BLASTX nr result
ID: Coptis25_contig00007843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007843
(2784 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated... 689 0.0
emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera] 689 0.0
ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated... 650 0.0
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2... 645 0.0
ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|2... 641 0.0
>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
[Vitis vinifera]
Length = 528
Score = 689 bits (1779), Expect = 0.0
Identities = 342/520 (65%), Positives = 412/520 (79%), Gaps = 1/520 (0%)
Frame = +3
Query: 54 MAE-NQIQTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKFQEITNLIYPITSLSFSPTSPH 230
MAE Q ++T+PV+ + YW S+K I NLI ITSLSFSP +PH
Sbjct: 1 MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH 60
Query: 231 NFITSFSASLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKTR 410
+F ++S SLTL+N++T+EPIS+ SSF D+ +FRSDG L+AA +GLVQVFDVKTR
Sbjct: 61 HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR 120
Query: 411 LALRKLRGHSRPVRFVSYPCFDKLHLFSGGDDSLVKYWDVASEMQLLNFQGHKDYVRCGS 590
ALRKLRGH+RPVR V YP DKLHLFSGGDD++VKYWDVA+E ++ F+GHKDYVRCG
Sbjct: 121 TALRKLRGHTRPVRLVRYPRSDKLHLFSGGDDAVVKYWDVAAESGVVEFRGHKDYVRCGD 180
Query: 591 ASPGSSELFATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGN 770
SP SSELFATGSYDHTVK+WD R S++ M+ NHGKPVEDV+FLPSGGLIATAGGN
Sbjct: 181 GSPASSELFATGSYDHTVKVWDVRVSNSDA--AMKINHGKPVEDVIFLPSGGLIATAGGN 238
Query: 771 SVKIWDVIGGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYS 950
VKIWDVIGGGKL+Y+ME+HNKTVTS+CVGK+GR+ GE +Q+R++SV LDGYMKVFDYS
Sbjct: 239 CVKIWDVIGGGKLLYSMENHNKTVTSICVGKIGRDGGEGSEQYRVLSVGLDGYMKVFDYS 298
Query: 951 ALKLTHSMRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSS 1130
K+THSMRFP PLLSIGFSPDC+TR IGTSNGVIY GKRK K VESG+ E
Sbjct: 299 KFKITHSMRFPAPLLSIGFSPDCATRAIGTSNGVIYAGKRKVK--GEVESGLREFPSLGL 356
Query: 1131 VPEPQKQVLRPNNFRYFSRGQNEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSAL 1310
+ EPQ++VLRP+ FRYF R Q EKPS+ D++I RP+K K AEHDKLL+KFRHK+A VSAL
Sbjct: 357 MEEPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPKKVKIAEHDKLLKKFRHKDAFVSAL 416
Query: 1311 NRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKV 1490
+ K P +V+AV+EELVAR+KLLKCVSNLD EELGLL+ FLH+++T+P Y+G L+G TKKV
Sbjct: 417 SGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGLTKKV 476
Query: 1491 LQMHAEDVNASDVLKWHVRQLKLSVEEEIHTHQSLQEIQG 1610
+QM AED+ ASDVLK H+R LK SVEEE+ QSLQEIQG
Sbjct: 477 VQMRAEDIIASDVLKGHIRNLKRSVEEEVRIQQSLQEIQG 516
>emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
Length = 570
Score = 689 bits (1779), Expect = 0.0
Identities = 342/520 (65%), Positives = 412/520 (79%), Gaps = 1/520 (0%)
