BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007876
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540499.1| PREDICTED: ubiquitin domain-containing prote...   125   1e-26
ref|NP_001238246.1| uncharacterized protein LOC100306399 [Glycin...   124   2e-26
ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_002267858.1| PREDICTED: ubiquitin domain-containing prote...   123   4e-26
ref|XP_003596315.1| Ubiquitin domain-containing protein [Medicag...   122   6e-26

>ref|XP_003540499.1| PREDICTED: ubiquitin domain-containing protein 1-like [Glycine max]
          Length = 114

 Score =  125 bits (313), Expect = 1e-26
 Identities = 71/149 (47%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
 Frame = -3

Query: 700 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWXXXXXXXXXXXXXXXXX 524
           MGC GSSQ               W H QPIT TQL ++RDEF                  
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEF------------------ 42

Query: 523 XXXXXXXXXXXXXXDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXAIVDSAGVIVSSAD 344
                            WDTAPHYGGRKEIWD               IVDSAGVIV S+D
Sbjct: 43  -----------------WDTAPHYGGRKEIWDALRAAAEADLTLAQVIVDSAGVIVQSSD 85

Query: 343 LTTCYDERGAKYELPRYVLSEPINLIRES 257
           LT CYDERGAKYELP+YVLSEP NLIR+S
Sbjct: 86  LTVCYDERGAKYELPKYVLSEPTNLIRDS 114


>ref|NP_001238246.1| uncharacterized protein LOC100306399 [Glycine max]
           gi|255628415|gb|ACU14552.1| unknown [Glycine max]
          Length = 114

 Score =  124 bits (310), Expect = 2e-26
 Identities = 71/149 (47%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
 Frame = -3

Query: 700 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWXXXXXXXXXXXXXXXXX 524
           MGC GSSQ               W H QPIT TQL ++RDEF                  
Sbjct: 1   MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEF------------------ 42

Query: 523 XXXXXXXXXXXXXXDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXAIVDSAGVIVSSAD 344
                            WDTAPHYGGRKEIWD              AIVDSAGVIV S+D
Sbjct: 43  -----------------WDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSD 85

Query: 343 LTTCYDERGAKYELPRYVLSEPINLIRES 257
           LT CYDERGAKYELP+YVLSEP NLIR++
Sbjct: 86  LTVCYDERGAKYELPKYVLSEPTNLIRDT 114


>ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|222860514|gb|EEE98061.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  123 bits (309), Expect = 3e-26
 Identities = 72/149 (48%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
 Frame = -3

Query: 700 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWXXXXXXXXXXXXXXXXX 524
           MGC GSSQ               W H QPIT +QL +MRDEF                  
Sbjct: 1   MGCAGSSQAKSDGNVKKIRKPKPWKHPQPITKSQLMQMRDEF------------------ 42

Query: 523 XXXXXXXXXXXXXXDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXAIVDSAGVIVSSAD 344
                            WDTAPHYGGRKEIWD              AIVDSAGVIV +AD
Sbjct: 43  -----------------WDTAPHYGGRKEIWDALRAAADAELSLAQAIVDSAGVIVQNAD 85

Query: 343 LTTCYDERGAKYELPRYVLSEPINLIRES 257
           LT CYDERGAKYELP+YVLSEP NLIRE+
Sbjct: 86  LTICYDERGAKYELPKYVLSEPTNLIRET 114


>ref|XP_002267858.1| PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera]
           gi|297740542|emb|CBI30724.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  123 bits (308), Expect = 4e-26
 Identities = 71/149 (47%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
 Frame = -3

Query: 700 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWXXXXXXXXXXXXXXXXX 524
           MGC GSS+               W HSQ +T TQL +MRDEF                  
Sbjct: 1   MGCTGSSRAKGDESSKKIRRPKPWKHSQALTRTQLKQMRDEF------------------ 42

Query: 523 XXXXXXXXXXXXXXDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXAIVDSAGVIVSSAD 344
                            WDTAPHYGG+KEIWD              AIVDSAGVIV SAD
Sbjct: 43  -----------------WDTAPHYGGQKEIWDALRAATEADLTLAQAIVDSAGVIVQSAD 85

Query: 343 LTTCYDERGAKYELPRYVLSEPINLIRES 257
           LTTCYDERGAKYELP+YVLSEP NLIR++
Sbjct: 86  LTTCYDERGAKYELPKYVLSEPTNLIRDN 114


>ref|XP_003596315.1| Ubiquitin domain-containing protein [Medicago truncatula]
           gi|355485363|gb|AES66566.1| Ubiquitin domain-containing
           protein [Medicago truncatula]
           gi|388514353|gb|AFK45238.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  122 bits (307), Expect = 6e-26
 Identities = 71/149 (47%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
 Frame = -3

Query: 700 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWXXXXXXXXXXXXXXXXX 524
           MGC GSSQ               W H QPIT TQL ++RDEF                  
Sbjct: 1   MGCAGSSQAKADGTVKKIRKPKPWKHPQPITKTQLIQLRDEF------------------ 42

Query: 523 XXXXXXXXXXXXXXDEFWDTAPHYGGRKEIWDXXXXXXXXXXXXXXAIVDSAGVIVSSAD 344
                            WDTAPHYGGRKEIWD              AIVDSAGVIV S+D
Sbjct: 43  -----------------WDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSSD 85

Query: 343 LTTCYDERGAKYELPRYVLSEPINLIRES 257
           LT CYDERGAKYELP+YVLSEP N+I+ES
Sbjct: 86  LTVCYDERGAKYELPKYVLSEPTNMIQES 114