BLASTX nr result

ID: Coptis25_contig00007861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007861
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326633.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002533423.1| Urease accessory protein ureD, putative [Ric...    67   2e-09
emb|CAC85464.1| putative urease accessory protein D [Solanum lyc...    66   3e-09
dbj|BAH19312.1| urease accessory protein ureD [Morus alba]             65   8e-09
ref|XP_002276068.1| PREDICTED: urease accessory protein UreD [Vi...    63   3e-08

>ref|XP_002326633.1| predicted protein [Populus trichocarpa] gi|222833955|gb|EEE72432.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = +2

Query: 2   GCKKRKSFGQTKPDMIVSCSAFGPKGTGGVA*ISTITTESVYRILHLQLASMDPLLGASP 181
           GC +  S   TKP  I SCS FGPKG G +  ++ +TTESVY+ L  QL  M+PL+G  P
Sbjct: 233 GCAQSNSRHFTKPSFIASCSVFGPKGIGVIVRVAAMTTESVYKFLQHQLVGMEPLIGVLP 292

Query: 182 YH 187
           YH
Sbjct: 293 YH 294


>ref|XP_002533423.1| Urease accessory protein ureD, putative [Ricinus communis]
           gi|223526736|gb|EEF28966.1| Urease accessory protein
           ureD, putative [Ricinus communis]
          Length = 294

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/59 (57%), Positives = 38/59 (64%)
 Frame = +2

Query: 8   KKRKSFGQTKPDMIVSCSAFGPKGTGGVA*ISTITTESVYRILHLQLASMDPLLGASPY 184
           K   S   TKP  I SCS FGPKG G V  I+ +TTESVYR L  QLA M+PL+G  PY
Sbjct: 235 KSNSSTFFTKPPFIASCSLFGPKGIGIVVRIAAMTTESVYRFLQHQLADMEPLIGVLPY 293


>emb|CAC85464.1| putative urease accessory protein D [Solanum lycopersicum]
          Length = 297

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = +2

Query: 32  TKPDMIVSCSAFGPKGTGGVA*ISTITTESVYRILHLQLASMDPLLGASPY 184
           TKP  + SCS FGPKG G V  I+ +TTESVY  L  QL+SM+PLLG  PY
Sbjct: 243 TKPSFLASCSIFGPKGIGVVTRIAAMTTESVYNFLQHQLSSMEPLLGVKPY 293


>dbj|BAH19312.1| urease accessory protein ureD [Morus alba]
          Length = 304

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = +2

Query: 8   KKRKSFGQTKPDMIVSCSAFGPKGTGGVA*ISTITTESVYRILHLQLASMDPLLGASPYH 187
           K+  ++   KP+ IVS S FGP+G G V  I   TTESVY  L  QLA ++PLLG SPYH
Sbjct: 245 KRSSTYCTNKPNFIVSSSVFGPQGKGVVVRIVATTTESVYTFLQHQLAGLEPLLGLSPYH 304


>ref|XP_002276068.1| PREDICTED: urease accessory protein UreD [Vitis vinifera]
           gi|297738000|emb|CBI27201.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/50 (62%), Positives = 33/50 (66%)
 Frame = +2

Query: 35  KPDMIVSCSAFGPKGTGGVA*ISTITTESVYRILHLQLASMDPLLGASPY 184
           KP  I SCS FGPKG G V  I+  TTESVY  L  QLA M+PLLG  PY
Sbjct: 241 KPTFIASCSPFGPKGIGVVVRIAATTTESVYSFLRHQLAGMEPLLGVPPY 290


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