Frame = +3
Query: 54 MAE-NQIQTKTYPVQTRXXXXXXXXXXXXXXXYWRSYKFQEITNLIYPITSLSFSPTSPH 230
MAE Q ++T+PV+ + YW S+K I NLI ITSLSFSP +PH
Sbjct: 1 MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH 60
Query: 231 NFITSFSASLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKTR 410
+F ++S SLTL+N++T+EPIS+ SSF D+ +FRSDG L+AA +GLVQVFDVKTR
Sbjct: 61 HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR 120
Query: 411 LALRKLRGHSRPVRFVSYPCFDKLHLFSGGDDSLVKYWDVASEMQLLNFQGHKDYVRCGS 590
ALRKLRGH+RPVR V YP DKLHLFSGGDD++VKYWDVA+E ++ F+GHKDYVRCG
Sbjct: 121 TALRKLRGHTRPVRLVRYPRSDKLHLFSGGDDAVVKYWDVAAESGVVEFRGHKDYVRCGD 180
Query: 591 ASPGSSELFATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGN 770
SP SSELFATGSYDHTVK+WD R S++ M+ NHGKPVEDV+FLPSGGLIATAGGN
Sbjct: 181 GSPASSELFATGSYDHTVKVWDVRVSNSDA--AMKINHGKPVEDVIFLPSGGLIATAGGN 238
Query: 771 SVKIWDVIGGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYS 950
VKIWDVIGGGKL+Y+ME+HNKTVTS+CVGK+GR+ GE +Q+R++SV LDGYMKVFDYS
Sbjct: 239 CVKIWDVIGGGKLLYSMENHNKTVTSICVGKIGRDGGEGSEQYRVLSVGLDGYMKVFDYS 298
Query: 951 ALKLTHSMRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSS 1130
K+THSMRFP PLLSIGFSPDC+TR IGTSNGVIY GKRK K VESG+ E
Sbjct: 299 KFKITHSMRFPAPLLSIGFSPDCATRAIGTSNGVIYAGKRKVK--GEVESGLREFPSLGL 356
Query: 1131 VPEPQKQVLRPNNFRYFSRGQNEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSAL 1310
+ EPQ++VLRP+ FRYF R Q EKPS+ D++I RP+K K AEHDKLL+KFRHK+A VSAL
Sbjct: 357 MEEPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPKKVKIAEHDKLLKKFRHKDAFVSAL 416
Query: 1311 NRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKV 1490
+ K P +V+AV+EELVAR+KLLKCVSNLD EELGLL+ FLH+++T+P Y+G L+G TKKV
Sbjct: 417 SGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGLTKKV 476
Query: 1491 LQMHAEDVNASDVLKWHVRQLKLSVEEEIHTHQSLQEIQG 1610
+QM AED+ ASDVLK H+R LK SVEEE+ QSLQEIQG
Sbjct: 477 VQMRAEDIIASDVLKGHIRNLKRSVEEEVRIQQSLQEIQG 516
>ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
[Cucumis sativus] gi|449528790|ref|XP_004171386.1|
PREDICTED: U3 small nucleolar RNA-associated protein 15
homolog [Cucumis sativus]
Length = 528
Score = 650 bits (1678), Expect = 0.0
Identities = 320/513 (62%), Positives = 399/513 (77%), Gaps = 1/513 (0%)
Frame = +3
Query: 75 TKTYPVQTRXXXXXXXXXXXXXXXYWRSYKFQEITNLIYPITSLSFSPTSPHNFITSFSA 254
T+T+PV+ + YW S+K EI NL+ ++S++FSPT+P F + SA
Sbjct: 10 TRTFPVKPKLKSKPRTPKQTPESKYWSSFKRHEIPNLLSSVSSIAFSPTNPSIFCATHSA 69
Query: 255 SLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKTRLALRKLRG 434
SLTL++AQT+ P ST SSF D+ +FR DG L+AA +GLVQVFDVKTR LRKLR
Sbjct: 70 SLTLFSAQTMAPTSTISSFRDVVSCASFRCDGLLIAASDLSGLVQVFDVKTRTPLRKLRS 129
Query: 435 HSRPVRFVSYPCFDKLHLFSGGDDSLVKYWDVASEMQLLNFQGHKDYVRCGSASPGSSEL 614
HSRPV+FV YP DKLHL SGGDD++VKYWDVAS+ + +F GHKDYVRCG+ SP S ++
