITD 383

Query: 68  ALEIVSIMKQNHVVDGNIYGSI 3
           ALEIV IMK+  +VDG ++G I
Sbjct: 384 ALEIVDIMKRRDMVDGRVHGII 405


>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/82 (45%), Positives = 48/82 (58%)
 Frame = -2

Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69
           VSQ+P+  V+ C+L+S+CV                + I LD E  E LVKGL R  +I+D
Sbjct: 338 VSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRIAD 397

Query: 68  ALEIVSIMKQNHVVDGNIYGSI 3
           ALEIV IMK+   VDG +YG I
Sbjct: 398 ALEIVEIMKRKDFVDGKVYGII 419


>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/82 (45%), Positives = 48/82 (58%)
 Frame = -2

Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69
           VSQ+P+  V+ C+L+S+CV                + I LD E  E LVKGL R  +I+D
Sbjct: 338 VSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRIAD 397

Query: 68  ALEIVSIMKQNHVVDGNIYGSI 3
           ALEIV IMK+   VDG +YG I
Sbjct: 398 ALEIVEIMKRKDFVDGKVYGII 419


>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1072

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/82 (42%), Positives = 50/82 (60%)
 Frame = -2

Query: 248 VSQVPQQKVYSCILRSFCVGXXXXXXXXXXXXXXXENIMLDPENFEVLVKGLCRDGKISD 69
           +SQ+P+  V  CIL+SFCV                ++I++D E    LVKGLCR  +I+D
Sbjct: 344 LSQIPEHDVNVCILKSFCVAGKIREALELIRDLKNKDILIDYEYLGTLVKGLCRGDRITD 403

Query: 68  ALEIVSIMKQNHVVDGNIYGSI 3
           A+EIV IMK+ +++D  IYG I
Sbjct: 404 AVEIVEIMKKRNLIDAKIYGII 425