BLASTX nr result

ID: Coptis25_contig00007885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007885
         (1631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631655.1| PREDICTED: probable phenylalanyl-tRNA synthe...   695   0.0  
ref|XP_004150173.1| PREDICTED: probable phenylalanine--tRNA liga...   686   0.0  
ref|XP_003537873.1| PREDICTED: probable phenylalanyl-tRNA synthe...   679   0.0  
ref|XP_003606906.1| Phenylalanyl-tRNA synthetase beta subunit [M...   679   0.0  
ref|XP_003541045.1| PREDICTED: probable phenylalanyl-tRNA synthe...   678   0.0  

>ref|XP_003631655.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
            [Vitis vinifera] gi|297741458|emb|CBI32589.3| unnamed
            protein product [Vitis vinifera]
          Length = 488

 Score =  695 bits (1794), Expect = 0.0
 Identities = 335/470 (71%), Positives = 386/470 (82%)
 Frame = +3

Query: 3    SGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEGNQYAETGSPEVQLFNA 182
            SGDF+    IDH++IVNV+KSLHGF LV AQ+IKRE WVL+DEG  YA  GSPEVQLF A
Sbjct: 19   SGDFASQSGIDHNEIVNVIKSLHGFRLVDAQDIKREKWVLTDEGKLYAAAGSPEVQLFLA 78

Query: 183  VPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKVQCVEDHVKDLLLQIKD 362
            VPP+GI+R+ELQ+KV P + KIG   A+K+KW+E+GKQQV+RKVQ VED  KDLL +I++
Sbjct: 79   VPPEGISREELQRKVDPSVYKIGCSQAIKNKWLEIGKQQVSRKVQQVEDTAKDLLTRIQN 138

Query: 363  GKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATDLTRELLQSGDWKNMEL 542
             + +   DI+ LKRRKLI LQTW G+S++KGPN+  +RKK+ATDLTRE LQ GDWK +E 
Sbjct: 139  EEALSQADIDALKRRKLIALQTWKGYSVRKGPNYAPKRKKVATDLTRENLQRGDWKELEF 198

Query: 543  KPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNYVESSFWNFDVLFQPQQ 722
            K YNF+AK             KVR + + IF++MGFEEMPTNN+VESSFWNFD LFQPQQ
Sbjct: 199  KEYNFNAKGQSAEGGHLHPLLKVRRQLQMIFLQMGFEEMPTNNFVESSFWNFDALFQPQQ 258

Query: 723  HPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXXXNWKREEAEKNVLRTH 902
            HPARDSHDTFFLQ PSTT  LPEDY+ RVK VH            +WKREEA KN+LRTH
Sbjct: 259  HPARDSHDTFFLQAPSTTKMLPEDYVERVKHVHEHGGYGSRGYGYDWKREEANKNLLRTH 318

Query: 903  TTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQIEGVVCDRGLTLGDLM 1082
            TTAVS+RMLY LAQKPF P++Y+SIDRVFRNEAVDRTHLAEFHQIEG+VCDRGLTLGDL+
Sbjct: 319  TTAVSSRMLYLLAQKPFAPKKYYSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLGDLI 378

Query: 1083 GVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEVGNSGMFRPEMLLPMGF 1262
            GVL +FF +LGMS+LRFK  YNPYTEPSMEI+SYHEG KKWVE+GNSGMFRPEMLLPMG 
Sbjct: 379  GVLQDFFSRLGMSQLRFKPAYNPYTEPSMEIFSYHEGLKKWVEIGNSGMFRPEMLLPMGL 438

Query: 1263 PEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPICRLGID 1412
            PEDV  IAWGLSLERPTMILYG+DNIRDLFG KVDL LIKRNPICRLGI+
Sbjct: 439  PEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLGLIKRNPICRLGIE 488


>ref|XP_004150173.1| PREDICTED: probable phenylalanine--tRNA ligase alpha subunit-like
            [Cucumis sativus]
          Length = 492

 Score =  686 bits (1770), Expect = 0.0
 Identities = 328/470 (69%), Positives = 381/470 (81%)
 Frame = +3

