BLASTX nr result

ID: Coptis25_contig00007879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007879
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633954.1| PREDICTED: transcription factor ASG4-like [V...   211   4e-53
gb|ABV02070.1| transcription factor 1R-MYB1 [Chimonanthus praecox]    208   3e-52
ref|XP_002320823.1| predicted protein [Populus trichocarpa] gi|2...   207   9e-52
ref|XP_003535596.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   199   2e-49
ref|XP_003556126.1| PREDICTED: transcription factor ASG4 [Glycin...   199   2e-49

>ref|XP_003633954.1| PREDICTED: transcription factor ASG4-like [Vitis vinifera]
           gi|297745319|emb|CBI40399.3| unnamed protein product
           [Vitis vinifera]
          Length = 328

 Score =  211 bits (538), Expect = 4e-53
 Identities = 111/155 (71%), Positives = 122/155 (78%), Gaps = 2/155 (1%)
 Frame = -1

Query: 460 SLDDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 281
           S +D +KK RKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA
Sbjct: 39  SSEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 98

Query: 280 QKYFIKVQKNGTSEHVXXXXXXXXXXXXXPQKAIKNAPVLSQVIGAVQSSSAMLEPGFVM 101
           QKYF+KVQKNGTSEHV             PQKA KNAPV  Q   A Q+S+ +LEPGFV+
Sbjct: 99  QKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNAPVFPQDTMAFQTSATLLEPGFVL 158

Query: 100 RPDSSTMLRNSTTSPAVSSWAPNSIPP--VSHVTK 2
           RPDSS++LRN   + A+SSW  NS PP  VSHVTK
Sbjct: 159 RPDSSSVLRNPMNNAALSSWTYNSQPPVSVSHVTK 193


>gb|ABV02070.1| transcription factor 1R-MYB1 [Chimonanthus praecox]
          Length = 318

 Score =  208 bits (530), Expect = 3e-52
 Identities = 108/149 (72%), Positives = 117/149 (78%)
 Frame = -1

Query: 460 SLDDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 281
           S +D +KK RKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA
Sbjct: 36  SSEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 95

Query: 280 QKYFIKVQKNGTSEHVXXXXXXXXXXXXXPQKAIKNAPVLSQVIGAVQSSSAMLEPGFVM 101
           QKYF+KVQKNGTSEHV             PQKA KNAPV SQ     QSSS +LEPG+ +
Sbjct: 96  QKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNAPVPSQATAPFQSSSCVLEPGYGL 155

Query: 100 RPDSSTMLRNSTTSPAVSSWAPNSIPPVS 14
           R DSS+MLR  T S A+SSWA NS PPV+
Sbjct: 156 RTDSSSMLRTPTPSAAMSSWAHNSFPPVN 184


>ref|XP_002320823.1| predicted protein [Populus trichocarpa] gi|222861596|gb|EEE99138.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  207 bits (526), Expect = 9e-52
 Identities = 105/147 (71%), Positives = 121/147 (82%)
 Frame = -1

Query: 454 DDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQK 275
           +D +KK RKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQK
Sbjct: 69  EDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQK 128

Query: 274 YFIKVQKNGTSEHVXXXXXXXXXXXXXPQKAIKNAPVLSQVIGAVQSSSAMLEPGFVMRP 95
           YF+KVQK+GTSEHV             PQKA K+A V SQV G+ QSSSA+LEPG++ RP
Sbjct: 129 YFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKSAAVASQVTGSFQSSSALLEPGYLYRP 188

Query: 94  DSSTMLRNSTTSPAVSSWAPNSIPPVS 14
           DS+++L N  TS A+S+W+ NS+PPVS
Sbjct: 189 DSTSVLGNPITSGALSTWSFNSVPPVS 215


>ref|XP_003535596.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor ASG4-like
           [Glycine max]
          Length = 314

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/151 (66%), Positives = 117/151 (77%)
 Frame = -1

Query: 460 SLDDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 281
           S +D +KKTRKPYTITKSRESWTE EHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA
Sbjct: 36  SFEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 95

Query: 280 QKYFIKVQKNGTSEHVXXXXXXXXXXXXXPQKAIKNAPVLSQVIGAVQSSSAMLEPGFVM 101
           QKYF+KVQK+GTSEH+             PQKA KN PVLSQV G+ QSSSA+LEPG+++
Sbjct: 96  QKYFLKVQKSGTSEHLPPPRPKRKAVHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYIL 155

Query: 100 RPDSSTMLRNSTTSPAVSSWAPNSIPPVSHV 8
           + DSS M + S     VSSW+ N +   ++V
Sbjct: 156 KHDSSAMPKTSIIDTTVSSWSNNYLQKTTNV 186


>ref|XP_003556126.1| PREDICTED: transcription factor ASG4 [Glycine max]
          Length = 304

 Score =  199 bits (505), Expect = 2e-49
 Identities = 101/151 (66%), Positives = 118/151 (78%)
 Frame = -1

Query: 460 SLDDLSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 281
           S +D +KKTRKPYTITKSRESWTE EHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA
Sbjct: 37  SFEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHA 96

Query: 280 QKYFIKVQKNGTSEHVXXXXXXXXXXXXXPQKAIKNAPVLSQVIGAVQSSSAMLEPGFVM 101
           QKYF+KVQK+GT+EH+             PQKA K APVLSQV G+ QSSSA+LEPG+++
Sbjct: 97  QKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKTAPVLSQVSGSFQSSSALLEPGYIL 156

Query: 100 RPDSSTMLRNSTTSPAVSSWAPNSIPPVSHV 8
           + DSS M +    + AVSSW+ NS+   + V
Sbjct: 157 KHDSSAMPKTPIINTAVSSWSNNSLQKTTSV 187


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