Sbjct: 130 HSRPVQFVQYPVLDKLHLVSGGDDAVVKYWDVASQTPISDFLGHKDYVRCGACSPASMDM 189
Query: 615 FATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGNSVKIWDVI 794
F TGSYDHTVK+WD+RT+S K V+E NHGKPVEDV+FLPSGGL+ATAGGNSVKIWDVI
Sbjct: 190 FITGSYDHTVKLWDARTNS---KSVLEVNHGKPVEDVIFLPSGGLVATAGGNSVKIWDVI 246
Query: 795 GGGKLVYTMESHNKTVTSLCVG-KLGRNEGEEYDQFRLMSVSLDGYMKVFDYSALKLTHS 971
GGGK+V +MESHNKTVTSLCVG KLG++ GEE DQFR++SV+LDGYMKVFDYS +K+THS
Sbjct: 247 GGGKMVCSMESHNKTVTSLCVGKKLGQDSGEESDQFRILSVALDGYMKVFDYSKMKVTHS 306
Query: 972 MRFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSSVPEPQKQ 1151
MRFP PL+S+GFSPDCSTRV+GTSNG++Y GKRK KE+ + + +V EPQ++
Sbjct: 307 MRFPTPLMSVGFSPDCSTRVVGTSNGILYAGKRKTKESET--TNLSNPWSLGTVGEPQRR 364
Query: 1152 VLRPNNFRYFSRGQNEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSALNRKEPRS 1331
VLRP++FRYF RGQ EKPS+ D+++ +P+K K EHD LL+KFRHK+ALVS L + P +
Sbjct: 365 VLRPSHFRYFHRGQGEKPSEGDYLVMKPKKVKLTEHDNLLKKFRHKDALVSVLASRNPEN 424
Query: 1332 VMAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAED 1511
V+AV+EELVAR+KLLKCV+NLD EELG L+ FL KY+T+P YS L+G T+KV+++ +ED
Sbjct: 425 VVAVMEELVARKKLLKCVTNLDREELGSLLGFLQKYSTLPRYSNLLMGLTRKVVELRSED 484
Query: 1512 VNASDVLKWHVRQLKLSVEEEIHTHQSLQEIQG 1610
V A LK HVR LK SVEEEI QSL EIQG
Sbjct: 485 VRAYGALKDHVRNLKRSVEEEIRIQQSLLEIQG 517
>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
predicted protein [Populus trichocarpa]
Length = 534
Score = 645 bits (1664), Expect = 0.0
Identities = 316/512 (61%), Positives = 391/512 (76%)
Frame = +3
Query: 75 TKTYPVQTRXXXXXXXXXXXXXXXYWRSYKFQEITNLIYPITSLSFSPTSPHNFITSFSA 254
+KT+P + + YW S+K +I+NLI I S+ FSP SPH F + SA
Sbjct: 15 SKTFPTKPKLKPKAKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHQFAAANSA 74
Query: 255 SLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKTRLALRKLRG 434
SLTL+++QT+ P ST S F+D+ S +FR DG L+AA +GL++VFDVKTR LR+L+
Sbjct: 75 SLTLFSSQTLSPTSTIS-FSDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRTPLRRLKS 133
Query: 435 HSRPVRFVSYPCFDKLHLFSGGDDSLVKYWDVASEMQLLNFQGHKDYVRCGSASPGSSEL 614
H+RPVRFV YP DKLHL SGGDDS+VKYWDVA E + + GH+DY RCG SP + E+
Sbjct: 134 HTRPVRFVKYPLLDKLHLVSGGDDSVVKYWDVAGESVVSDLYGHRDYARCGDCSPINGEI 193
Query: 615 FATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGNSVKIWDVI 794
F TGSYDHTVK+WD R S V+E NHGKPVEDV+FLPSGG++ATAGGNS+KIWD+I
Sbjct: 194 FVTGSYDHTVKLWDVRVDSKES--VIEVNHGKPVEDVIFLPSGGMVATAGGNSLKIWDLI 251
Query: 795 GGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYSALKLTHSM 974
GGGK+VY+MESHNKTVTS+CVGK+G+ GEE Q+R++SV+LDGYMKVFDY+ +K+THSM
Sbjct: 252 GGGKMVYSMESHNKTVTSICVGKVGKESGEEALQYRILSVALDGYMKVFDYAKMKVTHSM 311
Query: 975 RFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSSVPEPQKQV 1154
RFP PL+SIGFSPDC TRVIG+SNG+I+ G+RK KE ES G SV EPQ++
