BLASTX nr result

ID: Coptis25_contig00007878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007878
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79395.1| hypothetical protein VITISV_010430 [Vitis vinifera]    55   2e-11
ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203...    50   3e-10
emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera]    50   2e-09
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]       42   2e-08
emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]    55   1e-06

>emb|CAN79395.1| hypothetical protein VITISV_010430 [Vitis vinifera]
          Length = 391

 Score = 55.5 bits (132), Expect(2) = 2e-11
 Identities = 22/53 (41%), Positives = 35/53 (66%)
 Frame = -2

Query: 163 KTPFQIVYSKLPNHKLDLVSLPSLHNSRVMADEMIDPLAKLHATVKKNLETTN 5
           KTPF++VY+ +P H +DL+ LP  H+     +E  +P+ +++  VKKNLE  N
Sbjct: 224 KTPFEVVYTSVPRHTMDLIRLPLSHDVNPNTEEFAEPIQQIYQEVKKNLEKVN 276



 Score = 37.7 bits (86), Expect(2) = 2e-11
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -3

Query: 255 TLRNLI*RHSGETPLQWDLALTQAEFAYNSSKHH 154
           TL N+I   SG+   QWD AL Q EFA+NS  +H
Sbjct: 187 TLGNMILSXSGDKLKQWDAALPQIEFAFNSMPNH 220


>ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus]
          Length = 1406

 Score = 50.4 bits (119), Expect(2) = 3e-10
 Identities = 22/53 (41%), Positives = 36/53 (67%)
 Frame = -2

Query: 163  KTPFQIVYSKLPNHKLDLVSLPSLHNSRVMADEMIDPLAKLHATVKKNLETTN 5
            K+PF++VY+ LP    DL +LPS+ +  + A+ M++ ++KLH  VK +LE  N
Sbjct: 1333 KSPFEVVYTSLPRVTFDLANLPSVVDVSMEAEAMVERISKLHQEVKSHLELAN 1385



 Score = 38.9 bits (89), Expect(2) = 3e-10
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = -3

Query: 255  TLRNLI*RHSGETPLQWDLALTQAEFAYN 169
            TL NLI   SG+ P QWDLAL QAEF +N
Sbjct: 1296 TLGNLIRCLSGDKPKQWDLALPQAEFTFN 1324


>emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera]
          Length = 605

 Score = 49.7 bits (117), Expect(2) = 2e-09
 Identities = 20/50 (40%), Positives = 33/50 (66%)
 Frame = -2

Query: 163 KTPFQIVYSKLPNHKLDLVSLPSLHNSRVMADEMIDPLAKLHATVKKNLE 14
           KTPF++VY+ +P H +DL+ LP  H+     +E ++ +  ++  VKKNLE
Sbjct: 541 KTPFEVVYASVPRHIVDLIRLPLSHDVNPNVEEFVERIQHIYQEVKKNLE 590



 Score = 37.0 bits (84), Expect(2) = 2e-09
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = -3

Query: 255 TLRNLI*RHSGETPLQWDLALTQAEFAYNSSKHH 154
           TL N+I   +G+ P QW  AL Q EFA+NS  +H
Sbjct: 504 TLSNVIRSVNGDKPKQWGAALPQIEFAFNSMPNH 537


>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
          Length = 962

 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = -3

Query: 255 TLRNLI*RHSGETPLQWDLALTQAEFAYNSSKH 157
           TL NLI   SG  P QWDLAL QAEFA+N+ K+
Sbjct: 237 TLGNLIRCLSGSKPKQWDLALAQAEFAFNNMKN 269



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 18/50 (36%), Positives = 31/50 (62%)
 Frame = -2

Query: 163 KTPFQIVYSKLPNHKLDLVSLPSLHNSRVMADEMIDPLAKLHATVKKNLE 14
           K PF++VY+K P    DL SLP+  ++   A++M++ +  LH  V  +L+
Sbjct: 274 KCPFEVVYTKQPRLTFDLASLPTTIDTSSEAEKMVEKIQNLHEEVHNHLK 323


>emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]
          Length = 866

 Score = 54.7 bits (130), Expect(2) = 1e-06
 Identities = 23/53 (43%), Positives = 35/53 (66%)
 Frame = -2

Query: 163 KTPFQIVYSKLPNHKLDLVSLPSLHNSRVMADEMIDPLAKLHATVKKNLETTN 5
           KTPF++VY+ +P H +DL+ LP  H+    A+E  + + ++H  VKKNLE  N
Sbjct: 706 KTPFEVVYTSVPRHIVDLIRLPLSHDVNPNAEEFAERIQQIHLEVKKNLEKVN 758



 Score = 22.7 bits (47), Expect(2) = 1e-06
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 216 PLQWDLALTQAEFAYNS 166
           P   D+AL Q EFA+NS
Sbjct: 682 PQTEDVALPQIEFAFNS 698


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