Query: 3    SGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEGNQYAETGSPEVQLFNA 182
            SG F+    +DH+++VNV+KSL+GF  V A++IK E WVL+ EG  Y  TGSPE+QLF A
Sbjct: 19   SGRFADEFGLDHNEVVNVIKSLNGFRYVDAEDIKMEKWVLTKEGETYTATGSPEMQLFLA 78

Query: 183  VPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKVQCVEDHVKDLLLQIKD 362
            +PP+GI R+ELQKK+ P I KIG   A K+KW+EMGKQ ++RKV  VED VK+ LLQIKD
Sbjct: 79   IPPEGIPREELQKKLGPSIFKIGCAQAAKNKWVEMGKQMISRKVHHVEDKVKNSLLQIKD 138

Query: 363  GKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATDLTRELLQSGDWKNMEL 542
            GK I  ED+  LK RKLI  QTW G+S+++GPN+   RKK+ATDLTRE LQ GDW+ +E 
Sbjct: 139  GKEIYDEDVKALKARKLIVSQTWKGYSVRRGPNYAPRRKKVATDLTRENLQRGDWRELEF 198

Query: 543  KPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNYVESSFWNFDVLFQPQQ 722
            K YNF+AK             KVR++ +NIF +MGFEEMPTNNYVESSFWNFD LFQPQQ
Sbjct: 199  KEYNFNAKGQPLFCGHLHPLLKVRQQIKNIFRQMGFEEMPTNNYVESSFWNFDTLFQPQQ 258

Query: 723  HPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXXXNWKREEAEKNVLRTH 902
            HPARD+HDTFFL+ PSTT  LPEDY+ RVK+VH            NWKREEA KN+LRTH
Sbjct: 259  HPARDAHDTFFLKAPSTTRELPEDYVERVKQVHETGGYGSRGYGYNWKREEANKNLLRTH 318

Query: 903  TTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQIEGVVCDRGLTLGDLM 1082
            TTAV++RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQIEG++C RGLTLGDL+
Sbjct: 319  TTAVTSRMLYMLAQKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLICGRGLTLGDLI 378

Query: 1083 GVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEVGNSGMFRPEMLLPMGF 1262
            GVLY+FF +LGMSKLRFK  YNPYTEPSMEI+SYHEGFKKWVEVGNSGMFRPEMLLPMGF
Sbjct: 379  GVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLLPMGF 438

Query: 1263 PEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPICRLGID 1412
            PED   IAWGLSLERPTMI+YGIDNIRDLFG KVDLSL+K+NPICRLGI+
Sbjct: 439  PEDARIIAWGLSLERPTMIMYGIDNIRDLFGHKVDLSLVKKNPICRLGIE 488


>ref|XP_003537873.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
            isoform 1 [Glycine max]
          Length = 488

 Score =  679 bits (1751), Expect = 0.0
 Identities = 326/470 (69%), Positives = 381/470 (81%)
 Frame = +3

Query: 3    SGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEGNQYAETGSPEVQLFNA 182
            SG+F+    I+H++IVNV+KSLHGF  V AQ+IKRE WVL+DEG  YA  GSPEVQLF A
Sbjct: 19   SGEFAAERGIEHNEIVNVIKSLHGFRYVDAQDIKRETWVLTDEGETYATVGSPEVQLFLA 78

Query: 183  VPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKVQCVEDHVKDLLLQIKD 362
            +P +GI+++ELQKK+ P + KIG   A K+KW+EMGKQ ++RKVQ V+D VKDLLLQI+ 
Sbjct: 79   IPQEGISKEELQKKLDPSLFKIGCAQAAKNKWVEMGKQLISRKVQHVDDKVKDLLLQIQQ 138

Query: 363  GKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATDLTRELLQSGDWKNMEL 542
            G  IGS++I  LK RKLI  QTW G+SLK+GPN+  +RKK+ TDLTR+  QSG+WK +E 
Sbjct: 139  GLNIGSDEIKALKVRKLIIPQTWKGYSLKRGPNYAPKRKKVVTDLTRDNFQSGEWKELEF 198