Sbjct: 312 RFPAPLMSIGFSPDCMTRVIGSSNGIIFAGRRKGKEDVG-ESKSGNFWALGSVEEPQRRA 370
Query: 1155 LRPNNFRYFSRGQNEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSALNRKEPRSV 1334
LRP FRYF R Q EKP++ DH+I RP+K K +EHDKLL+KFRHKEALVS L+ K P +V
Sbjct: 371 LRPTYFRYFHRSQGEKPNEGDHLIMRPKKVKLSEHDKLLKKFRHKEALVSVLSGKNPENV 430
Query: 1335 MAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAEDV 1514
+AV+EE+VARRKLLKCV NLD EELGLL+ FLHK++TMP +SG L+G TKKVL+M A+D+
Sbjct: 431 VAVMEEMVARRKLLKCVVNLDEEELGLLLGFLHKHSTMPRHSGLLMGLTKKVLEMRADDI 490
Query: 1515 NASDVLKWHVRQLKLSVEEEIHTHQSLQEIQG 1610
ASD LK H+R LK SVEEEI SLQEIQG
Sbjct: 491 RASDALKSHIRNLKRSVEEEIRIQHSLQEIQG 522
>ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|222861816|gb|EEE99358.1|
predicted protein [Populus trichocarpa]
Length = 534
Score = 641 bits (1654), Expect = 0.0
Identities = 318/512 (62%), Positives = 386/512 (75%)
Frame = +3
Query: 75 TKTYPVQTRXXXXXXXXXXXXXXXYWRSYKFQEITNLIYPITSLSFSPTSPHNFITSFSA 254
+KT+P + + YW S+K +I+NLI I S+ FSP SPH+F + SA
Sbjct: 15 SKTFPTKPKLKSKPKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHHFAAANSA 74
Query: 255 SLTLYNAQTIEPISTFSSFNDIAYSPAFRSDGKLVAAGGETGLVQVFDVKTRLALRKLRG 434
SLTL++ T+ P ST SS +D+ S +FR DG L+AA +GL++VFDVKTR LR+LR
Sbjct: 75 SLTLFSPHTLSPASTISS-SDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRTPLRRLRS 133
Query: 435 HSRPVRFVSYPCFDKLHLFSGGDDSLVKYWDVASEMQLLNFQGHKDYVRCGSASPGSSEL 614
H+RPVRFV YP DKLHL SGGDDS+VKYWDVA E +L+ GH+DYVRCG SP E+
Sbjct: 134 HARPVRFVKYPLLDKLHLVSGGDDSVVKYWDVAGESVVLDLYGHRDYVRCGDCSPTDGEM 193
Query: 615 FATGSYDHTVKIWDSRTSSTSMKYVMEFNHGKPVEDVVFLPSGGLIATAGGNSVKIWDVI 794
F TGSYDHTVK+WD R + V+E NHG PVEDV+FLPSGG++ATAGGNSVKIWD+I
Sbjct: 194 FVTGSYDHTVKLWDVRVDNKES--VIEVNHGNPVEDVIFLPSGGMVATAGGNSVKIWDLI 251
Query: 795 GGGKLVYTMESHNKTVTSLCVGKLGRNEGEEYDQFRLMSVSLDGYMKVFDYSALKLTHSM 974
GGGK+VY+MESHNKTVTS+CVGK+G+ GEE Q+R+ SV+LDGYMKVFDY+ +K+THSM
Sbjct: 252 GGGKMVYSMESHNKTVTSICVGKVGKESGEEALQYRIFSVALDGYMKVFDYAKMKVTHSM 311
Query: 975 RFPQPLLSIGFSPDCSTRVIGTSNGVIYVGKRKNKETSNVESGVGELIGFSSVPEPQKQV 1154
RFP PL+SIGFSPDC TRVIG+SNG+I+ G+RK KE ES VG SV EPQ++
Sbjct: 312 RFPAPLMSIGFSPDCMTRVIGSSNGIIFAGRRKAKEDVG-ESKVGNFWALGSVEEPQRRA 370
Query: 1155 LRPNNFRYFSRGQNEKPSKVDHVIERPRKPKTAEHDKLLRKFRHKEALVSALNRKEPRSV 1334
LRP FRYF R Q EKP++ DH+I R +K K AEHDKLL+KFRHKEALVS L K +V
Sbjct: 371 LRPTYFRYFHRSQGEKPNEGDHLIMRQKKVKLAEHDKLLKKFRHKEALVSVLGGKNTENV 430
Query: 1335 MAVLEELVARRKLLKCVSNLDIEELGLLMRFLHKYTTMPSYSGFLIGFTKKVLQMHAEDV 1514
+AV+EELVARRKLLKCV NLD EELGLL+ FLHK++TMP +SG L G T+KVL+M AED+
Sbjct: 431 VAVMEELVARRKLLKCVVNLDDEELGLLLGFLHKHSTMPRHSGLLTGLTRKVLEMRAEDI 490
Query: 1515 NASDVLKWHVRQLKLSVEEEIHTHQSLQEIQG 1610
ASD LK H+R LK SVEEEI SLQEIQG
Sbjct: 491 RASDALKGHIRNLKRSVEEEIRIQHSLQEIQG 522