BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007872
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   285   9e-75
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   285   1e-74
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   284   1e-74
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   271   1e-70
ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containi...   270   4e-70

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  285 bits (729), Expect = 9e-75
 Identities = 139/275 (50%), Positives = 196/275 (71%)
 Frame = -3

Query: 825 IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 646
           +EKAEA+MQ+M+ +GF ++  SYNV+L LYS++G+++KL+ L++EM+ENG+  +  T  I
Sbjct: 152 LEKAEAIMQEMRDMGFVKT-LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCI 210

Query: 645 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEKALQMLKSLEKL 466
           ++ AY A S+++GMEK+L  +E +P +  DW +Y  AA GY+K  L EKA++MLK  E+ 
Sbjct: 211 RLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQF 270

Query: 465 IVGKQGRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 286
           I G+  R  Y+ LLT+YA    +K ++YRIW LYK+  K  NT +++M+SSLL+LDD+DG
Sbjct: 271 ISGRSRRFGYEILLTLYA-TMGNKTEVYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDG 329

Query: 285 AEKILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLAT 106
           AEK  +EW S + +FDFRVPNLLI AYCK G LEKAE+L++  IE+GE+P   +WD LA 
Sbjct: 330 AEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAA 389

Query: 105 SYVEANQFPKALKALESAFLARWPKWTPNRDTLSA 1
            Y E NQ  KA+  L+ A LA    W PN  TLSA
Sbjct: 390 GYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSA 424


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  285 bits (728), Expect = 1e-74
 Identities = 133/274 (48%), Positives = 197/274 (71%)
 Frame = -3

Query: 825 IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 646
           ++KAEA+MQ+++ LGF R+   YN L+N+Y ++G ++KL+ L+ EM+E G+  +K T++I
Sbjct: 165 VDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAI 224

Query: 645 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEKALQMLKSLEKL 466
           +++AYAA SNI G++ I+  ME +P II+DW SYA  A GY+KVGL++K L M+K LE+L
Sbjct: 225 RLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEEL 284

Query: 465 IVGKQGRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 286
           I  K   VA+D LL +YA  +  +++L R+W LYK  EK+ N  +++MISSLL+ DDID 
Sbjct: 285 IDAKGSNVAFDNLLKLYA-ETRQRDELDRVWMLYKKKEKIYNKGYMAMISSLLKFDDIDA 343

Query: 285 AEKILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLAT 106
           AEK+L+EWES    +DFRVPN LI AYC+ G  EKAE L+N  + KG  P + +W +LA 
Sbjct: 344 AEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLAN 403

Query: 105 SYVEANQFPKALKALESAFLARWPKWTPNRDTLS 4
            Y+E +Q PKA++AL+ A +   P W P+++TL+
Sbjct: 404 GYLEDSQIPKAVEALKKAVVVCPPNWKPSKNTLA 437


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  284 bits (727), Expect = 1e-74
 Identities = 139/275 (50%), Positives = 195/275 (70%)
 Frame = -3

Query: 825 IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 646
           +EKAEA+MQ+M+ +GF ++  SYNV+L LYS++G+++KL+ L++EM+ENG+  +  T  I
Sbjct: 152 LEKAEAIMQEMRDMGFVKT-LSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCI 210

Query: 645 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEKALQMLKSLEKL 466
           ++ AY A S+++GMEK+L  +E +P +  DW +Y  AA GY+K  L EKA++MLK  E+ 
Sbjct: 211 RLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQF 270

Query: 465 IVGKQGRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 286
           I G+  R  Y+ LLT+YA    +K + YRIW LYK+  K  NT +++M+SSLL+LDD+DG
Sbjct: 271 ISGRSRRFGYEILLTLYA-TMGNKTEXYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDG 329

Query: 285 AEKILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLAT 106
           AEK  +EW S + +FDFRVPNLLI AYCK G LEKAE+L++  IE+GE+P   +WD LA 
Sbjct: 330 AEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAA 389

Query: 105 SYVEANQFPKALKALESAFLARWPKWTPNRDTLSA 1
            Y E NQ  KA+  L+ A LA    W PN  TLSA
Sbjct: 390 GYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSA 424


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  271 bits (694), Expect = 1e-70
 Identities = 132/273 (48%), Positives = 188/273 (68%)
 Frame = -3

Query: 819 KAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSIQM 640
           KAEA MQ+MK LGF ++  SYNV+L+LYS +G Y+KL+ L++EM+ENG+  +++T  I++
Sbjct: 158 KAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRL 217

Query: 639 AAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEKALQMLKSLEKLIV 460
            A   +S+I+GMEK+L  MEV+P I + + +Y  AA GY+K GL++K L MLK  E+LI 
Sbjct: 218 NACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLIS 277

Query: 459 GKQGRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDGAE 280
           G   R AY+FLLT+Y  AS +K ++YRIW  YK   +  N+ ++ MISSLL+LDDIDGAE
Sbjct: 278 GNTRRFAYEFLLTLYT-ASGNKAEVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAE 336

Query: 279 KILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLATSY 100
           +I +EW+S+   FD R+PN ++  Y + GHLEKAE  IN  +  GE+P  +SW+HLA  Y
Sbjct: 337 RIFEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGY 396

Query: 99  VEANQFPKALKALESAFLARWPKWTPNRDTLSA 1
             + Q  KA++ +  A     P W P+  TLSA
Sbjct: 397 HSSGQMTKAVETIRKAISVSKPGWKPSLLTLSA 429


>ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 486

 Score =  270 bits (689), Expect = 4e-70
 Identities = 128/275 (46%), Positives = 193/275 (70%)
 Frame = -3

Query: 825 IEKAEALMQQMKQLGFARSPASYNVLLNLYSKVGQYDKLETLLEEMKENGVRANKLTMSI 646
           ++KAEA+MQ+M+++GF ++P SYN +LNLY+++G+++KL+ L++EM+E G+  N+ T ++
Sbjct: 153 LKKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNV 212

Query: 645 QMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIKVGLIEKALQMLKSLEKL 466
           +M AYAA S+I  MEK+L  ME +P +  DW  Y T   GY K GL E ++ MLK  E+L
Sbjct: 213 RMNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQL 272

Query: 465 IVGKQGRVAYDFLLTMYAGASSSKEDLYRIWKLYKSSEKLNNTSFLSMISSLLELDDIDG 286
           I  KQ  +AY +L+T+YA A  +K+++YR+W LY + +K  N+ +L +ISSL++LDDIDG
Sbjct: 273 IGDKQKWLAYQYLMTLYA-AIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDG 331

Query: 285 AEKILKEWESEHTYFDFRVPNLLIAAYCKNGHLEKAEKLINMTIEKGEKPFLSSWDHLAT 106
           AE+ILKEWES  T FDF++PN++I +YC  G ++KAE  I+  IE G++P   +WD LA+
Sbjct: 332 AERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLAS 391

Query: 105 SYVEANQFPKALKALESAFLARWPKWTPNRDTLSA 1
            Y       KA + L+ A     P+W PN D L+A
Sbjct: 392 GYHSNGLTNKAAETLKKAISVSPPRWKPNYDILAA 426