Query: 543  KPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNYVESSFWNFDVLFQPQQ 722
            K YN+SAK             KVR + + IF+ MGFEEMPTNN+VESSFWNFD LFQPQQ
Sbjct: 199  KEYNYSAKGAPLEGGNLHPLLKVRAQLKQIFLCMGFEEMPTNNFVESSFWNFDALFQPQQ 258

Query: 723  HPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXXXNWKREEAEKNVLRTH 902
            HPARDSHDTFFL+ PSTT  LPEDY+ RVK VH            +WKREEA KN+LRTH
Sbjct: 259  HPARDSHDTFFLETPSTTKILPEDYVQRVKHVHESGGYGSRGYAYDWKREEANKNLLRTH 318

Query: 903  TTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQIEGVVCDRGLTLGDLM 1082
            TTAVS+RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQIEG+VCDRGLTL DL+
Sbjct: 319  TTAVSSRMLYQLAQKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLCDLI 378

Query: 1083 GVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEVGNSGMFRPEMLLPMGF 1262
            G+L++FF +LGM+KL+FK  YNPYTEPSMEI+SYHEGFKKWVE+GNSGMFRPEML PMG 
Sbjct: 379  GILHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEIGNSGMFRPEMLQPMGL 438

Query: 1263 PEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPICRLGID 1412
            PEDV  IAWGLSLERPTMILYGIDNIRDLFG KVDL LIK+NP+CRLGID
Sbjct: 439  PEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKKNPVCRLGID 488


>ref|XP_003606906.1| Phenylalanyl-tRNA synthetase beta subunit [Medicago truncatula]
            gi|355507961|gb|AES89103.1| Phenylalanyl-tRNA synthetase
            beta subunit [Medicago truncatula]
          Length = 560

 Score =  679 bits (1751), Expect = 0.0
 Identities = 329/470 (70%), Positives = 380/470 (80%)
 Frame = +3

Query: 3    SGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEGNQYAETGSPEVQLFNA 182
            SG+F+    IDH++IVNVVKSLHGF  V A +IKRE WVL+DEGN YA  GSPE QL  A
Sbjct: 91   SGEFAAERGIDHNEIVNVVKSLHGFRYVDAVDIKRETWVLTDEGNTYATLGSPEFQLILA 150

Query: 183  VPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKVQCVEDHVKDLLLQIKD 362
            +PP+GI+RDELQKK+ P + KI    A K+KW+EMGKQ ++RKVQ VED VK+LLLQI+ 
Sbjct: 151  IPPEGISRDELQKKLGPSVFKIACAQAAKNKWVEMGKQLISRKVQDVEDRVKNLLLQIQQ 210

Query: 363  GKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATDLTRELLQSGDWKNMEL 542
            G+GIGS+DI  LK RKLI  QTW G+S+KKGPN+  +RKK+ TDLTR+  QSG+WK +E 
Sbjct: 211  GQGIGSDDIKALKARKLIVPQTWKGYSVKKGPNYAPKRKKVVTDLTRDNFQSGEWKEIEF 270

Query: 543  KPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNYVESSFWNFDVLFQPQQ 722
            K YN++AK             KVR + + IF  MGFEEMPTNNYVESSFWNFD LFQPQQ
Sbjct: 271  KEYNYTAKGQPLEGGSLHPLLKVRAQIKQIFHCMGFEEMPTNNYVESSFWNFDSLFQPQQ 330

Query: 723  HPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXXXNWKREEAEKNVLRTH 902
            HPARDSHDTFFL+ PSTT  LPEDY+ RVK++H            +WKREEA KN+LRTH
Sbjct: 331  HPARDSHDTFFLEAPSTTKKLPEDYVQRVKQIHESGGYESRGYAYDWKREEANKNLLRTH 390

Query: 903  TTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQIEGVVCDRGLTLGDLM 1082
            TTAVS+RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQIEG+VCDRGLTL DL+
Sbjct: 391  TTAVSSRMLYQLAQKPFSPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLCDLI 450

Query: 1083 GVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEVGNSGMFRPEMLLPMGF 1262
            GVL++FF +LGM+KL+FK  YNPYTEPSMEI+SYHEGFKKWVEVGNSGMFRPEML PMG 
Sbjct: 451  GVLHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLRPMGL 510

