BLASTX nr result

ID: Coptis25_contig00007857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007857
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O50044.1|KDSA_PEA RecName: Full=2-dehydro-3-deoxyphosphoocton...   505   e-141
ref|XP_003624281.1| 2-dehydro-3-deoxyphosphooctonate aldolase [M...   502   e-140
ref|NP_001066401.1| Os12g0210800 [Oryza sativa Japonica Group] g...   496   e-138
ref|XP_002300891.1| predicted protein [Populus trichocarpa] gi|1...   496   e-138
gb|AAM47465.1| AT5g09730/F17I14_80 [Arabidopsis thaliana]             496   e-138

>sp|O50044.1|KDSA_PEA RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; AltName:
            Full=3-deoxy-D-manno-octulosonic acid 8-phosphate
            synthase; AltName: Full=KDO-8-phosphate synthase;
            Short=KDO 8-P synthase; Short=KDOPS; AltName:
            Full=Phospho-2-dehydro-3-deoxyoctonate aldolase
            gi|2695861|emb|CAA74644.1|
            3-deoxy-D-manno-2-octulosonate-8-phosphate synthase
            [Pisum sativum] gi|2695863|emb|CAA74645.1|
            3-deoxy-D-manno-2-octulosonate-8-phosphate synthase
            [Pisum sativum]
          Length = 290

 Score =  505 bits (1301), Expect = e-141
 Identities = 245/288 (85%), Positives = 269/288 (93%)
 Frame = -3

Query: 1063 MDSSTILYNRLKNSEPFFLLAGPNVIESEDHIFRMAKHIKAITSKLGLPLVFKSSFDKAN 884
            MD S +LYN+LK ++PFFLLAGPNVIESE+HI RMAKHIK I+SK G+PL+FKSSFDKAN
Sbjct: 1    MDPSVLLYNQLKAADPFFLLAGPNVIESEEHIMRMAKHIKTISSKFGIPLIFKSSFDKAN 60

Query: 883  RTSSQSFRGPGIEQGLQILEKVKLAYDIPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 704
            RTSS+SFRGPGI +GL+ILEKVK+AYDIPIVTDVHE+SQCE VG+VADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGIVEGLKILEKVKIAYDIPIVTDVHEASQCEPVGRVADIIQIPAFLCRQT 120

Query: 703  DLLIAAAKTGKIVNIKKGQFCAPSVMANSAEKVRLSGNQNVMVCERGTMFGYNDLIVDPR 524
            DLL+AAAKTGKI+NIKKGQFCAPSVMANSAEKVRL+GN NVMVCERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAKTGKIINIKKGQFCAPSVMANSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 523  NLEWMREANCPIVADITHALQQPAGRKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME 344
            NLEWMREANCP+VADITH+LQQPAG+KLDGGGVASGGLRELIPCIARTSVAVGVDGIFME
Sbjct: 181  NLEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME 240

Query: 343  VHDDPLHAPVDGPTQWPLRHXXXXXXXLMAIARVSKGKRQFKIDLAPF 200
            VHDDPL+APVDGPTQWPLRH       L+AI+RVSKGK+ F IDL PF
Sbjct: 241  VHDDPLNAPVDGPTQWPLRHLEELLEELIAISRVSKGKKPFNIDLTPF 288


>ref|XP_003624281.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Medicago truncatula]
            gi|355499296|gb|AES80499.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Medicago
            truncatula]
          Length = 290

 Score =  502 bits (1293), Expect = e-140
 Identities = 244/288 (84%), Positives = 269/288 (93%)
 Frame = -3

Query: 1063 MDSSTILYNRLKNSEPFFLLAGPNVIESEDHIFRMAKHIKAITSKLGLPLVFKSSFDKAN 884
            MD S +LYN+LK + PFFLLAGPNVIESE+HI +MAKHIKAI+SK G+PLVFKSSFDKAN
Sbjct: 1    MDPSALLYNQLKAAHPFFLLAGPNVIESEEHIMKMAKHIKAISSKFGIPLVFKSSFDKAN 60

