BLASTX nr result
ID: Coptis25_contig00007836
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007836
(842 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004142811.1| PREDICTED: squamous cell carcinoma antigen r... 140 1e-40
ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen r... 162 1e-37
emb|CBI29629.3| unnamed protein product [Vitis vinifera] 160 4e-37
gb|EAZ05376.1| hypothetical protein OsI_27580 [Oryza sativa Indi... 132 3e-35
gb|EEE67928.1| hypothetical protein OsJ_25804 [Oryza sativa Japo... 130 7e-35
>ref|XP_004142811.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Cucumis sativus]
Length = 800
Score = 140 bits (353), Expect(2) = 1e-40
Identities = 81/179 (45%), Positives = 106/179 (59%), Gaps = 15/179 (8%)
Frame = -1
Query: 839 KRKMGARSTEELPTPKRQKGTTHNSTKSFERETSQ-----KSTEDSKVELGKPETMNEQK 675
KRK+G + K+ K + H K E+ +Q T D + + K + +++Q+
Sbjct: 559 KRKLGGDAPNVESPAKKLKDSAHGPKKVTEKGKAQLENVDDQTGDIRGRVKKLDDISDQQ 618
Query: 674 IKYSAPRE--TYTDQCTVFLSNLSFQAKDEHLRDFFSDVGGVTAIRLLRDKLTGKSRGLA 501
+ S + Y DQCT F+SNL+ + +HLRDFF DVGGV AIR+L DK TGKSRGLA
Sbjct: 619 MNDSIQEKGKVYNDQCTAFISNLNLKVTYDHLRDFFQDVGGVVAIRILHDKFTGKSRGLA 678
Query: 500 YVDLADDTHLVAALAKNKQILLGKKVSIARSDPKH--------KKGRESYGRSSSEHDK 348
YVD +DD HL A +AKNKQ+LLGKK+SIARSDPK G+ RSS E K
Sbjct: 679 YVDFSDDAHLEAGVAKNKQLLLGKKISIARSDPKKGGHGTDKAGAGKRFESRSSKESHK 737
Score = 53.1 bits (126), Expect(2) = 1e-40
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 3/51 (5%)
Frame = -2
Query: 235 LNRHGDN-IQLRGRNTFAVPRTVVRTLGRSNNDPK--KESDESPKSNDEFR 92
+ RHG N + L+G+NTFAVPR VR LG + + PK ++ DE PK+NDEFR
Sbjct: 745 VRRHGGNSVDLKGKNTFAVPRN-VRALGWTTDKPKTLEQDDEKPKTNDEFR 794
>ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Vitis vinifera]
Length = 838
Score = 162 bits (409), Expect = 1e-37
Identities = 87/168 (51%), Positives = 112/168 (66%), Gaps = 8/168 (4%)
Frame = -1
Query: 842 QKRKMGARSTEELPTPKRQKGTTHNSTK-------SFERETSQKSTEDSKVELGKPETMN 684
+KRK + T+E P KRQK T N K E + ++ K + KP+ MN
Sbjct: 576 EKRKSTSSRTDEQPPAKRQKDTAQNPKKVDGKGRIELENVVASNEEQELKAKDDKPDDMN 635
Query: 683 EQKIKY-SAPRETYTDQCTVFLSNLSFQAKDEHLRDFFSDVGGVTAIRLLRDKLTGKSRG 507
++++K S + Y DQCT F+SNL +A EHLRDFFSDVGGVTAIR+L+DK TGKSRG
Sbjct: 636 KRQMKGPSHEKNKYLDQCTAFISNLDLEANYEHLRDFFSDVGGVTAIRILKDKFTGKSRG 695
Query: 506 LAYVDLADDTHLVAALAKNKQILLGKKVSIARSDPKHKKGRESYGRSS 363
LAYVD +DD HL AA+AKNK++L GK++SIARSDPK K + S RS+
Sbjct: 696 LAYVDFSDDAHLAAAVAKNKKMLRGKRLSIARSDPKQKGKKGSAYRSN 743
>emb|CBI29629.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 160 bits (404), Expect = 4e-37
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 8/158 (5%)
Frame = -1
Query: 842 QKRKMGARSTEELPTPKRQKGTTHNSTK-------SFERETSQKSTEDSKVELGKPETMN 684
+KRK + T+E P KRQK T N K E + ++ K + KP+ MN