Query: 1263 PEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPICRLGID 1412
            PEDV  IAWGLSLERPTMI+YGIDNIRDLFG KVDL LIK+N ICRLGI+
Sbjct: 511  PEDVQVIAWGLSLERPTMIMYGIDNIRDLFGHKVDLGLIKKNSICRLGIE 560


>ref|XP_003541045.1| PREDICTED: probable phenylalanyl-tRNA synthetase alpha chain-like
            [Glycine max]
          Length = 488

 Score =  678 bits (1750), Expect = 0.0
 Identities = 329/470 (70%), Positives = 381/470 (81%)
 Frame = +3

Query: 3    SGDFSKSVNIDHSDIVNVVKSLHGFGLVLAQEIKRENWVLSDEGNQYAETGSPEVQLFNA 182
            SG+F+    IDH++IVNVVKSLHGF  V AQ+IKRE WVL+DEG  YA  GSPEVQLF A
Sbjct: 19   SGEFAAECGIDHNEIVNVVKSLHGFRYVDAQDIKRETWVLTDEGKTYATVGSPEVQLFLA 78

Query: 183  VPPQGIARDELQKKVAPLILKIGSQYAVKSKWIEMGKQQVTRKVQCVEDHVKDLLLQIKD 362
            VP +GI+++ELQKK+ P + KIG   A K+KW++MGKQ ++RKVQ V+D VKDLLLQI+ 
Sbjct: 79   VPQEGISKEELQKKLDPSVFKIGCAQAAKNKWVDMGKQLMSRKVQHVDDKVKDLLLQIQQ 138

Query: 363  GKGIGSEDINLLKRRKLIELQTWNGFSLKKGPNFVLERKKLATDLTRELLQSGDWKNMEL 542
            G  IGS++I  LK RKLI  QTW G+SLK+GPN+  +RKK+ TDLTR+  QSG+WK +E 
Sbjct: 139  GLNIGSDEIKALKVRKLIVPQTWKGYSLKRGPNYAPKRKKVVTDLTRDNFQSGEWKELEF 198

Query: 543  KPYNFSAKAXXXXXXXXXXXXKVRERFRNIFIEMGFEEMPTNNYVESSFWNFDVLFQPQQ 722
            K YN+SAK             KVR + + IF+ MGFEEMPTNN+VESSFWNFD LFQPQQ
Sbjct: 199  KEYNYSAKGQPLEGGSLHPLLKVRAQLKQIFLCMGFEEMPTNNFVESSFWNFDALFQPQQ 258

Query: 723  HPARDSHDTFFLQVPSTTLALPEDYLLRVKRVHXXXXXXXXXXXXNWKREEAEKNVLRTH 902
            HPARDSHDTFFL+ PSTT  LPEDY+ RV++VH            +WKREEA KN+LRTH
Sbjct: 259  HPARDSHDTFFLETPSTTKILPEDYVQRVRQVHESGGYGSRGYAYDWKREEANKNLLRTH 318

Query: 903  TTAVSARMLYALAQKPFIPRRYFSIDRVFRNEAVDRTHLAEFHQIEGVVCDRGLTLGDLM 1082
            TTAVS+RMLY LAQKPF P++YFSIDRVFRNEAVDRTHLAEFHQIEG+VCD GLTL DL+
Sbjct: 319  TTAVSSRMLYQLAQKPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDLGLTLCDLI 378

Query: 1083 GVLYEFFRKLGMSKLRFKSTYNPYTEPSMEIYSYHEGFKKWVEVGNSGMFRPEMLLPMGF 1262
            GVL++FF +LGM+KL+FK  YNPYTEPSMEI+SYHEGFKKWVEVGNSGMFRPEML PMG 
Sbjct: 379  GVLHDFFSRLGMTKLKFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLQPMGL 438

Query: 1263 PEDVTAIAWGLSLERPTMILYGIDNIRDLFGPKVDLSLIKRNPICRLGID 1412
            PEDV  IAWGLSLERPTMILYGIDNIRDLFG KVDL LIK+NPICRLGID
Sbjct: 439  PEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKKNPICRLGID 488


Top