Query: 883  RTSSQSFRGPGIEQGLQILEKVKLAYDIPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 704
            RTSS+SFRGPG+ +GL+ILEKVK+AYDIPIVTDVHE+SQCEAVG+VADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMVEGLKILEKVKVAYDIPIVTDVHEASQCEAVGRVADIIQIPAFLCRQT 120

Query: 703  DLLIAAAKTGKIVNIKKGQFCAPSVMANSAEKVRLSGNQNVMVCERGTMFGYNDLIVDPR 524
            DLL+AAA+TGKI+NIKKGQFCAPSVMANSAEKVRL+GN NVMVCERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAQTGKIINIKKGQFCAPSVMANSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 523  NLEWMREANCPIVADITHALQQPAGRKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME 344
            NLEW+REANCP+VADITH+LQQPAG+KLDGGGVASGGLRELIPCIARTSVAVGVDGIFME
Sbjct: 181  NLEWLREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME 240

Query: 343  VHDDPLHAPVDGPTQWPLRHXXXXXXXLMAIARVSKGKRQFKIDLAPF 200
            VHDDPL APVDGPTQWPLRH       L+AI+RVSKGK+ F IDL PF
Sbjct: 241  VHDDPLSAPVDGPTQWPLRHLEELLEELIAISRVSKGKKPFNIDLTPF 288


>ref|NP_001066401.1| Os12g0210800 [Oryza sativa Japonica Group]
            gi|108862327|gb|ABG21917.1|
            2-dehydro-3-deoxyphosphooctonate aldolase, putative,
            expressed [Oryza sativa Japonica Group]
            gi|108862328|gb|ABG21918.1|
            2-dehydro-3-deoxyphosphooctonate aldolase, putative,
            expressed [Oryza sativa Japonica Group]
            gi|113648908|dbj|BAF29420.1| Os12g0210800, partial [Oryza
            sativa Japonica Group]
          Length = 291

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/289 (83%), Positives = 269/289 (93%), Gaps = 1/289 (0%)
 Frame = -3

Query: 1063 MDSSTI-LYNRLKNSEPFFLLAGPNVIESEDHIFRMAKHIKAITSKLGLPLVFKSSFDKA 887
            MD+S++ LY +LK ++PFFLLAGPNVIESE+H+ +MAKHIK IT+KLGLPLVFKSSFDKA
Sbjct: 1    MDASSVALYGQLKAAQPFFLLAGPNVIESEEHVLKMAKHIKGITTKLGLPLVFKSSFDKA 60

Query: 886  NRTSSQSFRGPGIEQGLQILEKVKLAYDIPIVTDVHESSQCEAVGKVADIIQIPAFLCRQ 707
            NRTSS+SFRGPG+E+GL+ILEKVK  YDIP+VTDVHES QCEAVG+VADIIQIPAFLCRQ
Sbjct: 61   NRTSSKSFRGPGLEEGLKILEKVKATYDIPVVTDVHESHQCEAVGRVADIIQIPAFLCRQ 120

Query: 706  TDLLIAAAKTGKIVNIKKGQFCAPSVMANSAEKVRLSGNQNVMVCERGTMFGYNDLIVDP 527
            TDLL+AAAKTGKI+NIKKGQFCAPSVMANSAEK+RL+GNQNVMVCERGTMFGYNDLIVDP
Sbjct: 121  TDLLVAAAKTGKIINIKKGQFCAPSVMANSAEKIRLAGNQNVMVCERGTMFGYNDLIVDP 180

Query: 526  RNLEWMREANCPIVADITHALQQPAGRKLDGGGVASGGLRELIPCIARTSVAVGVDGIFM 347
            RN EW+REANCP+VAD+THALQQPAG+KLDGGGVASGGLRELIPCIARTSVAVGVDGIFM
Sbjct: 181  RNFEWLREANCPVVADVTHALQQPAGKKLDGGGVASGGLRELIPCIARTSVAVGVDGIFM 240

Query: 346  EVHDDPLHAPVDGPTQWPLRHXXXXXXXLMAIARVSKGKRQFKIDLAPF 200
            EVHDDPL+AP DGPTQWPLR+       L+AIARV+KGK+  KIDL PF
Sbjct: 241  EVHDDPLNAPCDGPTQWPLRNLEELLEELIAIARVTKGKKPLKIDLTPF 289