Sbjct: 576 EKRKSTSSRTDEQPPAKRQKDTAQNPKKVDGKGRIELENVVASNEEQELKAKDDKPDDMN 635
Query: 683 EQKIKY-SAPRETYTDQCTVFLSNLSFQAKDEHLRDFFSDVGGVTAIRLLRDKLTGKSRG 507
++++K S + Y DQCT F+SNL +A EHLRDFFSDVGGVTAIR+L+DK TGKSRG
Sbjct: 636 KRQMKGPSHEKNKYLDQCTAFISNLDLEANYEHLRDFFSDVGGVTAIRILKDKFTGKSRG 695
Query: 506 LAYVDLADDTHLVAALAKNKQILLGKKVSIARSDPKHK 393
LAYVD +DD HL AA+AKNK++L GK++SIARSDPK K
Sbjct: 696 LAYVDFSDDAHLAAAVAKNKKMLRGKRLSIARSDPKQK 733
>gb|EAZ05376.1| hypothetical protein OsI_27580 [Oryza sativa Indica Group]
Length = 838
Score = 132 bits (331), Expect(2) = 3e-35
Identities = 79/185 (42%), Positives = 106/185 (57%), Gaps = 18/185 (9%)
Frame = -1
Query: 842 QKRKMGARSTEELPTPKRQKGTTHNSTKSFERETSQKSTEDSKVELG-----KPETMNEQ 678
QKRK T++ P K++K NS + S++ V+ G K + E
Sbjct: 589 QKRKSSKIPTKQQPPAKKKKDNPPNSAVLSDDHGSKEQISTGHVKTGEVSGEKTQASMEV 648
Query: 677 KIKYSAPRET----------YTDQCTVFLSNLSFQAKDEHLRDFFSDVGGVTAIRLLRDK 528
+ + RE Y+D+CT ++SN+ A +EH+R FFSD+GGVTAIRLLRDK
Sbjct: 649 NLVDGSRRENTASKESKSNFYSDKCTAYMSNIDLTANEEHIRRFFSDIGGVTAIRLLRDK 708
Query: 527 LTGKSRGLAYVDLADDTHLVAALAKNKQILLGKKVSIARSDP-KHKKGRE--SYGRSSSE 357
T KSRG+AYVD +D+ HL AA+ KNK LL KKVS+ARSDP K KK RE S+ + +
Sbjct: 709 FTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLAKKVSVARSDPSKGKKNREAGSFSKDQAT 768
Query: 356 HDKRG 342
RG
Sbjct: 769 SGDRG 773
Score = 43.5 bits (101), Expect(2) = 3e-35
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -2
Query: 220 DNIQLRGRNTFAVPRTVVRTLGRSNNDPKKE-SDESPKSNDEFRN 89
D + G+NTFA PR+VV+ LG + D K + E KSN+EFRN
Sbjct: 789 DKPTITGKNTFAAPRSVVKPLGWTQKDEKSDVGAEELKSNEEFRN 833
>gb|EEE67928.1| hypothetical protein OsJ_25804 [Oryza sativa Japonica Group]
Length = 847
Score = 130 bits (327), Expect(2) = 7e-35
Identities = 80/189 (42%), Positives = 107/189 (56%), Gaps = 22/189 (11%)
Frame = -1
Query: 842 QKRKMGARSTEELPTPKRQK-------------------GTTHNSTKSFERETSQKSTED 720
QKRK T++ P K++K T H T E +Q S E
Sbjct: 598 QKRKSSKIPTKQQPPAKKKKDNPPKSAVLSDDHGSKEQISTGHVKTGEVSGEKTQASMEV 657
Query: 719 SKVELGKPETMNEQKIKYSAPRETYTDQCTVFLSNLSFQAKDEHLRDFFSDVGGVTAIRL 540
+ V+ + E ++ K + Y+D+CT ++SN+ A +EH+R FFSD+GGVTAIRL
Sbjct: 658 NLVDGSRRENTASKESKSNF----YSDKCTAYMSNIDLTANEEHIRRFFSDIGGVTAIRL 713
Query: 539 LRDKLTGKSRGLAYVDLADDTHLVAALAKNKQILLGKKVSIARSDP-KHKKGRE--SYGR 369
LRDK T KSRG+AYVD +D+ HL AA+ KNK LL KKVS+ARSDP K KK RE S+ +
Sbjct: 714 LRDKFTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLAKKVSVARSDPSKGKKNREAGSFSK 773
Query: 368 SSSEHDKRG 342
+ RG
Sbjct: 774 DQATSGDRG 782
Score = 43.5 bits (101), Expect(2) = 7e-35
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -2
Query: 220 DNIQLRGRNTFAVPRTVVRTLGRSNNDPKKE-SDESPKSNDEFRN 89
D + G+NTFA PR+VV+ LG + D K + E KSN+EFRN
Sbjct: 798 DKPTITGKNTFAAPRSVVKPLGWTQKDEKSDVGAEELKSNEEFRN 842