BLASTX nr result

ID: Coptis25_contig00007889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007889
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [G...   191   5e-47
ref|XP_003541076.1| PREDICTED: UPF0496 protein At4g34320-like [G...   191   7e-47
ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [V...   189   3e-46
emb|CBI32550.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_004148297.1| PREDICTED: UPF0496 protein At4g34320-like [C...   183   2e-44

>ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 374

 Score =  191 bits (486), Expect = 5e-47
 Identities = 99/145 (68%), Positives = 112/145 (77%)
 Frame = -3

Query: 567 LICSIXXXXXXXXXXXXXXXXATSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTY 388
           LICS+                ATSIP+GSMGKW DSLW+ YE+ALKGQK+VI +MQAGTY
Sbjct: 230 LICSVVAAAIAAPPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTY 289

Query: 387 IAIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLGALMKGIEDLSE 208
           +AIKDLD IRVL+DRLEIEIESLL N DF + E+EAVK  IEEIKK LG  MK +EDL+ 
Sbjct: 290 VAIKDLDNIRVLIDRLEIEIESLLHNVDFAI-EEEAVKVAIEEIKKKLGVFMKNVEDLAV 348

Query: 207 QADRCSRDIRRARTVVLQRIIKQPN 133
           QAD CSRDIRRARTVVLQRIIK P+
Sbjct: 349 QADMCSRDIRRARTVVLQRIIKHPH 373


>ref|XP_003541076.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 373

 Score =  191 bits (485), Expect = 7e-47
 Identities = 98/145 (67%), Positives = 112/145 (77%)
 Frame = -3

Query: 567 LICSIXXXXXXXXXXXXXXXXATSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTY 388
           LICS+                ATSIP+GSMGKW DSLW+ YE+ALKGQK+VI +MQAGTY
Sbjct: 229 LICSVVAAAIAAPPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTY 288

Query: 387 IAIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLGALMKGIEDLSE 208
           +AIKDLD IR+L+DRLEIEIESLL N DF + E+EAVK  IEEIKK LG  MK +EDL+ 
Sbjct: 289 VAIKDLDNIRILIDRLEIEIESLLHNVDFAI-EEEAVKVAIEEIKKKLGVFMKNVEDLAV 347

Query: 207 QADRCSRDIRRARTVVLQRIIKQPN 133
           QAD CSRDIRRARTVVLQRIIK P+
Sbjct: 348 QADMCSRDIRRARTVVLQRIIKHPH 372


>ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [Vitis vinifera]
          Length = 373

 Score =  189 bits (480), Expect = 3e-46
 Identities = 99/145 (68%), Positives = 112/145 (77%)
 Frame = -3

Query: 567 LICSIXXXXXXXXXXXXXXXXATSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTY 388
           LICS+                A S+P+G+MGKW DSL K YE+ALKGQK+VI +MQ GTY
Sbjct: 229 LICSVVAAAMAAPPVAAALAAAASLPLGTMGKWIDSLLKNYENALKGQKEVISSMQVGTY 288

Query: 387 IAIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLGALMKGIEDLSE 208
           +AIKDLD IRVL+DRLEIEIESLLQ  D+V+KE EAVKFGIEEIKK LG  MK ++DL  
Sbjct: 289 VAIKDLDTIRVLIDRLEIEIESLLQTTDYVIKE-EAVKFGIEEIKKKLGVFMKNVDDLGV 347

Query: 207 QADRCSRDIRRARTVVLQRIIKQPN 133
           QAD CSRDIRRARTVVLQRIIKQPN
Sbjct: 348 QADMCSRDIRRARTVVLQRIIKQPN 372


>emb|CBI32550.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  186 bits (473), Expect = 2e-45
 Identities = 94/122 (77%), Positives = 106/122 (86%)
 Frame = -3

Query: 498 SIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTYIAIKDLDGIRVLVDRLEIEIESL 319
           S+P+G+MGKW DSL K YE+ALKGQK+VI +MQ GTY+AIKDLD IRVL+DRLEIEIESL
Sbjct: 77  SLPLGTMGKWIDSLLKNYENALKGQKEVISSMQVGTYVAIKDLDTIRVLIDRLEIEIESL 136

Query: 318 LQNADFVLKEDEAVKFGIEEIKKNLGALMKGIEDLSEQADRCSRDIRRARTVVLQRIIKQ 139
           LQ  D+V+KE EAVKFGIEEIKK LG  MK ++DL  QAD CSRDIRRARTVVLQRIIKQ
Sbjct: 137 LQTTDYVIKE-EAVKFGIEEIKKKLGVFMKNVDDLGVQADMCSRDIRRARTVVLQRIIKQ 195

Query: 138 PN 133
           PN
Sbjct: 196 PN 197


>ref|XP_004148297.1| PREDICTED: UPF0496 protein At4g34320-like [Cucumis sativus]
           gi|449510317|ref|XP_004163630.1| PREDICTED: UPF0496
           protein At4g34320-like [Cucumis sativus]
          Length = 372

 Score =  183 bits (464), Expect = 2e-44
 Identities = 94/145 (64%), Positives = 109/145 (75%)
 Frame = -3

Query: 567 LICSIXXXXXXXXXXXXXXXXATSIPVGSMGKWFDSLWKKYEDALKGQKDVIRTMQAGTY 388
           LICSI                A SIPVGS+GKW DSLWK YE ALKGQK+V+ +MQ GTY
Sbjct: 228 LICSIVAAAMAAPPVAAAMAAAASIPVGSVGKWIDSLWKNYEAALKGQKEVVSSMQVGTY 287

Query: 387 IAIKDLDGIRVLVDRLEIEIESLLQNADFVLKEDEAVKFGIEEIKKNLGALMKGIEDLSE 208
           +AIKD+D IRVL+D+L +EIESLL+ ADF + E+EAVK G+EE+KK LG  MK +EDL  
Sbjct: 288 LAIKDMDNIRVLIDKLTMEIESLLKKADFAI-EEEAVKLGVEEMKKKLGQFMKNVEDLGV 346

Query: 207 QADRCSRDIRRARTVVLQRIIKQPN 133
           QAD CSRDIRRARTVVLQRIIK PN
Sbjct: 347 QADSCSRDIRRARTVVLQRIIKHPN 371


Top