>ref|XP_002300891.1| predicted protein [Populus trichocarpa] gi|118484126|gb|ABK93946.1|
            unknown [Populus trichocarpa] gi|222842617|gb|EEE80164.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  496 bits (1277), Expect = e-138
 Identities = 239/288 (82%), Positives = 269/288 (93%)
 Frame = -3

Query: 1063 MDSSTILYNRLKNSEPFFLLAGPNVIESEDHIFRMAKHIKAITSKLGLPLVFKSSFDKAN 884
            MDSST+L+N+LK +EPFFLLAGPNVIESE+HI RMA H+K I++++GLPLVFKSSFDKAN
Sbjct: 1    MDSSTVLFNQLKAAEPFFLLAGPNVIESEEHILRMANHLKTISTRVGLPLVFKSSFDKAN 60

Query: 883  RTSSQSFRGPGIEQGLQILEKVKLAYDIPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 704
            RTSS+SFRGPG+ +GL+ILEKVK+AYDIPIVTDVHE+ QCE VG+VADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMSEGLKILEKVKIAYDIPIVTDVHETIQCEPVGQVADIIQIPAFLCRQT 120

Query: 703  DLLIAAAKTGKIVNIKKGQFCAPSVMANSAEKVRLSGNQNVMVCERGTMFGYNDLIVDPR 524
            DLL+AAAKTGKI+NIKKGQFCAPSVM+NSAEKVRL+GN NVMVCERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAKTGKIINIKKGQFCAPSVMSNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 523  NLEWMREANCPIVADITHALQQPAGRKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME 344
            NLEW+REA CP+VADITH+LQQPAG+KLDGGGVASGGLRELIPCIART+VAVGVDGIFME
Sbjct: 181  NLEWIREAKCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFME 240

Query: 343  VHDDPLHAPVDGPTQWPLRHXXXXXXXLMAIARVSKGKRQFKIDLAPF 200
            VHDDPL+APVDGPTQWPLRH       L+AIA+VSKGK+Q  IDL PF
Sbjct: 241  VHDDPLNAPVDGPTQWPLRHLEELLEELVAIAKVSKGKKQMAIDLTPF 288


>gb|AAM47465.1| AT5g09730/F17I14_80 [Arabidopsis thaliana]
          Length = 290

 Score =  496 bits (1276), Expect = e-138
 Identities = 239/288 (82%), Positives = 270/288 (93%)
 Frame = -3

Query: 1063 MDSSTILYNRLKNSEPFFLLAGPNVIESEDHIFRMAKHIKAITSKLGLPLVFKSSFDKAN 884
            M ++++LYN+LK +EPFFLLAGPNVIESE+HI RMAKHIK I++K+GLPLVFKSSFDKAN
Sbjct: 1    MTATSLLYNQLKAAEPFFLLAGPNVIESEEHILRMAKHIKDISTKVGLPLVFKSSFDKAN 60

Query: 883  RTSSQSFRGPGIEQGLQILEKVKLAYDIPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 704
            RTSS+SFRGPG+ +GL+ILEKVK+AYD+PIVTDVHESSQCEAVGKVADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMAEGLKILEKVKVAYDLPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 120

Query: 703  DLLIAAAKTGKIVNIKKGQFCAPSVMANSAEKVRLSGNQNVMVCERGTMFGYNDLIVDPR 524
            DLL+AAA+TGKI+NIKKGQFCAPSVM NSAEK+RL+GN NVMVCERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAQTGKIINIKKGQFCAPSVMENSAEKIRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 523  NLEWMREANCPIVADITHALQQPAGRKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME 344
            N EWMREANCP+VADITH+LQQPAG+KLDGGGVASGGLRELIPCIART+VAVGVDGIFME
Sbjct: 181  NFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFME 240

Query: 343  VHDDPLHAPVDGPTQWPLRHXXXXXXXLMAIARVSKGKRQFKIDLAPF 200
            VHDDPL APVDGPTQWPLRH       L+AIARV+KGK++ +IDL P+
Sbjct: 241  VHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPY 288


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